Rhinichthys klamathensis goyatoka (western speckled dace): 130075745
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Entry
130075745 CDS
T09701
Symbol
fdft1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg00100
Steroid biosynthesis
rkg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
130075745 (fdft1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rkg01006
]
130075745 (fdft1)
Enzymes [BR:
rkg01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
130075745 (fdft1)
Prenyltransferases [BR:
rkg01006
]
Terpene biosynthesis
Squalene/phytoene synthase
130075745 (fdft1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
GST_C_8
Octopine_DH
GBP_C
Motif
Other DBs
NCBI-GeneID:
130075745
NCBI-ProteinID:
XP_056096487
LinkDB
All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
MAGVCGKSAVSLSVLKRSFSLQRGCPWPVLAGARRGALEGRLMAVPPHPFRAHRHPAYVC
FSCQDSMTETLRTCYSYLNQTSRSFSAVIQALDGELRHAVCIFYLVLRALDTVEDDMTIP
LEKKVPLLHDFHSFLYQPDWSFSESREKDRQVLEDFPTISVEFRNLGQEYRDVISDICHR
MGAGMAEFLEKKVASMKEWDKYCHYVAGLVGIGLSRLFSASQLEDAEVGRDTELANSMGL
FLQKTNIIRDYLEDQQQGRAFWPQEAWSQFASRLEDFAQPQNLSSALSCLNLLVTDALRH
VPDVIAYLSRLRNQSVFNFCAIPQVMAIATLSACYNNPQVFQGVVKIRKGQAVTLMMQAT
NMGAVQSIIAQYSQEILQKVSITDPSREQTLCVLNLIREKSVSRAALTPRAHHISPVCVS
AAMILAALSWQYLNATAGPAGGADVQGH
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggctggtgtttgcgggaagagcgccgtgtcgctgtccgtgctcaagcgctcgttctcg
ctgcagcgcgggtgcccgtggcctgtgctcgcgggtgcgcggcgcggcgcgctggaagga
cggttaatggcggttcctcctcacccgttcagggctcatcgacaccccgcttatgtgtgc
ttctcctgccaggactcgatgactgaaaccctgcggacctgctattcgtatctgaaccag
acaagccggagtttctccgcggtgatccaggccctggatggagagttacggcatgccgtg
tgtattttctacctggttcttcgagccctggacacggtggaagacgacatgaccatcccg
ctggagaagaaggtcccgctgctgcacgacttccactcgttcctctatcagcccgactgg
agcttcagcgagagccgagagaaagaccggcaggtcctggaggatttccccacgatttca
gtggagttcaggaatttgggccaagagtatcgggacgtcatttcagacatctgtcaccgg
atgggtgcgggaatggctgaattcctggagaagaaagtcgcttcaatgaaggagtgggac
aaatactgtcattatgtggcgggtctggtggggatcggactgtcccgactgttttcggcg
tcccagcttgaggacgctgaggtgggccgggacacagagctggccaactccatgggtctg
ttcctccagaagaccaacatcatcagggactatctggaggaccagcagcagggacgggcc
ttctggccacaggaggcctggagtcagtttgcgtcccgtctggaggattttgcccagcct
caaaacctgagctctgccctgtcctgcctcaacctgctggtgaccgacgcccttcgccac
gtccctgatgtcatcgcgtacctgtcccgcctccgcaaccagagcgtcttcaacttctgc
gccattcctcaggtgatggcgatagcgactctgtctgcgtgctacaacaatcctcaggtg
ttccagggcgtggtgaagatccggaagggtcaggcggtgacgctcatgatgcaggccaca
aacatgggcgccgttcagagcatcatcgcacagtacagtcaggagatcctgcagaaagtc
tccatcacggatccgtcccgggaacaaacgctgtgtgtcctgaatctgatccgtgagaag
agtgtgtcccgagcagcgctgacgccccgagcgcatcacatctctccggtgtgtgtgtcg
gcggcgatgatcctggcggccctcagctggcagtacctgaacgccaccgcggggccagca
gggggcgccgacgtgcaggggcactga
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