Rhinichthys klamathensis goyatoka (western speckled dace): 130076466
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Entry
130076466 CDS
T09701
Name
(RefSeq) protocadherin-9
KO
K16498
protocadherin delta 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
130076466
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rkg01009
]
130076466
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rkg04515
]
130076466
Protein phosphatases and associated proteins [BR:
rkg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130076466
Cell adhesion molecules [BR:
rkg04515
]
Cadherins
Protocadherins
130076466
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
MAP17
EphA2_TM
V_ATPase_I
UTP20_C
DUF6377
Herpes_glycop
Motif
Other DBs
NCBI-GeneID:
130076466
NCBI-ProteinID:
XP_056097522
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MDLRDFFLLATLVACFWLDPTIAQELIYPIREELQENVLIGNIPKDLNISHMYSATGASS
NLVYRLVSKAGDTPLLRVMSNTGEIFTTSNRIDREKLCPGPSFEDSECSFEIEVVILPND
YFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYEL
LNGQSAFGLDIVETPEGEKWPQLIVQQNLDRELKDTYVMKVKVEDGGNPQKSSTAILQVT
VTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFGTQVSPATRR
LFALNSTTGLITVQRPLDREETAIHKLTVLASDGSSSPARATITINVTDVNDNAPNIDLR
YIISPINGTVMLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDVPFHLKAVYDNQYLL
ETSALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMEN
NQRDMFLTTISATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFLFT
VTARDNGTRALQSQAAIIVTILDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADA
GENAVVRLSILNDNENFILDPDSGVIKSNVSFDREQQSSYTFDVRAVDNGSPPCSSAAKV
TINVIDVNDNTPIVIYPPSNTSFKLVPVSAIPGSVVAEVFAVDGDTGMNAELKYTIVSCK
REGLFRIDPVTGNITLEQKPSPTDLGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTVGNS
SYIHDLIRRKMETPLDRNIGESRETYQNVDNLKTIIAIVTGAMVVIVVIFITVLVRCRHA
SQFKAAQRKKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEENKPDDPAHEPIN
GTISLPAELEEPGIGRFDWNATPTTTFKPSSPDLARHYKSASPQSAFHLKADTPVSVKKH
HVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKSKGAPLHTRQVKEHFYWS
ISTAYNCPAQY
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggatttaagggattttttcttgttggcaacattagttgcttgtttctggttagatcca
accattgcccaagagctcatttaccctattcgagaagagctacaggagaatgttcttatt
ggaaacataccaaaggacttgaacatctcccatatgtactctgccaccggggctagcagc
aatttggtttaccggcttgtttctaaagcaggtgacaccccgctactccgggtgatgagc
aatacaggagagatttttaccacctccaaccgtatagacagggagaaactctgtcctggc
ccctcttttgaagacagcgagtgctcctttgaaattgaggtggtcattttacccaatgat
tatttcagattaatcaaaattaagataattgtcaaagacaccaatgacaacgcccccatg
ttcccctctcctgtgatcaacatttcaattccagaaaacacactcatcaacagccgcttt
gctattccttctgccactgatccagataccggacccaacagcgtacacaaatacgagctg
ttgaacgggcagagtgccttcggtttggatattgtggagacaccagagggagagaaatgg
cctcagcttatcgttcaacagaatttagacagagagctgaaagatacttatgtgatgaaa
gtaaaagtggaggatggggggaacccacagaaatccagcactgccattctacaggtgact
gtcactgatgttaacgataaccggcccgtctttaaagagagccaaattgaggtccacatc
ccagaaaactctcccgttgggacatctgtagttcagctgcaagccaccgatgcagatgtg
ggggccaatgcagaaataaaatacatgtttggtacccaggtgtctccagcgacacggaga
ctatttgctctgaactccaccactgggctcataacagttcaaaggccgcttgatagagag
gagactgccattcataaactcacagtactagccagcgatggaagctcaagtccagcgaga
gccaccataactatcaatgtgaccgatgttaacgacaatgctccgaacatcgacctgaga
tacatcatcagtccaattaatggtactgtaatgctctctgaaaaagatccaataaacact
aagattgccctcataactgtatcggacaaagacacagatgtcaacggcaaggtgatttgc
ttcattgaaaaagatgttccttttcacctcaaagcagtttatgataaccagtatctgtta
gaaacatctgcactgctcgattatgaaggaaccaaggagtacatcttcaagattgtggca
tctgactctggaaaacctagtttgaaccagactgccctggttagagtacggctggaagat
gagaacgacaatccgcccatttttacccagcctgtcatcgagctggcagtcatggagaac
aaccagcgtgacatgttcctgacaaccatcagcgccacagatgaggatagcggacggaat
gcagagattgtctaccagcttggacccaacgcatcattctttgatctcgaccgcaaaact
ggagtgctaactgcatccagggtgtttgatagggaggaacaagagcggttcctctttacg
gtcaccgctagagacaatggcaccagggctctgcagagtcaagctgcaatcattgtgacc
attctggacgagaatgacaatagccctaaatttacacacaaccactttcaattctttgtg
tcagagaatctgcctaaatatagtacagttggagtaatcacagtcacagatgcagatgct
ggtgagaatgcagtggtgagactctcaatcctcaacgataatgagaacttcatccttgac
ccagattctggagtcataaagtccaatgtttcctttgaccgagagcagcaaagttcctac
acctttgacgtcagagccgtggacaatggaagccctccgtgttcatcagctgccaaggtg
accatcaatgtcattgatgtcaatgataacaccccgatcgtcatttacccaccatcaaac
acctcttttaaactagtgccagtgtctgcgattccagggtcggttgtggccgaggtgttt
gcagtagatggtgatacaggtatgaatgcagaactcaagtacactattgttagttgcaaa
agagaaggtcttttcagaattgaccccgtaacgggaaacatcacattagagcagaaaccc
tcacctacagaccttggcctccacaggctagtggtcaacatcagtgatcttggctatcca
aagtccctgcacacccttgtcctcgttttcctgtacgtgaacgacacagttggaaattcc
tcgtacatacatgacctcatccgacgaaaaatggaaactccgctggatagaaacattggt
gagagcagagagacttatcagaatgttgacaacctgaaaaccattattgccatcgtgaca
ggcgctatggtagtgattgtggtcatcttcataacggttctggtgcgctgccggcacgcc
tcacagttcaaggccgctcagagaaagaagcagggtgctgagtggatgtcccccaaccag
gagaacaagcaaaacaagaagaagaagcgcaaaaagaggaagtcgccaaagagctccctc
ttgaactttgtcaccatcgaggagaacaaacccgacgaccctgcccacgaacccataaat
ggaaccatcagtctcccggctgagctcgaggagcccgggattggacgctttgattggaat
gccacccctactaccaccttcaaacccagcagcccagacttggcccggcactacaagtcc
gcttcaccccagtcggccttccacctcaaagctgacactccggtgtctgtgaaaaagcat
cacgtcatccaggagctgccactggacaatacctttgtggggggctgtgacacgctttcc
aaacgttcctccaccagctctgatcacttcagtgcctcagaatgcagttcacaaggaggc
ttcaagtcaaagggggcacctttgcacaccagacaggtaaaagaacacttttactggtct
ataagtactgcttataactgccctgctcagtactga
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