Rhinichthys klamathensis goyatoka (western speckled dace): 130076246
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Entry
130076246 CDS
T09701
Symbol
nfatc2a
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 2 isoform X1
KO
K17332
nuclear factor of activated T-cells, cytoplasmic 2
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04020
Calcium signaling pathway
rkg04148
Efferocytosis
rkg04218
Cellular senescence
rkg04310
Wnt signaling pathway
rkg04370
VEGF signaling pathway
rkg04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130076246 (nfatc2a)
04370 VEGF signaling pathway
130076246 (nfatc2a)
04020 Calcium signaling pathway
130076246 (nfatc2a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130076246 (nfatc2a)
09143 Cell growth and death
04218 Cellular senescence
130076246 (nfatc2a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
130076246 (nfatc2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130076246 (nfatc2a)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
130076246 (nfatc2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
130076246
NCBI-ProteinID:
XP_056097238
LinkDB
All DBs
Position
Unknown
AA seq
900 aa
AA seq
DB search
MSSFYGDKAAIGLAEELSQVNCQDELEFDYLFEYGTTTGLQDEQSISSDKDLISPASLSY
PLVEASQYGIKPCASSYAEVNTEGLSGYEQLEAKNYLEYARPNQALSPRIEITPSREHYS
HGRDSLQNHLVNPSPGLTVPGHDPLAYREPQCLSPASSNSSTSWHSENLSPWASPCVSPS
NSQATGDLCPRLQGVHTGSPRTSPGTSPRTSLAEDGCVGPRSPSPRPGSRSTSPLCKRTY
EMYRNPNLVPVARSRSPSPHGGHEEHHAGHYGSNNLSGSMNGFGVGQATSIPTKIVKTNQ
QAYPLYPDNHTESYLVSCDQDMKTKPGPESFFVIPQIWPKQLVPGICSIPVASVPPLEWP
LPSRSDQYELHVEVQPKPHHRAHYETEGSRGAVKAPTGGHTVVQLRGYRGKEPLGLQIFI
GTADERILKPHAFYQVHRITGKTVTTTSYEKIINGTKVLEIPLEPKNNMKAIIDCAGILK
LRNADIELRKGETDIGRKNTRVRLVFRIHIPQQGGQHLSLQVASHPIECSQRSAHELPMV
EKQDMDGCSVLGGQQMILTGQNFSADSKVIFMEKTHDGQQIWELEATVDKDKSQASMLFI
EVPPYRDPSICHPAKVNFYVINGKRKRSQPQHFTYTPLPVPSIKTEPVDEYESGRMRYSM
SQMLGVSPQPYYNPRGVITPDSGLVPGLVPCQQTRLGVSPPDHRFQQQSQAILYARPGKS
MSSSPIYSQTGATMMPDSHRSVLVHTGSPAQSPHLGGQHPSNQHPSIIQFSPTNHHLLRG
GDPPAPPPPEHQHIIYCEGYNQHSPQATGANRSPAPAQAPQHPQNYPTVIQQQPFLQRVA
KDRSPPVQVEAQRCSSAEEPRTSVPGRVTVKQENLDQAYLDDVNEIIRKDLTGVHGRGQT
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgagctctttttacggcgataaggctgcgatagggctggctgaggagctcagtcaggtg
aactgtcaggatgagctggagtttgactatctttttgagtatggaaccaccacgggactt
caagatgagcaaagcatctcctccgacaaagatctcatctctcctgccagcctgtcctat
cctctggtggaagcttcacagtacggcatcaagccgtgtgcgtcttcctacgcagaggtc
aacactgaaggtctctctggctacgagcaactggaggcaaagaactacctggagtacgcc
agacccaaccaggcactgagcccccggattgagattactccctcccgcgagcactatagt
catggtcgagactccctccagaaccatctcgtgaaccccagtcccgggctcaccgttccc
ggtcacgatcctctggcctaccgggagccgcagtgcctgagtcccgccagcagcaactca
tccacctcctggcactcggaaaacctctcgccctgggcctcgccctgcgtttcgcccagc
aacagccaggcgactggagatctctgcccacgacttcagggcgtccacacgggctcccct
cgaaccagtccgggcacttctccacgaaccagcctggccgaggacggctgtgttgggccg
cgctctccttccccccggcccggctcgcgttccacctcccctctatgcaaacgcacctac
gagatgtacaggaaccccaacctggtgccggtggcccgatcacgcagcccgtcaccccac
ggtggccatgaagagcatcacgccggccattatggctcaaataacctctcagggtccatg
aatgggttcggcgttggccaggctacttccattccaaccaagatcgtgaagactaaccag
caggcctacccgctctaccctgacaaccacactgagagttacctggtgtcatgtgaccag
gacatgaagaccaaacctggccctgaatctttcttcgtaatccctcaaatctggcctaaa
cagctggtgcctggcatatgcagcatccccgtggcttccgtgccccccctggagtggccc
ctaccgagccgcagcgatcagtacgagctccacgtggaggtgcagcccaaaccccaccac
agagcccactacgagaccgagggcagccgaggggcggtcaaagcccctactggaggtcac
actgtggtccagttacgtggatacaggggcaaggagccgcttggtttgcagatctttatt
ggcacggcagacgagcgaatcctgaagcctcacgctttctatcaggtccatcgcattacc
ggcaaaaccgtcaccaccaccagctacgagaagatcatcaacggcaccaaagtcttggaa
attcctcttgagccaaagaataatatgaaagcaataattgattgtgccgggattctcaag
ctgcggaatgcagacatcgagctgcggaaaggcgagacggacattgggcgtaaaaacacg
cgtgttcgactggtatttcgtattcatattccccagcaaggaggtcaacatttgtctctg
caagttgcttcgcatcccattgaatgctcccagaggtctgcccacgagctgcccatggta
gagaagcaggacatggatggttgttcggttcttggaggccagcaaatgattctcaccggc
cagaacttcagcgcagattcaaaggtgatcttcatggagaagactcatgatggacagcag
atttgggaattggaagccacagttgacaaagacaaaagtcaggcaagcatgctgttcatt
gaggtgcctccatatagagacccatccatttgccatccagccaaagtcaacttctacgta
ataaatgggaaacggaagcgcagtcagcctcagcatttcacctacacacctctaccagtt
ccgtctattaagacagagccggtggatgaatatgaatctggtcggatgcgttattccatg
tcgcaaatgctgggggtgtctccccagccgtactataaccctcggggggtcatcacccca
gacagtggcctggtgcctggcctcgtcccctgtcagcagacccgcctgggtgtctcccct
ccagaccaccgatttcagcagcagagccaagccatactgtacgcccgtcctgggaaaagc
atgtcaagcagtcctatttactctcagacgggagccactatgatgccagactcccatcgt
tcagttctggtccacacgggttccccagcccagtcccctcacctgggtggccaacatccc
tccaaccagcatccctcaattatacagttctcacccaccaaccaccacctgctcagagga
ggagatccccctgcgccaccacccccagaacatcagcacatcatttattgtgagggctat
aaccagcatagtccccaagctacaggggcaaaccgttcaccagcaccagcccaggcaccc
cagcaccctcagaattaccccactgtcatccaacagcagcccttcctccaaagagtggcc
aaagacaggtcacctcctgtccaagtagaggcccagagatgttcctccgcagaagaaccg
agaaccagtgttcctggacgagtcacggtcaagcaggagaacttggatcaggcctacctt
gatgatgtgaatgagatcataaggaaagatctgacaggagtgcatggcagaggtcagaca
tag
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