Rhinichthys klamathensis goyatoka (western speckled dace): 130076143
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Entry
130076143 CDS
T09701
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3
KO
K15195
AF4/FMR2 family member 3
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rkg03021
]
130076143 (aff3)
Transcription machinery [BR:
rkg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
130076143 (aff3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
130076143
NCBI-ProteinID:
XP_056097093
LinkDB
All DBs
Position
Unknown
AA seq
1247 aa
AA seq
DB search
MPTTYGSKGKLASVCFMLQHASQDMTQSWPYQQPAGEGSNQHLLYSHSKEGKLPNSRHRH
VRDGVSMRMPSRPLVAPHKSMLADDLKLSSDEDDKDEGSEQTTSWADNDRLSGQQQHHAH
IGRVRHSSSGSSGSNPSSEWESSSQRSRSPSPGTHARCGTPTQQRTLNCSIETESPPSIQ
WQLDRWLEKVPKKHRSTDHDPGGGQRRSAKSDSGRGPSPGRYWGRDSESNYSPCESPVPS
PKFDYSPRNSPRPSPEYSPCPSPGISLVPSPLPSVCPSPGDSLRGSRSPSPLFPHPPRSP
SPNFSSTTVLIQGTYPQVQSPQQESPRHIAHPTVASNPAHRPKVRPWVPPDHSSNQRKEF
RPKDSQSRDSQSRDSRSRDSRSKDSRSKDSRPGPPQQPHHSKHSLTEKSHKDLTHKPKSK
NSESTSKQRFNSPSNPITKHSLKKRPRISPKPQARLSSTTDHSIEHNHRNNEPTGASNQS
STSKSGRSSYFNTLKSSDRGPSSKSRDSAQIELNNQSSHSSKTKSFPDTKQSRSKQTTQP
RSSPKPRVKLGDTPVPKTGHSQKEPKPREREREVDSRGKAQGVTLVPTGKEQRQRILAEE
QVIRRRWVRSSEEEEDEEDRRTEEGERERKRRKRREQEAEWEAVQPKQRPHTISQHHAQQ
GCNGLNLEEQRRKKRRWSNEDISSHPHVIDSSPSPPLSPPSPTPVVKPTRPSSSSSSSSL
PSSSSSSESDSESSPPRNVTKVPADSTSTQKTISKRRHDKQGSGTGAHPHGSSLSTPETD
TQVRGRHKLYTLVPFGRSEKSPTVPHRGLKKLVVRIDLSLLGRVPSADEITERQSSSLSL
SSGKAKEKTSMKQLHHSDQLPGDGRSKRKAENGDAQRENKRNHSRADRLPTSVHNETEET
CADNKQNGCQDDYFYSKRPVSPLSPPSDILELSKSSVKAQHAEKYHTPPEKNDSTAQKTQ
VQKTQPKVEVECVGVSGHLQPLSGSRVPPPNLPLHYRGTVPISDVSHHAEYYMHEAKRLK
HRADGMVDKLGKAVNYVDAALSFMECGKAMEEGPLESKSPYTMYAETVELIRYAMRLKSH
AGPGASQEDKQLAVLCFRCLALLYWQMFRLKKDHALKYSKVLLDYFKSSPKGPHKPLWND
AGKGTVPPASICSVNIMGSHTGSSPSSVISIPHRIHQMAANHLNITNSVLYSYEYWEVAD
TLAKENKEFFNYLNTLTGPLTLHSSMAHIVQYTRQGLQWIRITANLS
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccacttatggaagtaagggaaaacttgcaagtgtttgtttcatgcttcagcac
gcatcccaggacatgacccagtcctggccttaccagcagcccgcaggggaagggagcaac
cagcatttgctgtactcgcactcaaaggagggaaaactgcccaattcacgacacagacat
gtgagggatggtgtctctatgaggatgccctcacgtccactcgtggcccctcataaatcc
atgctcgctgatgacctgaagctcagcagtgacgaagatgacaaggacgagggaagtgag
caaacaacttcctgggccgataatgaccgcttgtcaggccagcagcagcaccacgcacat
attggaagggtgagacattctagctcagggtcttcaggatcaaacccctccagcgagtgg
gaaagcagtagccagcgatcacgtagcccgagcccaggaacgcacgcccggtgtgggaca
ccgacccaacagcggaccctaaactgcagcatagagacggagagtccaccatccatacag
tggcaactggacaggtggcttgagaaagttcctaaaaagcatcggtcaactgaccacgac
ccaggagggggacagcgacggagtgcaaaatctgacagtggccgaggaccatcacctgga
agatactggggtagagactctgagtcaaattatagtccttgtgaaagtccggtcccaagt
ccaaaatttgactacagccccagaaacagtcctcgtcccagcccagaatacagtccatgc
cccagtccaggaattagccttgtgccaagcccactgccaagtgtgtgcccaagtccagga
gacagcctccgagggagtcgaagtccaagccctttatttccgcatcctcccagaagcccc
agtccaaatttctcatccaccacagtacttatccaaggtacatatcctcaggtacagtca
cctcaacaggaaagtcccaggcatattgcacatccaacagttgcctccaatccagcacat
cgtcccaaagtcaggccatgggtgcctccggaccatagctccaaccagagaaaggaattt
agacccaaagactctcaatccagagactctcaatccagagactctcgatccagagactct
cgatccaaagactctcgatccaaagactctagacctggtcctcctcaacaaccccatcat
tccaaacacagcttaacagaaaagtcacacaaagatctcacacacaagcctaaatccaaa
aactctgaatccacaagcaagcaaaggtttaactctccttcgaacccaattacaaagcat
tcattgaagaaaagaccacgcattagcccaaaaccacaagccaggctctcatctacaact
gaccatagtattgaacataatcacagaaacaatgaacctacaggagcgtcaaaccagagt
tcaacctccaaatcgggccgctcatcttatttcaatactttaaagagctcagaccgtggt
ccttcatcaaagtccagggactcggcccaaatcgaactcaacaatcaatctagtcacagc
tctaagactaaatctttcccagataccaagcaatccagatctaaacagactacccaaccg
cgttccagcccaaagcccagggtcaaactaggagacaccccggtgcccaaaaccgggcac
tcccaaaaagagccaaagcctagagagagagagagggaagtggacagccgaggtaaggcc
cagggagtgaccctggtgccgactggcaaggagcagagacaaagaatactggcggaagag
caggtaataaggcgccgctgggttcggagttctgaggaagaggaagacgaggaagatagg
agaactgaggaaggggaaagagaaaggaaacggagaaagaggagggagcaggaagctgaa
tgggaggcggtccagcccaagcaaagacctcacaccatcagccagcatcacgctcaacag
ggatgcaacggactcaaccttgaggagcagaggaggaagaagagaaggtggagcaacgag
gacatttcctcacatcctcatgtgatagactctagcccttctcctccactctctccacct
tcgcctactcctgtcgtcaagcccactcgtccatcatcttcctcgtcctcatcctcctta
ccgtcctcatcgtcttcctctgaatcagactctgagtccagtccaccccggaacgttacc
aaagtccctgcagattcaacatcaactcaaaaaacaatttcaaagcggaggcatgacaaa
cagggttcaggcactggtgctcacccccacggctcgagcttaagcacccctgagacagat
acacaagtccggggcaggcacaaactctacacactggttcctttcggacgatctgagaag
tctcccaccgtcccacatcgaggcctgaaaaaacttgttgtgaggatagacctctcgctt
ctgggtagagtccctagtgcagatgagattactgagagacagtcctcatctttatctttg
tcatcgggaaaggcaaaagaaaagacatcaatgaagcagctgcaccactctgaccaactg
cctggagatggcagaagcaaaagaaaagctgagaatggagatgctcaaagagaaaataag
agaaatcactctcgtgcagatagacttccaacgtcagtccataatgagactgaggaaacc
tgcgctgacaacaaacaaaacggatgtcaggacgattacttttactccaagaggccagtg
tccccattgtctcctccatctgacatattagagctctcaaagtcctctgtgaaagctcag
catgcagagaagtaccacacacctccagaaaaaaacgattcaacagcacagaaaacacag
gtccagaagacgcagcccaaggtagaggtggagtgcgtaggggtgtcaggacacctacag
cctctctctggatctcgggttcctcccccaaaccttcctcttcactacagaggaaccgta
cctatcagtgatgtctctcatcatgctgagtactacatgcatgaggccaagaggttgaaa
catcgagcagacggaatggtggataagttaggaaaagctgtgaattatgtggatgctgct
ttgtccttcatggagtgtggtaaagccatggaagagggaccactggagtccaagtctccc
tacaccatgtatgctgaaactgtggagctcataagatacgctatgagacttaagagtcat
gcaggccctggagccagccaagaagacaaacagctggctgtactgtgtttccgctgtctt
gctcttctttattggcaaatgttcagacttaaaaaggaccacgctctgaaatactctaaa
gtcctgctggactacttcaagagttctccaaaaggacctcacaaacccctttggaacgat
gctggaaagggaactgtacctcctgcctctatttgttctgtcaatataatgggatctcac
acaggcagctcacccagcagtgtcatcagcattccccatcgtatccaccagatggcagca
aatcacctcaacatcaccaacagtgtcctgtacagttatgagtactgggaggtggctgac
accctggccaaggaaaataaggaatttttcaactatctgaacacactgactggacccttg
actctgcatagcagtatggctcatatcgtccaatacaccaggcaaggactgcagtggatc
cggatcactgctaatctatcataa
DBGET
integrated database retrieval system
