Rhinichthys klamathensis goyatoka (western speckled dace): 130075852
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Entry
130075852 CDS
T09701
Symbol
smarce1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130075852 (smarce1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rkg03021
]
130075852 (smarce1)
03036 Chromosome and associated proteins [BR:
rkg03036
]
130075852 (smarce1)
Transcription machinery [BR:
rkg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130075852 (smarce1)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130075852 (smarce1)
PBAF complex
130075852 (smarce1)
BRITE hierarchy
Motif
Pfam:
HMG_box
HMG_box_2
GCN5L1
Pcf11_helical
Sarcoglycan_2
DUF447_C
Motif
Other DBs
NCBI-GeneID:
130075852
NCBI-ProteinID:
XP_056096608
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MSKRPPYTPAPTPAPTTQMPTTPGFVGYNPYSHLAYNNYRLGGNPSGNNRNSSGITVPKP
PKPPDKPLMPYMRYSRKVSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLNE
YEAEKIEYNDSLKAYHNSPAYLAYVNAKNRAEAALEEESRQRQSRLDKGEPYMSIQPAED
PDDYDDGFSMKHTAAARFQRNHRLISDILSEVVVPDVRSVVTTARMQVLKRQVQSLMVHQ
RKLEAELLQIEDRHQDKKRRFLESTDSFNNELKRLCSLKVEVDMEKLAAEMAAAEEAARR
RAEEREREAAEQVERAAQEEQQPAGVQANANTEQTSTSETKDGEDKPTPMETETLAEASE
VSQEAEQGTPAAEGEKPAQPEPAEGATDEGTSDSTAPSESSSGPPAEPQASDNTPEERQP
TQTQ
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcggccaccctatacccctgcccccaccccagcccccacaacacaaatgccc
accacccctgggtttgtggggtacaacccatacagccatctggcctacaacaactacagg
ctgggagggaaccccagcgggaacaacaggaactcctcagggatcaccgttcctaagccg
cccaaaccgcccgacaagccgctgatgccctacatgcggtatagccggaaggtaagcagg
aaggtttgggatcaagttaaggcctctaatcctgacctgaagttatgggagattgggaag
atcatcggtggcatgtggagagacctcactgatgaggaaaaacaggactatttaaatgaa
tacgaggctgagaagatcgagtataatgactctttgaaagcctaccacaactctccagcc
tacctggcatacgtcaacgctaagaaccgcgctgaagctgctctagaagaagagagccgg
cagagacagtcgcgcctagacaagggcgaaccctatatgagcatccaacccgctgaggac
cctgatgactatgacgacggtttctccatgaagcatacagcggcagctcgtttccagcgg
aatcaccggctcatcagcgacatcctgagtgaggttgtggtgcctgatgttcgctcagtg
gtgaccaccgctcgcatgcaggtgctcaaacgtcaagtccagtctctcatggtgcaccag
aggaagcttgaagcagagctgcttcaaatcgaggaccgacatcaggataagaagaggagg
ttcctggagagcacagactccttcaataacgagctcaaacggctgtgtagtctgaaagtg
gaggtggacatggagaagctggcagctgaaatggcggctgcagaggaggcggctcgccgg
agggcggaggagagagagcgggaagcagcagagcaggtggagagagctgctcaagaagag
caacagccagctggggtccaggccaatgccaacacagaacaaacctccaccagcgagacc
aaggatggagaagacaagcccaccccaatggagacggagactctggctgaagcttctgaa
gtatctcaggaggctgagcaaggcaccccagctgcagagggagagaaaccagcccagcct
gagcctgcagagggtgctacagatgagggcaccagcgacagcaccgctccgtctgagagc
agctccggacccccagcagaaccccaggcctcagacaacacccctgaggagcggcagccc
acccagacccaataa
DBGET
integrated database retrieval system
