Rhinichthys klamathensis goyatoka (western speckled dace): 130075818
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Entry
130075818 CDS
T09701
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein-like isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130075818
03036 Chromosome and associated proteins [BR:
rkg03036
]
130075818
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130075818
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Gene silencing
piRNA pathway
130075818
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
130075818
NCBI-ProteinID:
XP_056096557
LinkDB
All DBs
Position
Unknown
AA seq
1783 aa
AA seq
DB search
MAPIRDSVSHSPNQTGLEHAGLEPQYESSPWSSGSPCSDSNSNWGKVIVDKGPWPSITGS
DPELASECMDADSASSSGSEKNLSMMPSESTGGDNNGNRQGSHFMVANGSNNVGNGSVKG
PWGVSNGSMLSTCQGSGDGPSGKLAESSHGKINAWGTQVSSTNIGINPSTLNPIANHGAW
PVLQSTGPNPHGPVGNGNGGTNTQQSTIGQTPSMQSINSKMSWGCLQLSETEVNGTNKVP
SGQTQNLNTEFNGPNNTTNSMTSSLPNSTGSMQINEQPPGHRAWPMSTGGSPQLPISPVS
NGTSISQHGNSEGINSGSYGTAWGATPSTNYSGDKCPIPKGQAVGDTVNATLMQSGANSS
SVSAALKNNNNNGMGGRERGWDSTPGTSQSMSWGAGNGVGPAGIPRPWGSASSSSSSSSS
SSNTGTKVSNGEWNTLPSNSQHSNDSTNGSRKGTNGWKSLEDDALGIGSSSQALQGSTWN
KSTGSEGSGESSGGRSERDGQRGGNRRRGNQQGMVNAALSRIDVDPRVLSNTGWGQTPVR
QNTVWDVSTSDKKTGCGQTGWGSAPPQVSNSGRWGDGPSTNKSSDSSVSGWSESKPLTGW
GETKSPVGQNGWEDAPSVTMNKGGSSWNSTKDEKSSWNNAPKAKQGWGSAGEGWGGEGPK
GNHWVEPQKSGSGGCDSDSDRSGSGWSEPGRSGTSNIWGGSGGNNTPDQSGPATGWRDPP
KTNNQNQTWGEPIKPSHSNPAWGDNTKTNNSSEWVKSQDSSMGTYRSGNTSQTGAPSQNK
PTGWQGGPIPAASKEESSTGWEEPSPESIRRRMDIDDGTSAWGDPNKFNSSNVNMWNKNN
AGEQDGMAVCQPPQAQSSMAPKEKNCSSGWGETYCGPQKNESSTWGEHAASPVTVDNGTS
AWGKPVDTGSSWEGPGRENSGGSSWGNAAVGQQSQHKSGSKPMQDWYGEQNSMAGHSNLE
EEEQVKIGMWNNSSSQEMNQTGNWSYKKMPPKLNKGPNKQDDSQWMNPFVKQFNNMYPRD
SAEDSMKSNKMDMSGGMTDKRIDVDKHVLNMGEYGKNPASRHQIHKDSPIDRNPYMDKNV
NMYSVGNAAAQGRNAQQPPAQPLNSTQPTLRNQVPPPLLPSQVPPPLLKYSPNNGGLNPL
FGPQHVAVLNQLSQLNQLSQINQLQRLLLQQKAQTQRAMPVNSRQQQEQQGRGLGLSQQM
IQTPRHLDPSQMKQQTSPQPPSLHQPSLKSYMENFMPPNASDLQKEQSSLSSFSNFPLGG
CPPHLNIGQTDSMLHQAAKPNSMFASDMSSYLPAGISQSHSLLAPPMSNGHMVQGSPINP
WVGKNFCPDSSSLPARGLNSNLNVSNLDISSVGFKEPQSRLKKWTAMDISVNSPLDQNPS
KSGAIPSGLRLEDSPFGPYDFMNASNTPISPPGSVGDGWPSRAKSPHGSTNVNWPPEFRP
GEPWKGYPNIDPETDPFVTPGSVINNLSINTVRDVDHLRDRNNGPSSSLNTTLPSNSAWT
SIRASNHNSSLSSTAQSTSARNSDSKWSPGTVTNTSLAHELWKVPLPSKGISAPSRPPPG
LTGQKQPSSWDNGSLRLAGWGGSESRFNSSSSWGDSSSGRTNWLVLKNLTPQIDGSTLRT
LCMQHGPLITFHLNLPHGNAVVCYSSKEEAAKAQKSLHMCVLGNTTILAEFASEEEINRF
FAQGQSMTASPSWQTLGSSQNRIGSIEGSHPFPNRTDPNHWNGSGLAGAGSGDLHGSSLW
GVPNYSTSLWGSPSGGEGGRINSPSPISSFLPVDHLMGGGESM
NT seq
5352 nt
NT seq
+upstream
nt +downstream
nt
atggctcccattcgggattctgtcagccactcccctaaccaaacaggtttggaacatgct
ggtctggaacctcagtatgaaagttcaccatggagctctggctcaccttgcagcgactca
aacagcaactggggaaaagtaattgttgataagggaccctggccctctatcactggtagt
gacccagagttagcctcagaatgtatggatgctgactctgcctccagctctgggtcagaa
aaaaatcttagtatgatgccgtctgagagcactgggggtgacaacaatggcaatagacaa
ggttctcatttcatggttgcaaatggcagcaataatgtgggtaatgggagtgttaagggg
ccttggggtgtatccaatggctcaatgctaagcacatgtcaaggctccggagatggcccc
agtggcaagctggcagaaagcagccatggcaaaataaatgcatggggtacccaagtttcc
tcaaccaatataggtataaatccaagcactttgaacccaattgccaaccatggtgcctgg
cccgttcttcagagcactgggcccaatccccacgggccggtggggaacggaaatggtggc
accaacactcaacaaagcaccataggtcaaacacccagcatgcagagtatcaactctaag
atgtcctggggatgcctgcagctgtccgaaactgaagtcaatggtacaaacaaggttcca
agtgggcagactcaaaaccttaacactgaatttaatggaccaaataacactactaactcg
atgacctctagtttaccaaactctacaggttcaatgcagataaatgaacagcccccaggg
caccgagcttggcctatgagtacagggggctcccctcagctccctatttctccggtctct
aatggcacttccatttctcaacacggcaacagtgaggggattaacagtgggtcttacggt
acagcatggggcgctacgcccagcactaattactctggagacaaatgtcccatccctaaa
ggccaagctgtgggcgacactgtgaatgcaactctaatgcagtctggagccaacagttcc
tctgtgagtgctgctttaaagaataataataataacgggatgggcggtcgtgaaagaggt
tgggactcaacccccggtacctcacaaagtatgtcttggggagcaggtaatggtgtgggc
ccagctgggatccctcgcccctgggggagtgcctcttcctcttcttcctcttcctcatcc
tcttcaaacactggcactaaggtctcaaacggggagtggaacactttgcccagcaacagt
cagcattccaatgatagcacaaatggaagcagaaagggaactaatggatggaagtctttg
gaggatgatgctcttggtatagggagctctagtcaagcgttgcaaggcagcacgtggaac
aaatctacaggcagtgaaggtagcggagagagctcgggaggtcgcagtgagagggacggg
cagcgtggtggcaaccgacggaggggaaatcaacaagggatggttaatgcagctctctct
agaattgacgtggaccccagggtgctgtccaacactggatggggacaaactccagtccgc
cagaacactgtctgggatgtttcaacctccgataaaaagacaggatgtggacagacaggc
tggggcagtgctccccctcaggtatctaactcaggtcggtggggagatggacccagcacc
aacaaaagtagcgattcttcagtgtctgggtggtctgaatcgaaacctttaactggctgg
ggagaaaccaaaagcccggttgggcaaaatggatgggaggatgccccttctgttacaatg
aacaaaggcggttcctcatggaatagtaccaaggatgagaagtcctcttggaataatgcg
ccgaaggcaaagcaaggctggggctctgctggagagggatggggtggagaaggcccaaag
ggaaaccattgggtagaaccccagaagtctggttcaggtggctgcgacagcgacagcgac
cgctctggatcgggctggagcgagcctgggcgctccgggacaagcaacatctggggaggc
agtggaggcaacaacactcctgaccagagtggtccagccacaggatggagagacccacca
aagaccaacaatcaaaaccaaacctggggcgagccaatcaaaccaagccactccaaccct
gcttggggtgataacacaaaaacgaacaactcttcagaatgggtcaagtcccaagattcc
agcatgggaacgtacaggagtgggaacacctctcagactggagcccctagtcagaacaag
cctacaggatggcaggggggcccaatacctgctgcctccaaagaagaatcatccactgga
tgggaagagccatcgcctgaatccatcaggcgcagaatggatattgatgatggtacttca
gcatggggagatcccaacaaatttaactctagcaacgtaaatatgtggaacaagaacaat
gctggagagcaggatggcatggctgtttgtcaacccccacaagcccaaagctccatggct
ccaaaggaaaagaactgcagctcagggtggggagagacgtattgtgggccacaaaaaaat
gagtcctctacctggggtgagcatgctgcttcacctgtcactgtggacaatggcacatct
gcttggggaaagcctgttgatacaggttccagctgggaagggccagggagggaaaactca
ggaggcagtagctggggcaatgctgctgtaggacagcagtcacagcacaagtctggatcc
aaacctatgcaagactggtatggagagcagaattctatggcagggcactccaacttggag
gaggaagagcaagtaaagataggcatgtggaacaacagttcatcacaggaaatgaaccaa
actggtaactggtcctacaagaagatgcctccaaagctgaacaaaggacccaacaagcaa
gatgattctcaatggatgaatccgtttgtgaaacagttcaacaacatgtaccctagggat
tctgctgaagattccatgaagagcaataagatggatatgtctggaggaatgacagacaag
cgcattgatgttgacaagcatgttcttaatatgggagagtacggaaaaaatcctgcttca
cgtcaccagatccacaaagattctcccatagaccgcaatccctatatggataagaatgta
aacatgtacagtgtcggtaatgcggcagcacaaggccggaacgcccagcagcctccagca
caacctctgaactccactcagcccactctacgcaaccaagtgcctcctccactacttccc
tctcaggttcctccacccctgttgaagtactctcccaataatggaggtctgaaccctctg
tttggcccacagcatgtggctgtgctgaaccagctgtctcaactcaaccaactgtctcag
attaatcagttacagcgtctccttttgcagcaaaaagctcaaacccagagggccatgcct
gttaacagccgccagcaacaggaacagcagggtcgtggtttgggtctgtcccagcaaatg
atccagactcctcgccatctcgatccctcccagatgaagcaacagacttcccctcagcca
ccctcactgcaccaacccagcctcaagtcctatatggagaacttcatgccccccaatgcc
tctgacctgcagaaagaacaaagttccttgagctcgttcagtaatttccctttaggtggg
tgtcctccccatcttaatataggccagactgactctatgttgcaccaagctgccaagccc
aactcaatgtttgcatctgacatgtcaagctatctgccagctggcattagtcaaagtcat
agcctcctagccccacctatgagcaatggccacatggtgcaaggctctcccatcaaccct
tgggtaggaaagaacttctgtcctgacagcagctctctgccagcgagaggtttgaactca
aacttgaatgtaagcaaccttgacattagtagtgttggttttaaggagccacagtcccgt
ctgaagaagtggactgccatggatatctccgttaactcgccacttgatcaaaaccccagc
aaatctggtgctataccatctggcctgaggcttgaagactcgccctttggtccatatgac
ttcatgaatgccagtaacactcccatcagtcctcctggctctgtgggagatggctggccc
agccgtgccaaatcacctcatggttccaccaatgtcaactggccaccagagttccgtcct
ggtgagccctggaaaggatatccaaacattgatcctgaaactgacccatttgtcactcct
ggcagtgtgattaataatctctccattaatacagtccgggatgttgatcacctcagggac
aggaacaatgggccatcctcatcacttaacaccacgctgccttcaaatagtgcctggaca
tccattcgtgcctccaaccacaatagttccctcagcagtacagcacaaagcacttcagcc
agaaacagtgactccaaatggtctcctggtacagtcaccaacacctctttggctcatgag
ctgtggaaggttcctctcccttcgaaaggcatctctgctccgtcccgccctccacctggc
ctgactggccagaaacagccctcatcttgggacaacggctctctgaggctggcaggctgg
ggtggctctgaatccagattcaactctagttccagctggggtgacagcagctcagggaga
actaattggcttgtactcaaaaacctcacacctcagattgatggctccaccttgcgaact
ctgtgcatgcagcacggtccactgatcacattccatctgaaccttccccatggcaatgct
gtggtctgctacagctctaaggaggaggcggcaaaagcccagaagtcactgcacatgtgt
gttttagggaacactactattcttgcagagtttgctagtgaagaggaaattaatcgtttc
tttgcacaaggtcagtcaatgactgcctctcccagctggcagacgctgggctcttctcag
aatcggatcggatccatcgagggttctcaccccttcccaaaccgcactgatccaaatcac
tggaacggcagcgggctggcaggagctggcagcggagacctgcacggctcgtctctctgg
ggcgttcccaattactccacgagcctgtggggcagccccagtggtggtgagggagggaga
atcaacagtccctcccccatcagctccttccttcctgttgaccatctgatgggaggtggg
gagtccatgtag
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integrated database retrieval system
