Rhinichthys klamathensis goyatoka (western speckled dace): 130075829
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Entry
130075829 CDS
T09701
Symbol
traf7
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRAF7
KO
K10646
E3 ubiquitin-protein ligase TRAF7 [EC:
2.3.2.27
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130075829 (traf7)
Enzymes [BR:
rkg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130075829 (traf7)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
130075829 (traf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WDR55
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
NBCH_WD40
WD40_like
Beta-prop_IP5PC_F
Beta-prop_SPT8
Beta-prop_DCAF4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
Beta-prop_IFT140_2nd
Sina_ZnF
zf-C3HC4_4
zf-C3HC4_3
Beta-prop_EIPR1
Beta-prop_Nup120_160
zf-TRAF
WD40_MABP1-WDR62_1st
zf-RING_5
DUF1664
EzrA
DUF16
Filament
WDR90_beta-prop_4th
DUF4164
DUF641
KxDL
Motif
Other DBs
NCBI-GeneID:
130075829
NCBI-ProteinID:
XP_056096573
LinkDB
All DBs
Position
Unknown
AA seq
673 aa
AA seq
DB search
MSCSKPSHFDRFSEGSVAGATITVTSPDISNWAKMEASFGSTFPAVPQVAKAETNYKQHR
RTPSSTSTLTYSPRDDDDGMPPISTPRRSDSAISIRSLHSESNMSLRSTFSLHEEEEDTE
PLVFAEQPSVKLCCQLCCSVFKDPVITTCGHTFCRRCALTSDKCPVDNSKLTVVVNNIAV
AEQIGELFIHCKYGCRPAASGKPGAFEVDPLGCPFTIKLSTRKDHEVSCDYRPVRCPNNP
NCPPLLTMNLEAHLKECEHIKCPHSKYGCTFIGNQDTYETHLEVCKFEGLKEFLQQTDDR
FHEMQVTLAQKDQDISFLRSMLGKLSEKLDQLEKNLELKFDVLDENQSKLSEDLMEFRRD
ASMLNDELSHINARLNMGILGSYDPQQIFKCKGTFVGHQGPVWCLCVYSTGDLLFSGSSD
KSIKVWDTCTTYKCQKTLEGHDGIVLALCIQGNKLYSGSADCTIIVWDIQTLQKVNTIRA
HDNPVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVASQNHLYSGS
YQTIKIWDIRSLECVHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTG
HVGTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLF
SGAVDSTVKVWTC
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagctgtagtaaaccgtcacactttgatcggttctcagaaggatctgtggcaggtgcc
actatcactgtaacctcacctgacatcagcaactgggccaaaatggaagctagttttgga
tccacgtttccagcagtccctcaagtagcaaaagcggaaaccaattacaaacagcatcgt
agaaccccttcatccaccagcactctgacctactcgcctcgtgacgacgatgatggcatg
ccgcccatcagtacccctcgtcgctcagactctgccatctcgattcgctccctgcactcc
gagtccaacatgtcattgcgctccaccttttccctgcacgaggaagaggaagacacagag
ccgctggtgtttgcagagcagccctcagttaagctttgttgccagctgtgctgcagcgtg
ttcaaggaccccgtcatcacgacctgtggacacacattctgcaggcgatgtgccttgacc
tcagataaatgcccggtggacaactccaagctaacagtggtagtgaataacatagcggtg
gctgagcaaattggtgagcttttcatccactgcaagtacggctgtcggccagctgcctca
ggcaagcccggtgcctttgaggttgacccacttggttgtcctttcaccatcaagctaagc
accaggaaagatcatgaagtaagctgtgactacagacctgttcgctgtcccaacaaccca
aactgccctccactgctcaccatgaacctggaggcccatttgaaagagtgtgaacacatc
aagtgccctcattctaaatatggttgcacctttattgggaatcaggatacatatgagacg
cacctggaggtgtgtaagttcgaggggctgaaggagtttctccagcagactgatgaccga
ttccatgagatgcaggtgacactggcgcagaaggaccaggacatctcgttcctgcgctcc
atgctgggcaaactctctgagaaactagaccagctggagaagaacttggagctcaagttc
gatgtgctggatgagaatcagagcaagctcagtgaagatctaatggagttccgacgagat
gcttccatgctgaatgatgaactgtcccacatcaatgccaggctcaatatgggtatactg
ggctcttatgacccgcagcagatcttcaaatgcaagggtacatttgtgggccaccagggt
ccggtgtggtgtctgtgtgtgtattctaccggtgatcttctctttagtgggtcatcagat
aagtccatcaaggtttgggacacatgcaccacatacaagtgccagaagaccctagagggc
catgatggcatagtgttggcattgtgcattcaggggaacaagctgtacagtggctcagct
gattgcacgatcattgtttgggatatccagaccctgcagaaagtgaacactatccgggca
catgacaaccctgtgtgcactctggtctcctctcacaacatgctcttcagcggctctctc
aaagccattaaggtgtgggatattgtgggcactgagctgaagctaaagaaggaattgact
ggcttgaatcactgggttcgagctctggttgcttctcagaatcatctatacagtggatct
tatcaaaccataaagatctgggacatccgttctctggagtgtgtgcatgtgctccagacc
tctggaggcagtgtgtactccattgcagtcaccaaccaccatatagtttgtggcacttat
gagaacctcattcatgtttgggacattgagtccaaagaacaggtgcggacgcttacgggc
cacgtgggcacagtgtatgccctagccgtcatctccacccctgatcagaccaaagtgttt
agtgcctcctatgatcgctctctcagggtgtggagcatggacaacatgatctgcacccag
actctgctgcggcaccagggcagtgtgacggcgctcgctgtatccagaggaagactgttc
tctggagctgtagacagcacagtaaaggtgtggacatgctaa
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