Rhinichthys klamathensis goyatoka (western speckled dace): 130075488
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Entry
130075488 CDS
T09701
Symbol
srsf5b
Name
(RefSeq) serine and arginine rich splicing factor 5b
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03040
Spliceosome
rkg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130075488 (srsf5b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130075488 (srsf5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rkg03041
]
130075488 (srsf5b)
Spliceosome [BR:
rkg03041
]
Common components
Common spliceosomal components
SR proteins
130075488 (srsf5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_occluded
RRM_5
SET_assoc
DUF7376
Motif
Other DBs
NCBI-GeneID:
130075488
NCBI-ProteinID:
XP_056096076
LinkDB
All DBs
Position
Unknown
AA seq
278 aa
AA seq
DB search
MSGCRIFIGRLNPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGGRGGGGGGSGGGGGRFPGRYSRGSQDSRRNPPPMRTENR
LIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASHNDLKNAMEKLSGKEI
NGRKIKLVEASRKKSRTRSRSNSSSRSRSRSRGRSASRSRSRSRSHSPKSHNHSRSRSRS
ASPSPVRPKEAARAESASPPTPAQRPPPSRSPSADSRH
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgagtggttgtcgtattttcatcggtcgattaaacccctctgctcgggagaaggacgtc
gagcggttcttcaagggttatggaagaatcagagatattgacctgaaaagaggcttcgga
tttgtggaatttgatgatccaagagatgcagaagatgctgtttatgagcttgatgggaag
gagctctgcaatgagagagtgactattgaacatgctcgtgtccgcctgcgtgggggccga
ggtggtcgtggtggcggtggtggaggtagtggtggcggtggaggacgtttccctggtcgg
tatagccgtggttcccaggacagccggaggaaccctccaccgatgcgcacggagaatcgt
ctcattgtggagaatttgtcgtcaagagtcagctggcaggatttaaaggatttcatgaga
caagctggagaggttacttttgcagatgcccatcggccaaagcttaatgaaggtgtggtt
gagtttgccagccataatgatctaaaaaatgccatggagaagttgtctgggaaagagatc
aatggaaggaaaatcaaacttgttgaggcgtccaggaaaaaatccagaactcggtctcgc
tcaaatagctcatctcgatctcgttctcgttcacgagggcgttccgcatcacgttctcgt
agccgctcccgttcccacagccccaaatcacataaccactcaagaagtcggtcccgttca
gccagtccctctcctgtgcggcccaaggaagcagcgcgtgctgaatccgcatccccgccg
accccagcgcagcgccccccgccgtctcgttccccgtccgctgacagccgtcattag
DBGET
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