Rhinichthys klamathensis goyatoka (western speckled dace): 130076562
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Entry
130076562 CDS
T09701
Symbol
vldlr
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130076562 (vldlr)
Membrane trafficking [BR:
rkg04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
130076562 (vldlr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Motif
Other DBs
NCBI-GeneID:
130076562
NCBI-ProteinID:
XP_056097656
LinkDB
All DBs
Position
Unknown
AA seq
876 aa
AA seq
DB search
MVTSILGLLVLPVCLQLCGFARGSRAECEQSQFQCGNGRCIPSVWQCDGDLDCSDGSDET
SCVRKTCAEVDFVCRSGQCVPKRWQCDGEPDCEDGSDESIEMCHTRTCRVNEFSCGVGST
QCIPVFWKCDGEKDCDNGEDEINCGNITCAPLEFTCASGRCVSRNFVCNGEDDCGDGSDE
HKCAPASCGPSEVPCGNNTCIPRSWLCDDDVDCQDQSDESPERCGRHPTPPAKCSPSEMQ
CGSGECIHRKWRCDGDPDCKDGSDEKNCSARTCRPDQFKCDDGTCIHGSRQCNGLRDCAD
GTDEVHCKNLTQCSGPDQFKCRSGECIEMSKVCNKVRDCPDWSDEPIKECNMNECLLNNG
GCSHICRDLTIGYECDCTPGLQLIDRKTCGDVNECLNPGICSQICINLKGGYKCECHNGY
QMDPTTGVCKAVGKEPCLIFTNRRDIRKLGLERREYTQIVEQLRNTVALDADFVQQTIFW
ADLGQKAIFSTVLDKQEASHTKVIDNVQVPVGIAVDWIYKNIYWSDLGSKSIAVANFNGT
KRKVLFNSGLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGIDRQVLVDTDIQWPNGI
TLDLIKGRLYWVDSKLHMLCSVDLNGDNRRKVLQSPDYLAHPFALTVFEDRVFWTDGENE
AIYGANKFTGSDVTVLASNLNEPQDIIVYHELIQLSGTNWCNEKMENGGCSFMCLPAPQI
NKHSPKYTCVCPQGQTLSSDGLRCRPEAPTAAPRDGGRLTPHPSHPKASAISKVASEPVH
TEGNISTSIHEVNSSAKGSAAAWAILPVLLLAMAAAGGYLMWRNWQIKNKKSMNFDNPVY
LKTTEEDLNIDITRHSASVGHTYPAISVVNTEDDLS
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgtctatcctggggcttctcgtcctgccagtatgtcttcagctgtgtggattt
gcgcgcggttcccgggcagaatgtgagcagtctcagttccagtgtgggaacggccggtgt
attccctctgtgtggcagtgcgacggagacctggattgctccgacgggagcgacgagacg
tcctgcgtgaggaagacctgtgccgaggtggacttcgtctgtcgcagtggacagtgcgtt
cccaagagatggcagtgcgatggagaaccggactgtgaggacggctcggacgagagcatc
gaaatgtgccacacgagaacctgccgagtgaacgagttcagctgtggcgtcggctccacg
cagtgcattcccgtcttctggaagtgtgacggcgagaaagactgcgacaacggagaggac
gagattaattgtggtaacattacttgcgcccctctggagttcacctgtgccagtggccgc
tgcgtgtctcgtaatttcgtctgtaacggtgaggatgactgcggggatggcagcgatgaa
cataaatgcgctccggcctcctgcggccccagtgaggtcccctgcgggaacaacacctgc
atcccccgaagctggctgtgcgacgacgacgtggactgccaggaccaatcggacgagtcg
ccggagcgctgcggccgacacccgacgccgccggcgaagtgttcgcccagcgagatgcag
tgcggctcgggggaatgcattcacagaaagtggcgctgcgacggggacccggactgcaag
gatggcagcgacgagaaaaactgctcggcccgcacctgcaggcccgaccagtttaagtgc
gatgacggcacctgtatccatggcagccggcagtgtaacgggctcagggactgtgcggac
ggcacagatgaagtccactgcaaaaacttaacccagtgtagcggtcctgaccagttcaag
tgtcggagtggagagtgcattgagatgagtaaagtgtgtaataaggtccgtgactgtcct
gactggagtgatgaacccatcaaagagtgcaatatgaacgaatgcttgctcaataacgga
ggctgctcgcacatctgccgcgacctgacgattggctacgagtgcgactgcacgccagga
ctccagctcatcgatcgcaagacctgcggtgatgtcaatgagtgcctcaaccctggtata
tgtagtcaaatttgtataaatcttaaaggaggctacaaatgtgagtgtcacaatggctat
cagatggaccccaccactggagtgtgcaaggctgtaggtaaagagccctgtctgattttc
accaatcgaagagacatccgcaaactaggcctggagcgccgtgaatatactcagattgtg
gagcagctgcggaacacagttgcccttgatgcggacttcgttcagcagacgatattctgg
gctgacctggggcagaaggcaatttttagcacagtattggataagcaggaagcaagtcac
acgaaggtgattgacaatgttcaggttcctgttgggattgcagtggattggatttacaaa
aacatctactggtcagacctgggcagtaagagtattgctgttgccaacttcaatgggacc
aagaggaaggtgctctttaacagcggcctaaaagaaccagcctctattgctgtggatcct
ctttcaggattcctgtattggtcagactggggcgagccagctaagattgagaagtctggt
atgaacgggattgacagacaggtcctagttgatacagacattcagtggcccaatggaatc
actcttgatttgatcaagggaagactctactgggtggattccaagctgcacatgctctgt
agtgtagacttgaatggagacaaccgtcggaaggttctgcagtcgccagactacctggcc
cacccttttgcccttactgtttttgaggatcgagttttctggacagacggtgagaatgag
gccatctacggcgcaaacaagttcacaggatcggatgtaactgtgctggccagcaacctc
aatgaaccacaggacatcattgtgtaccatgagctaattcagctgtctgggaccaactgg
tgtaacgagaagatggagaatggaggctgttccttcatgtgcctgccagctccacaaatt
aacaaacattcccctaaatatacatgtgtgtgtccgcaaggtcaaacactctcctcggat
ggcctgcgctgcagaccagaggcacctactgccgcccctcgagatggagggaggctgacc
cctcacccctctcaccctaaagcatctgcaatatcaaaggttgcctctgaaccagttcat
actgaaggaaacataagcacctccatacatgaagtaaattcatccgccaaaggatccgct
gctgcctgggctattctacctgtgttgttattggccatggctgctgcgggtggttactta
atgtggcgcaactggcagatcaaaaataagaagagcatgaacttcgataatccagtatat
ctcaagaccacagaggaagacctcaatatcgatatcacgagacacagtgcttctgtaggc
cacacatatcctgctatttcagtggtaaacacagaagatgacttgtcataa
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integrated database retrieval system
