Rhinichthys klamathensis goyatoka (western speckled dace): 130076219
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Entry
130076219 CDS
T09701
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rkg03037
]
130076219 (ift88)
Cilium and associated proteins [BR:
rkg03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
130076219 (ift88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
TPR_19
TPR_6
TPR_14
TPR_16
TPR_7
TPR_11
ANAPC3
TPR_17
TPR_9
SNAP
ARM_TT21_5th
TPR-S
TPR_10
TPR_CcmH_CycH
ARM_TT21_4th
ARM_TT21_2nd
TPR_MalT
HAT_PRP39_C
TPR_15
DUF2225
Coatomer_E
ARM_TT21_C
DUF6584
SHPRH_helical-1st
RNPP_C
HEAT_Nup120
TPR_4
Consortin_N
Evf
FumaraseC_C
Motif
Other DBs
NCBI-GeneID:
130076219
NCBI-ProteinID:
XP_056097202
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MENVHLVPEEEDDDLYTGYNDYNPTFDSEDLHNDVGFQQAVRTSHGRRPPMTAKYPGTAI
GGRPIGTAYGSRMPVGTAMGRPMTGAVQDGAARPMTAVRAAGYSSSIARGSVFDPLGQSK
GPAPPLERQNEDTPEEKIKILEKKVNDLIEESCLAHAHGDLQLSLEKAKEAGRKERALVR
QREQTGTADHINLDLTYSVLFNLANQYASNDMYTEALNTYQVIVKNKMFNNAGRLKVNMA
NIYFKQKNYTKAIKFYRMALDQISNAHNAMRIKIMQNIGVVFIHMGQYSDAITSFEYIMS
ENPNIKTGFNLILCYYAIGDRERMKKAFQKLICVPLGIDDEDKYIPANDDPHANMVIEAI
KNDKLHQMERDRKALAEKYIMTSAKLIAPAIESSFAAGFDWCVDMVKGSQYVELANDLEI
NKAITYLRQRDFKQAVETLKMFEKKDSRVKSAAATNLSFLYFLEKDYDQADRYAELAMTA
DRYNPAALINKGNTVFVKEDYEKAAEFYKEALRNDSSCTEALYNLGLTYKRLGRLEEALD
CFLKLHAILRNSAQVMYQLANLYEMLEDPHQAIEWLMQLTSVTPTDAQVLAKLGDLYDNE
GDKSQAFQYYYESYRYFPSNISVIEWLGAYYIDTQFCEKAIQYFERATLIQPTQVKWQLM
VASCYRRSGNYQKALETYKDIHRKFPENVECLRFLVRLCTDMGLKEVQDYATKLKKVEKM
KEIREQRVRSGRESSARGRREGSAGSGSSSSPINTPPLRASVSRSEAKYSPVLQQGRDSG
QSNHGTSAKGERLSVKLKTLPGSNEPYEASTQQEIDASYVDPLGPQMQRPKTAARKRTEE
DEFADEELGDDLLPE
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgtgcatcttgtcccagaggaagaggatgatgatttgtatacaggctacaat
gattacaatccgacttttgactcagaggatcttcacaacgatgtgggttttcagcaggcc
gtcaggacgagtcatggcagaagaccaccaatgaccgcaaaatatcctggcactgctatt
ggagggcgaccgattggaacagcgtatgggtctcggatgcctgttggcactgcaatggga
aggcctatgactggagctgttcaggacggtgcggctcgtcccatgactgcagtgcgggca
gcaggatattcttcatctatagctagaggctcagtgtttgatccactgggacaatcaaaa
ggaccagcccctccattagagagacagaacgaagacactccagaggaaaagataaagatc
ctggaaaagaaggtgaatgatttgatagaggagagctgtctcgctcatgctcatggggat
cttcagctgtctctagagaaagccaaagaggcgggcaggaaggaaagggctctggtgaga
cagagagaacaaacaggcactgcagaccacatcaatctggatcttacctactctgtattg
tttaatttagcaaaccaatatgccagtaatgacatgtacactgaagctttgaacacatac
caagtcattgtgaagaacaaaatgttcaataatgccggtcgattgaaagtaaacatggca
aatatctatttcaagcaaaagaattacacaaaagctatcaaattttaccgcatggctttg
gatcagatctcaaatgcccacaatgcaatgaggatcaagatcatgcagaacattggagtt
gtgttcatacatatgggccagtactcagatgccatcacatcctttgagtacatcatgagt
gagaatcccaacataaagacaggcttcaacctcatcctgtgctactatgccatcggagac
cgtgagaggatgaagaaagcttttcaaaaactaatttgcgtgcccctcggtattgatgat
gaagacaagtatatccctgcaaatgatgaccctcatgcaaacatggtgattgaggcaata
aagaatgataagcttcaccaaatggaaagggataggaaagcactagcagaaaaatacatt
atgacctcagccaagcttattgctccagccattgagtcgtcatttgcagctgggtttgac
tggtgtgtggacatggtgaagggttcacaatacgtggagcttgcaaatgacttggagatc
aataaagctattacgtacttaagacagagggacttcaaacaggcagtggagacgctaaag
atgtttgagaagaaggacagtcgagtaaaaagtgctgctgccactaatctgtcttttctc
tactttttggaaaaagattatgaccaggctgaccgttatgctgagctagccatgaccgcc
gaccgctacaaccctgctgccctcattaacaaaggcaacacagtgtttgtgaaagaggac
tatgagaaagcagcagagttttataaggaggctcttcgcaatgactcatcctgtactgaa
gctctctataacttaggtttgacctataaaaggttgggtaggctggaggaagccctggat
tgcttcctcaaactgcacgctatcctcagaaacagtgctcaggtcatgtaccagctggct
aatttatatgagatgttggaggaccctcatcaggccattgagtggctgatgcagctcacc
agtgtgacccccacagatgcccaggtgctggccaaactgggagacctctatgacaatgag
ggagacaaatctcaggccttccagtactattatgagtcgtacaggtattttccctcaaac
attagtgtcattgaatggttgggagcatattacatcgacacccagttctgtgagaaagct
attcagtactttgagagagctacccttattcaaccaacacaggtcaagtggcagctgatg
gtggctagctgttacaggagaagtgggaattatcaaaaggcactcgagacctacaaggac
attcatcggaaatttcctgaaaatgttgaatgtctacgcttcctggtcaggctgtgcact
gatatgggactaaaagaggtgcaggattatgccaccaaactgaagaaagttgaaaaaatg
aaggagatcagagagcagagggtgcgatctgggagggagagcagtgctcgagggcgcagg
gaaggcagcgctggcagtgggagcagctcaagccccatcaatacccctcctctgagagcc
agtgtttctcgctctgaagctaagtatagtcctgtgctgcagcagggcagagacagtgga
caaagcaaccatggcaccagcgccaagggtgagaggcttagcgttaaactaaaaactctt
cccgggtccaatgagccgtatgaggccagcactcagcaggaaatagatgcatcttatgtc
gatccgttggggcctcaaatgcagagaccaaaaacagcagcaaggaaacgcacagaggaa
gatgagtttgctgatgaagagctgggagatgacttactgcctgagtga
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integrated database retrieval system
