Rhinichthys klamathensis goyatoka (western speckled dace): 130076169
Help
Entry
130076169 CDS
T09701
Symbol
copb2
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130076169 (copb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rkg04147
]
130076169 (copb2)
Membrane trafficking [BR:
rkg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
130076169 (copb2)
Exosome [BR:
rkg04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
130076169 (copb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_LRRK2
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
130076169
NCBI-ProteinID:
XP_056097121
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPSEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RAAKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHDKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVNFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVSGLRGSNNVALGYDEGSIIIKLG
REEPAMSMDANGKIIWAKHSEIQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTLQH
NPNGRFVVVCGDGEYIIYTAVALRNKSFGSAQEFVWAHDSSEYAIRESSSLVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWDNTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYLSEKVAASQESNEGVTEDGIEDAFEVLGEIQEVVKTGLWVGDCFIYTSSV
NRLNYFVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNAAMVAKLAEGAE
RDGKNNVAFMTYFLQGKLDNCLELLIKTNRLPEAAFLARTYLPSQVSRVVKLWRESLSKV
NQKAAESLADPTEYENLFPGLKEAFVAEQYLRESCLGKTRPASDYPLITPNEERNVLEEA
SGYEPKGIIPTPTQKVKDTEEAPEDVGVLASVIAAVSAPVVAAMSHAESQPPQKVEEETE
EEPPKMTEAEQKVIDELEDDLDNMELDDIDTTDVNLDDDFLDD
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgaggctggacatcaagcgcaaactcacggctcgatctgaccgtgtcaaaagc
gtagaccttcatccatctgagccatggatgctggccagtctgtacaacggcagtgtctgt
gtgtggaaccatgaaacacaaactctggttaagacgtttgaagtctgtgacctgccagta
agagctgccaagtttgttgccaggaaaaattgggtcataactggtgctgatgacatgcaa
attcgagtttttaactacaacacattagagcgagtacacatgtttgaggcccattcagat
tacattcggtgtatcgctgtgcatcccacccagccctacatcctcacgagcagcgacgac
atgttgataaagctgtgggactgggagaagaaatggtcctgcagtcaggtatttgagggc
cacacacactacgtcatgcagattgtcatcaaccccaaggacaacaaccagtttgcgagt
gcatcgctggacagaaccatcaaggtttggcagctgggctcttcctctcctaactttact
ctggagggtcatgataagggggtgaactgcattgattattacagtggaggagataaaccc
tacctcatatctggagctgatgacagactggttaagatttgggactatcagaataagaca
tgtgtccagactcttgagggtcatgctcagaatgtgtcctgtgtaaacttccacccagag
ctgccaatcatcatcactggatcagaggatggcacggttcgtatctggcactccagcact
taccgtctagagagcaccctgaactatggtatggagcgggtgtggtgtgtgtccggcttg
cgcggctccaacaatgtggcattgggttatgacgaaggcagcatcattatcaagcttggt
cgtgaggagccagccatgtcaatggatgccaatggaaagataatttgggccaagcactct
gagattcagcaggctaacctcaaagccatgggagatgctgagatcaaggatggcgagagg
ctgccactggcggtgaaggacatgggcagctgtgagatttaccctcaaactctccagcac
aatcctaacggcaggtttgttgtggtgtgcggagatggagagtacatcatctacactgct
gtggctctgaggaacaagagctttggatctgcacaggagtttgtctgggcccatgattca
tctgagtacgcgattcgggaaagcagcagtctggtgaaaatcttcaaaaattttaaggag
aaaaaatcttttaagcccgactttggagcagaaggcatctatggtggtttcttgctgggc
gtcagatcagtgaatggcttggctttctatgactgggataacacagagctgattcgtcgc
attgagatccagcccaaacacattttctggtcagactctggtgagctggtttgcattgcc
acagaggagtctttcttcatcctgcgttatctgtcagagaaggtggccgcatcacaagag
tcaaatgagggggttactgaagatggaatcgaagatgcttttgaggtcctgggagagatt
caggaagtggtaaagacgggtctgtgggtgggagactgtttcatttacaccagctcagtc
aacagactcaactactttgttggaggagagattgtcaccattgctcacctggacagaacc
atgtaccttctgggatacattcctaaagatgaccgtctttacctgggtgataaggagctg
aacattgtcagttactctcttctggtgtctgtcctggagtaccagactgctgtcatgcgc
agagactttggcatggcagacaaagtgctacccaccatccctaaagaacagagaaccagg
gttgcccacttcctggaaaaacagggtttcaagcagcaggctctggccgtgtccactgat
ccagagcaccggtttgagctggcgctgcagttaggagagctgaaaatcgcctaccagcta
gcagtagaagctgagtctgagcagaagtggaagcagttggcagagttggccatcagtaag
tgccagtttggtttggcacaggagtgcctccatcatgcccaggactatggaggtcttctg
ctgctggccactgcatctggcaatgctgcaatggttgctaagcttgcagagggggcagag
cgtgatggaaaaaacaatgttgccttcatgacctacttcctgcagggaaaactggacaac
tgtttggagctcctgatcaagaccaatcgtctaccagaagcagcctttcttgcccgcaca
tatctgcctagccaagtatcaagggtggtgaaactttggagagagagcttgtctaaagtg
aatcagaaagctgcagagtctctggcagatcctacagagtatgagaacttgttcccaggc
ctgaaagaggccttcgtggcagagcagtacctgagagagtcctgcctcggcaaaaccaga
cctgcctccgactacccactgatcacgcccaatgaagaaaggaacgtgctggaggaagcc
agtggttatgaaccaaaaggaattatccccactcctacacagaaggtgaaagacacagag
gaggccccagaggatgtgggtgttttggcttcagtgatagcagccgtctctgctccagta
gttgctgccatgagtcatgcagaatcccagcctcctcagaaggttgaggaggagactgag
gaagagcctccaaaaatgacagaagcagaacagaaggttattgatgaactggaggatgat
ttggataacatggagcttgatgacattgacaccacagacgtcaatctggatgacgacttc
ttggatgactaa
DBGET
integrated database retrieval system
