Rhinichthys klamathensis goyatoka (western speckled dace): 130076402
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Entry
130076402 CDS
T09701
Symbol
cntn3a.1
Name
(RefSeq) contactin-3
KO
K06761
contactin 3/4/5/6
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rkg04515
]
130076402 (cntn3a.1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rkg00537
]
130076402 (cntn3a.1)
Cell adhesion molecules [BR:
rkg04515
]
Immunoglobulin superfamily
Contactins
130076402 (cntn3a.1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rkg00537
]
Others
130076402 (cntn3a.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
V-set_CD47
fn3_2
Tissue_fac
Herpes_gE_N
Interfer-bind
Fn3_nematode
Nuc_sug_transp
Motif
Other DBs
NCBI-GeneID:
130076402
NCBI-ProteinID:
XP_056097456
LinkDB
All DBs
Position
Unknown
AA seq
1009 aa
AA seq
DB search
GSGPLRPVFTKQPGSIVFPLHLNEPSREVTFSCEAQGHPSPSYRWKMNDSFISPQPGSRY
SISGGNLRISQLNKEEDAGIYQCLASNSFGTILSREASLHIAYLDEFKTQRRSPVSVREG
QGVVLLCGPPAHMGELTFSWIFNEYPSFVKQDTRRFVSQKTGNLYIAKVEPSDVGNYTCV
VTNTVTQSRVQGPPTPLILRSDGIMGEYEPKIEVQFPEVLAVAKGLTVKLECFALGNPVP
AISWKRPDGVPFPRKVDISKSSGVLEIPYFQQEDAGPYECMAENSRGKNTVKGRLSFYAP
PHLLEKPQDVQKAIDESLLWECKASAKPKPAYRWLKNGEGIESFEDRVQVVNGALSISSL
TLSDTGMYQCIAENRHGRVFANAELRAIAVAPDFSNSVLKAQTLARQGGDVLIECKPRMS
PRGMISWRKGKEALRESHRVSVLDNGSLRISNITKLDAGLYTCVARNQFGVASSAGTLVV
KEPTIITSKATQLDVTVGESVVIPCQVSRDPSLDVRFTWFFNEQLISFGSHGGYFEKVGG
TSAGDIMIRNIQLRHAGRYTCAVQTKVDSASIATDVVVRGPPDPPLDIKVDEVTETTSFV
SWSPGPDNRSPVFAYNIQIRSPFSLGWQAAKTVPESLGGQQLTARVVELSPWVEYEFRVL
ATNAIGTGEPSKPSQKIRTKDTLPRTTPARVSGGGGSRSELVITWEPVPEELQCGPGFGY
VVAFRPLGGQSWMQAAVTSPDASRYIFKNESIPPFSPFHVKVGVYNNKGEGPFGPVTTIY
SAEEEPSRAPSRIRAKSLSASEVEVSWKPLSWSTSRTRIMGYELRYWSTKDRVDTASVMR
TVGNRTSAVIRGLDPSSTYHIKLKAYNSAGVGPDSAVVNVTTKRPPPSQSPVKVMWNTTD
SKLILKWDHVKALENESEVMGYKVMYKQSTHSRPSVVETNSTSLELSLPVDEDYIIQIKP
VSEGGEGSSSKQITIPRIAVAHAIGFAPERKALPLLVTLLLYCTVRTFL
NT seq
3032 nt
NT seq
+upstream
nt +downstream
nt
aaggcagcggtcctctgaggccagtgttcaccaaacagccgggaagtattgtattccctc
tccatcttaatgagcccagccgggaggtcaccttcagctgtgaagcccagggacatccgt
ccccgtcctacaggtggaaaatgaacgacagcttcatttcccctcaacctggctctcgat
acagcatctcaggaggaaaccttcgaatcagccagctcaataaggaagaggatgctggta
tttaccaatgtctggcctccaactctttcgggaccattctcagcagagaagctagtcttc
acattgcttatctggatgagtttaaaacccagaggagaagtccagtgagtgtcagagaag
ggcaaggtgtggttcttctctgtgggccgccagcacatatgggagagttgaccttttctt
ggatcttcaacgaatatccctcatttgtgaagcaggacacgcggcgctttgtgtcacaga
aaacaggcaacctctacatcgctaaagtggagccgtcagatgtgggaaactacacttgtg
tcgtgactaacactgtgacccagagcagagtgcagggacctcccacgccacttatactcc
gcagtgatggcattatgggagaatatgagccaaaaattgaggtccaatttcctgaagtct
tggctgttgccaaggggttgactgtaaaactggagtgcttcgccttgggaaatccagtgc
ctgctatcagctggaaaagaccagacggagttccttttcccagaaaagtggacattagca
aatccagtggagtgctggagatcccttatttccaacaggaagacgcagggccatatgaat
gcatggctgagaactccagaggcaaaaacacagtcaaggggcggctctccttctatgcac
cccctcatctgttggagaagcctcaggatgtgcagaaagccattgatgaatctctgctgt
gggagtgtaaggcgagcgccaagcccaaacccgcctacaggtggctgaagaacggagagg
ggatcgagtcatttgaggacagggtccaggtggtaaacggggcattatccatcagcagtc
tgaccctgtcagatactgggatgtaccagtgtatcgctgagaaccgtcatggccgggtgt
ttgccaacgctgaactcagagccattgcagtggcaccagatttctccaacagtgtgctaa
aggcacagacattggctcggcagggtggagatgttttgattgagtgcaagcctcgcatgt
ctccacgcgggatgatctcctggaggaagggcaaagaagccttgcgagaaagccacagag
tctccgtgctggataatggcagtctccggatatccaacatcaccaaactagacgcaggtc
tttacacttgtgtggcgagaaaccagtttggagtggcaagcagtgcaggcacactagtgg
tgaaagagccaaccatcatcacttctaaagccacccagctggacgttacagtcggagaga
gtgttgttattccgtgccaggtgtcccgtgacccctccctggacgtgagattcacctggt
ttttcaacgagcagttgatcagtttcggaagccatgggggatatttcgaaaaagttggtg
ggacatctgccggtgacattatgatccgtaacattcagctaaggcatgcaggaaggtaca
catgtgctgtacagactaaagtggacagtgcgtctatagcaacagatgttgtggtacgag
gtccccctgacccaccgctggacatcaaagttgatgaagtgacagagacaacatcctttg
tgtcctggagtccaggccctgataaccgcagtcctgtctttgcttacaacattcagatcc
gaagccccttctctctcggatggcaggcggccaaaacagtgccagagtctctgggagggc
aacagctgacagctcgtgtggttgaattgagtccatgggttgaatatgagttcagagtgc
tggccactaatgccataggcaccggggaacccagcaaaccctcacaaaaaatcaggacca
aggacacattgccaaggacgaccccagccagagtcagcggaggaggtggcagtcgctctg
agcttgtcatcacttgggagccagtcccagaagagctgcagtgcggtccaggcttcggct
acgtggttgctttccgccctctcggtggtcaaagctggatgcaggcagccgtgacgtctc
ctgatgcatctcgatacatcttcaaaaatgagagcatccctccattctctccatttcatg
tgaaagtgggagtttacaacaacaaaggagaaggtccttttggacccgtgaccactatct
actcagcagaagaggagccgagtcgcgcccccagtcgcatccgtgccaagagcctgtcag
cctcagaagtggaggtcagctggaagcctttatcctggagcaccagtaggacacgcatca
tgggctatgagctgaggtactggagcacaaaggatagagtggacacggctagtgtgatga
ggactgtgggaaacaggacgtctgcggtcattcgtggactggaccccagcagtacatacc
acatcaaactcaaagcctataacagtgctggtgtgggacctgatagtgccgtggtgaatg
tcaccactaagagacccccgccgagccagtctccagtgaaagtcatgtggaatactacag
actccaaactcatcctcaagtgggatcatgtgaaggctctggagaatgagtctgaagtta
tgggctataaggtcatgtacaagcaaagcacacatagtcggcccagcgtggtggagacta
acagcacatctctcgagctctctctgcctgtggatgaggattacatcatccagattaaac
cagtcagtgaaggtggcgagggaagcagcagcaaacagattaccatccccaggatagcag
ttgcacatgcgattggatttgccccggagcggaaagcactccccctgctcgtaacactat
tactctactgtacggtcaggactttcttatga
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