Rhinichthys klamathensis goyatoka (western speckled dace): 130076029
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Entry
130076029 CDS
T09701
Symbol
u2surp
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130076029 (u2surp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rkg03041
]
130076029 (u2surp)
Spliceosome [BR:
rkg03041
]
Complex A
U2 snRNP components
U2 related factors
130076029 (u2surp)
Complex B
130076029 (u2surp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
SET_assoc
RRM_7
Motif
Other DBs
NCBI-GeneID:
130076029
NCBI-ProteinID:
XP_056096889
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MADKTPGGAQKANSKALLESKLKAFSIGKMAVAKRTLSKKEQDELKKKEDERAAAEIYEE
FLAAFEGGEGKVKTFVRGGIANATKEEAAVDEKKGKLYKPKSRVLEAKNFLPLDTPPQFL
AIDKRNASKKGDKEKKKSNLELFKEELKQIQEERDERHRLKGRVSRFEPLPTLEGKRSSD
GSSRRNRPSSVLDDSAPGSHDVGDPTTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIM
WPRTDEERARERNCGFVAFMTRRDAERALKNLNGKMIMNFEMKLGWGKGVPIPPHPIYIP
PSMMEHTLPPPPSGLPFNAQPKERLKNPNASMPPPPKCKEEFEKTLSQAIVKVVIPTERN
LLSLIHRMIEFVVREGPMFEAMIMNREINNPLYRFLFENQSPAHVYYRWKLYTILQGESP
TKWKTEDFRMFKNGSFWRPPPLNPYLHGTPEEEERDDDDDEESGKKGTLKDDERDKLEEL
LRGLTPRKSDIADGMFFCLTHADAAEEIVECIAESLSILKTPLPKKIARLYLVSDVLYNS
SAKVANASYYRKFFETKLCQIFSDLNATYKTIQGHLQSENFKQRVMSCFRAWEDWAVYPD
PFLIKLQNIFLGLVSLDPEKEIEELVPELPERTEDIDGAPIVEEELDGAPFDDVDGMPID
GAPIDGAPLDDLDGMPIKGTDDDLDGIPFDQKPGFKVAPSKWEAVDGAALEAQAVTTSKW
EIFDLPDESEKSKSSSTREAESKDTLRGSSAAEQQSYSNPVREEYDSKSAKFFEMSEEKR
AKLREIELKVMKFQDELESGKRPKKSGQSIQEQVELYRDKLLQREKEKETEKDKEKEKEK
ERKDKDKSDVSHKEKDKDDSTPGRKEKLFIYRKRRHSPSPSPTRSSSSRRGRSPSPRSER
SDRSYTKDSSRLSYKDSPRDSNRKSSKRSPSPPRTPKRSRRSRSRTPKKSSKKSRSRSRS
PHRSHKKSKKSKH
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaaacgccaggtggggcgcagaaagccaactctaaggctttattggaaagt
aagttaaaggcctttagtatcggcaagatggcggttgctaaaagaacactaagtaagaaa
gagcaggatgaactcaagaaaaaggaggatgaaagggcagctgcggagatctacgaagaa
tttctcgctgcgtttgagggaggtgaaggaaaagtgaagacgtttgtacggggtgggatt
gctaatgccactaaagaggaagcggcagtcgatgaaaaaaaaggaaagctctacaaaccg
aagtcaagagttttggaggctaaaaattttttacctttggatactccaccacagttttta
gcaatagataaacgcaatgcatcgaagaagggggataaagaaaagaaaaagagcaacctt
gaactcttcaaagaagaactgaaacagatacaggaggagcgcgatgagcgtcacaggtta
aagggccgagtcagtcgttttgagcctcttcccacattggaaggaaagcgatcctcggat
ggttcttcacgaagaaaccgtccgtccagtgtcttggatgattcagctcctggctctcat
gacgttggtgatcctacaactacaaatctgtatttggggaacataaatcctcagatgaac
gaggagatgctctgtcaggaattcggtcgctatggtccattagccagtgtgaaaattatg
tggcccaggactgatgaggagagggccagagaaaggaattgtggttttgtagccttcatg
acgagaagagatgctgaacgcgcacttaaaaatttaaatggcaaaatgataatgaatttt
gaaatgaaactgggatggggcaaaggtgtaccaattcctcctcacccaatatacattcca
ccttcaatgatggagcacaccctcccacctccaccctccggactgcccttcaatgcccag
cccaaagagaggctgaaaaaccccaacgcttcaatgcctccccctccgaagtgcaaagag
gagtttgagaagactctgtcgcaagccatagtcaaagtggttatcccaacagaaaggaat
ttgctctctctcatccatcgaatgatcgagtttgttgtgcgtgagggtcccatgtttgaa
gccatgatcatgaacagagagatcaataatccactctacagatttttatttgaaaatcaa
agtccagctcatgtttattaccggtggaagttatacaccatattacagggcgaatctcca
acaaaatggaaaacagaagacttcagaatgtttaagaacggatctttctggcgaccaccg
cctctcaacccttatttacatggcactcctgaagaggaggagcgcgatgatgacgatgat
gaagaaagtggcaagaagggcaccttgaaagacgacgagagggataaactggaagagtta
ctccgaggtctcacgccgaggaagagcgacatagctgacggcatgtttttctgcctcacg
catgccgatgctgctgaggaaatagtggaatgcattgctgagtctctgtccatacttaaa
acacctctgccaaagaagattgcaaggttatatttggtgtcagatgtgctgtataactca
tcagcaaaagttgctaatgcctcttattacagaaaattctttgaaacaaaactttgtcag
atattttctgacctaaatgccacttataagacgatacagggccatttacaatcagagaat
tttaagcaacgagtaatgtcctgtttccgtgcatgggaagactgggcagtgtatcctgat
ccgttcctgattaaacttcaaaacattttcctgggactcgtcagtctcgatccagaaaag
gagattgaagaactggtgccagagctgccagaaaggactgaggacattgatggtgctcct
attgtggaggaggagctggatggcgctcctttcgatgatgttgacggcatgcccatcgat
ggagcaccaattgatggcgctccactcgatgacctggatggaatgcccatcaagggaaca
gatgatgatctggatggtattccttttgatcaaaaaccaggttttaaggtcgctccgtca
aaatgggaggcagtggatggtgctgctttggaagctcaagctgtaaccacgtcaaaatgg
gaaatctttgatctgccagatgaatctgagaaaagtaaatcaagttcaacacgtgaagct
gaaagtaaagacactctcagaggttccagtgctgcagagcagcagtcctacagtaatcct
gttagagaagaatatgattcaaagtctgctaaattttttgagatgagcgaagagaaacgt
gccaaacttcgagaaattgagcttaaagtcatgaagtttcaagacgagcttgaatctgga
aaacgacccaaaaaatctggacagagtattcaagagcaagtagagctttacagggacaag
ttactacagcgggagaaagagaaagagacagagaaagacaaagagaaagagaaagaaaaa
gaaagaaaagacaaagataaatctgatgtgtcccacaaagagaaggacaaagatgactcc
acaccaggcagaaaagaaaaattgtttatttacagaaaacggagacacagtccctccccc
agccccacccgaagtagcagcagtaggcgcggcaggtcgccctcaccacgatcagagcgc
tctgatagatcctatacgaaagacagctctcggttgtcttataaagactctccgagagac
agtaaccgcaagtcttctaaaaggtctccttcacccccaagaacacctaagaggtcgcgt
aggtccagatcaagaacgcctaaaaaatcctcaaagaaatccagatctcggtcacgatca
cctcaccgttctcacaagaaatccaaaaaaagcaaacactga
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