Rhinichthys klamathensis goyatoka (western speckled dace): 130075705
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Entry
130075705 CDS
T09701
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
rkg01001
]
130075705
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130075705
Enzymes [BR:
rkg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
130075705
Protein kinases [BR:
rkg01001
]
Serine/threonine kinases: Other
Other
130075705
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
130075705
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WD40
ANAPC4_WD40
Beta-prop_WDR19_1st
LisH
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
130075705
NCBI-ProteinID:
XP_056096432
LinkDB
All DBs
Position
Unknown
AA seq
1541 aa
AA seq
DB search
MASGDGGGVDSKAELSALLEQWEREQQAGSGELLNILTKISDLVERETEEYHKADPDPFD
DRHPGRADPECMLGHLLKILFKNDDFMNALVNSYVMSSREGSLNTAACRLLLNIMPGLET
AVVFQEKDGIVERLFKWAQEADQPLRIYATGLLAGAMENQDIAANYREENSVLVPLMLQR
LRELQDKESESRRDGKRPSKSLAPLLPLDEETVDGEFAPSVPSALPESPDAEPVCALRSL
GRSNTGMKGLMKPASAVPPEESEAPLEGLRSWRKRENGGKVKQKLNFSMPEPERSFSELS
NSSWSEMSPWVIGNNYHLFPLTPGIEQRLILQYLTPLGEYQELLAVFMQLGARELLMHYM
DLKQTNDVQLTFEALKYLASLLLHKKFAAEFVAHGGVPKLLEIPRPSMAATGVSLCLYYL
AYNQDAMERVCMLPHSLLAEVVSYTLWLLECSHASGCCHATMFFSICFSFRAVLDLFDKQ
DGLRRLVNLISTLEILNPEDQGALLSDDEIFSSRQTAKHTCMALRRYFEAHLSIKVEQVK
QSLQRTEGGALIHPQPYYKACSYTHEQVVEMVEFLIEFGPARLYWEPAEVFHILSCVQLL
LQLISIACDWRTYYGSKLSDGSHLGLSIGVNGASSKKQRADTVRYALDILSILTVIPKTQ
VLLSENVAVLDESGSSISTVGMSIVLVVAEGEVFVNDAEIQKSALQVIINCVCAPDKRVS
SIGKFISGTPRRRLPQSHRASESVLAKMWNVVQSNNGIKVLLSLLTIKMPITDADQIRAL
ACKALVGLARSAAVRQIISKLPLFSSGQIQQLMKEPVLQDKRSEHVRFCKFAAELIERVS
GKPLLIGTDVSLARLQRANVVAQSRISFPEKELLLLIRNHLLSKGLSDTATALTKEAELP
MGLHALTHASVPPFTPVSVATPPSPAAGIPRTPRLTNGVAARLGGHTPHHLQPRPSTSQA
PPPPSPAVSHHSNGSPLIGRIVFSRERPSPCPAAGGKRPKVLRQKSDHGAFIQSPAMKKQ
LDRHLPSPPSLDSIITEYLREQHARCKNPVTTCPPFSLFTPHQCPEPKQRRQAPTNFTPR
HTRRVVYPKYGGVDGGCFDRHLIFSRFRPISVFREAEEDESGFMCCAFSARERFLMLGTC
TGQLKLYNVFSGQEEASYSCHSSAITHLEPSRDGSLLLTSASWSYPLSALWGMKSVFIMK
HSFLDDHYVEFSKLSQDRVIGTKEHIAHIYDIQTGQKILTLNNPDLANNYKRNCATFNPT
DDLVLNDGVMWDVRTSQAIHKFDKFNMNISGVFHPNGLEVIINTEIWDLRTFHLLHTVPA
LDQCRIVFNNNGTVIYGAMLQADDEDDMMEQQMKSPFGSSFRTFDATDYKPIATIDVKRN
IFDLCTDTKDCYLAVIENQDSINMDTVCRLYEVGRQRLAEEEEDEEEQEEDDQDEDDDDD
SDDDIDDIDTDPLLAELNENNGEEDGEHDFSPSDDEEVARLLDEEADEDDDDDDDDDDDD
DEDDDDDDSDDNERDVELVLDNTDSSDNSDLEDDIILALNE
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctggtgacggaggcggggtggactctaaagcggagctcagtgctctcctggag
cagtgggagagagaacagcaagcgggatccggagaactgctcaacatactgaccaagatc
tcggatctggtggagcgggagacggaggagtatcacaaggcggatccggacccgttcgac
gaccgccacccaggacgggcagatccagagtgcatgctgggacacctcctgaaaatcctg
ttcaagaacgatgacttcatgaatgcgctggtgaactcgtacgtgatgagcagtcgagag
gggtccctgaacaccgccgcctgcagactcctgctgaacatcatgccgggcctcgagacc
gctgtggtcttccaggagaaggacggtatagtggagcgcttgtttaaatgggcccaggag
gcggatcagccgctcaggatctacgccacaggcctgctagccggagccatggagaaccag
gacatcgccgccaactatcgcgaggagaactctgtgctggttcctctcatgctgcagaga
ctgagggagcttcaggataaggagtcggagagccggagagacggcaagcgtccgagcaag
agtctggctcctctgctcccgctggacgaggagaccgtggacggagagttcgctcccagc
gttcccagcgctctgccggagagcccggacgccgagcccgtgtgtgcgctgaggagcctg
ggccgctccaacacgggcatgaaaggcctgatgaagccggcgtctgctgtgccgccggag
gagagcgaggcgccgctggagggcttgaggagctggaggaagagggagaacggagggaag
gtgaagcagaagctgaacttctccatgccggagccggagcgcagcttcagtgagctgtcc
aacagcagctggtctgagatgagcccgtgggtcatcgggaataactatcacctgttcccg
ctcacgccggggatcgagcagcggctgatcctgcagtacctcaccccgctgggggagtac
caggagctgttggctgtgttcatgcagctcggcgcccgagagctgctgatgcactacatg
gacctgaagcagaccaacgacgtccagctcacgttcgaagcgctgaagtatcttgcatct
ctgctcctccataagaagtttgctgccgagttcgttgcgcacggaggagtgccgaagctg
ctggagatcccccggccctcgatggctgccaccggcgtgtctctgtgcctctactacctc
gcgtacaaccaggacgccatggagcgggtgtgtatgctgccgcactcgctgctggcggag
gtggtgagctacacgctgtggctgctcgagtgctcccacgcctccggctgctgccacgcc
accatgttcttctccatctgcttctccttcagagccgtgctcgacctcttcgacaagcag
gacggcctgcgccggctcgtcaacctgatcagcacgctggagatcctgaaccccgaggac
cagggcgcgctgctgagcgacgacgagatcttctccagccggcagacggccaagcacacc
tgcatggccctgcgcaggtacttcgaggcgcacctgagcatcaaggtggagcaggtcaag
cagtcgctgcagaggaccgaggggggcgcgctcatacacccacagccctactacaaggcg
tgctcctacacacatgagcaggtggtggagatggtggagttcctgatcgagttcgggccg
gcgcgcctgtactgggagcccgccgaggtcttccacatcctgtcctgcgttcagctcctg
ctgcagctcatctccatcgcctgcgactggaggacctactacggcagtaaactttctgat
ggcagtcatcttggactttctatcggtgtgaatggagcatcatccaaaaagcaaagggct
gacactgtgcggtacgcgctggacatcctgagcattctgacggtcatccccaagactcag
gttctgctgtcggagaacgtggcggtgctggacgagagcggctcctccatctccactgtc
gggatgagcatcgtgctggtcgtcgccgagggggaagtattcgtaaacgacgccgagatc
cagaagtcggccctgcaggtgatcataaactgcgtctgcgctccggacaagcgcgtctcc
agcatcggcaagttcatctcgggaacgccacgccggcgtctgccgcagagccaccgcgcg
agcgagagcgtgctagccaagatgtggaacgtggttcagtccaacaacgggatcaaagtc
ctgctgtccctgctgaccatcaagatgcccatcactgatgctgaccagatccgcgcgcta
gcgtgcaaagccttggttggattagcacgtagcgccgcggtacggcaaatcattagcaag
cttccgctattcagcagcggtcagatccagcagctcatgaaggagccggtgcttcaggac
aagcgtagcgaacacgtgcgcttctgcaagtttgcagcagagctaatcgagcgagtgtcc
gggaagcctttgttgatcggcactgacgtgtcgttagcgcggctgcagagagctaatgtc
gtggcgcagtcgcgcatctcgtttccagagaaggaactacttctgctaattcggaatcat
cttttatctaaaggtctttcggacacggctacggctttaacgaaggaagctgagcttccc
atggggctacatgcgctaacacatgctagcgtgccgccgttcactcccgtttctgtggcc
acacctccttctcctgccgccggcatccctcggactcctcggctcactaacggagttgcg
gctcgtttgggtggccacacccctcatcacctgcagccccgcccctcgacctcacaggct
ccgcccccaccgtcgcctgccgtttctcaccacagcaacggctctccgctaatcgggcga
atcgtgttctcgcgggagcgcccgtcaccgtgtcccgccgctggagggaagaggccgaaa
gtgctgaggcagaaatcagatcatggcgcttttattcagagtccggctatgaagaagcag
ctggaccgacatctgccctctccaccttctctagacagtataataacggagtatttgcgc
gagcagcacgcgcgctgcaagaacccggtgacgacgtgtcctcccttcagcctgttcacg
cctcatcagtgtcccgagcccaagcagagacgccaggcgcccaccaacttcaccccgcga
cacactcgccgggtcgtgtaccccaaatacggcggagtggacggaggctgcttcgacagg
catctcatcttcagcaggtttcggccgatctcggtgttcagggaggctgaggaggatgag
agtggcttcatgtgttgtgcgttctcggcgcgagagcggttcctgatgttgggcacgtgc
accggccagctcaaactctacaacgtgttcagtggacaagaggaggccagttacagctgc
cacagctcagccatcacacacctcgagccctccagagacggctcgctgctgttgacgtca
gcatcttggagttacccgttatcagcgctgtgggggatgaagtctgtgttcatcatgaag
cattcattcctggatgatcattatgtggagttcagcaaactctctcaggacagagtcata
ggaaccaaagagcacatcgcacatatatatgacatccagacaggacagaagatcctgacc
ctcaataaccccgacctggccaacaactacaagcgcaactgtgccacgtttaaccccaca
gacgacctggtcctgaacgacggggtcatgtgggacgtgcgcacatcgcaggccatacac
aagttcgacaagttcaacatgaacatcagtggcgttttccatcccaatgggttagaggtc
atcatcaacacggagatctgggatttgaggacgtttcatctcctccacaccgtaccagcg
ctggatcagtgcaggatcgtgttcaacaacaacggaaccgtcatttatggagccatgttg
caggctgacgatgaggatgacatgatggagcagcagatgaagagccccttcggatcctcc
ttcaggaccttcgatgccaccgactacaaacccatcgccaccattgatgtgaagaggaat
attttcgacctgtgcacagacaccaaagactgctatctggccgtcatcgagaatcaggac
tcgataaacatggacactgtgtgtcgtctgtatgaggtgggccgccagagactcgctgag
gaggaggaggatgaggaagagcaggaggaggacgaccaggacgaagacgacgacgacgac
tctgatgatgacatcgatgacatcgacaccgacccgctgctggccgagctgaacgagaac
aacggcgaggaggatggagagcacgacttctccccgtccgatgatgaggaggtggcgcgc
ctcctggatgaagaggctgacgaggacgacgatgacgacgacgacgacgacgacgatgat
gatgaagacgacgatgatgatgattctgatgataatgagcgagatgtggagcttgtgctg
gacaacacggacagctctgataactcggacctggaggacgacatcatcctcgccctgaac
gagtga
DBGET
integrated database retrieval system
