Rhinichthys klamathensis goyatoka (western speckled dace): 130076670
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Entry
130076670 CDS
T09701
Symbol
vars1
Name
(RefSeq) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
130076670 (vars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rkg01007
]
130076670 (vars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rkg03016
]
130076670 (vars1)
Enzymes [BR:
rkg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
130076670 (vars1)
Amino acid related enzymes [BR:
rkg01007
]
Aminoacyl-tRNA synthetase
Class I (U)
130076670 (vars1)
Transfer RNA biogenesis [BR:
rkg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
130076670 (vars1)
Prokaryotic type
130076670 (vars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
GST_C_2
Arc1p_N_like
tRNA-synt_1e
Jag_N
Motif
Other DBs
NCBI-GeneID:
130076670
NCBI-ProteinID:
XP_056097813
LinkDB
All DBs
Position
Unknown
AA seq
1273 aa
AA seq
DB search
MDTLYISSHPDDFRSLLPLIAAEFCQTPPRIVHEDPPAEVGRSRPALVLEGAGATVLTGA
NAVSWYLAAAGKRTGSDKKQESQVWQWLSFAENELMPVACSVAFPLLGIMGVDKKLLQSS
RAELLRVLKALDETLAPRTFLVGEGVTLADMAVAMAALLPFKYALEPADRKSLVNVTRWF
NTCVNQPQFLKVLGKISLCEKMVPVTPKPSAAANATSTAAPDAATPDSTTGNGPPKTEAQ
LKKEAKKREKMEKFQQKKEIEEKKKMQPQTEKKAKPEKKELGVISYNIPTPSGEKKDVLS
PLPDSYSPQYVEAAWYSWWEKQGFFKPEYGRKNVSEPNPRGVFMMCIPPPNVTGSLHLGH
ALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLMRERKMTRHDLGREKFIQ
EVWKWKNEKGDRIYHQLKKLGSSLDWDRACFTMDTKLSFAVQEAFIRMHEEGVIYRSKRL
VNWSCTLNSAISDIEVDKKELTGRTLLPVPGYKEKVEFGVLVSFSYKIEGSDEEVVVATT
RIETMLGDTAVAVHPNDPRYQHLKGKMVVHPFCDRKMPIVFDDFVDMNFGTGAVKITPAH
DHNDYEVGERHKLPFINILDENGLLINVPPPFLGVKRFEARKTVLQALKDRGQFKEVKDN
PMVVPVCSRSKDIVEPLLKPQWYVDCREMGKQAADVVRNGELKIIPDHHLKTWFNWMDNI
RDWCISRQLWWGHRIPAYFVTVNDSSVKPGEDVDGHYWVSGRSKEEAREKAAKRFNVTAD
KISLRQDEDVLDTWFSSGIFPFSIFGWPNESEDLRVFYPGTLLETGHDILFFWVARMVMM
GLKLTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGISLEGLHSQLADSNLDP
LEIEKAKQGQKSDYPSGIPECGTDALRFALCAYTGQGRDINLDVNRILGYRHFCNKLWNA
VKFAMRTLGEGFVPCQKAQLCGSESVSDRWILSRLSAAVALCDNGFQAYDFPTITTAIYN
FWLYELCDVYLESVKPVLSRTDSEGQKQADICRQTLYTCLEVGLCLLSPIMPFVSEELFQ
RLPRRRPQDSPPSISVTRYPDPSEFCWHSEEADRQMEFVMSVVRTIRSLRADYNLTKTRA
DCYLQCIDSDTAALVQTYSLQIQTLSYSQTIHPVVGGDNTIPQGCAVAIASDKCTVHLML
KGLIDLEKEVTKLTAKEAELEKQMEKMKEKMAKNDYKDKVPVKVQEADAEKLRQNETELQ
KVKEAIENFRKMM
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggacactctttacatctcttcacaccctgatgacttcaggagtttgttacccttgatc
gctgctgaattctgtcaaactcctccacgaatagtccatgaggaccctccggctgaggtg
ggcaggtctcgtcctgcactggtcttagagggtgcgggcgccacggtgctcaccggtgcc
aatgctgtgagctggtacctggcagcagcggggaaacggacaggcagcgataagaagcag
gaaagtcaggtgtggcaatggctgagctttgctgagaacgagctgatgcctgtggcctgc
tctgtggcattccctctgctggggataatgggagttgataagaagcttctgcagagttcc
agagcagagctgctgcgtgttctcaaagctctagatgagactcttgcaccgcggacattc
ctggtaggagagggtgtgactctggctgatatggctgttgctatggcagcactgctgcca
ttcaaatatgcattggagcctgcagacaggaagtcattggtgaatgtgaccagatggttt
aatacctgtgtgaaccagccacaattcctgaaggtgttgggtaaaatctcactgtgtgag
aaaatggtgcctgtgacccccaaacccagcgctgccgccaatgccacatcaactgctgct
cctgacgctgctacaccagacagcacaactggtaatggtcctcctaagacagaggctcag
ctgaagaaagaggccaagaagcgagaaaagatggagaagtttcaacaaaagaaagagatt
gaggagaagaagaagatgcagcctcagactgagaaaaaggccaaacctgagaagaaggaa
ctgggtgtgataagctacaacatacccacgccttctggcgagaaaaaagatgtcctgagt
cctctgcctgattcttacagtcctcagtatgtagaagcggcctggtactcctggtgggag
aaacagggatttttcaagcctgaatatgggagaaagaatgtaagtgagccaaacccacgt
ggcgtgttcatgatgtgtattcctccacctaatgtgacgggatccctccaccttggtcac
gccttgaccaatgcaattcaggactccctgactagatggcacaggatgagaggagagacc
actctgtggaatcccggctgtgatcacgctggtatcgccacacaggtggtggtggagaag
aaactgatgagagagcgaaagatgaccagacatgatctcgggagagagaaattcatccag
gaggtctggaagtggaagaacgaaaagggagatcgcatctatcatcagctgaagaagctg
ggttcctctctcgactgggacagagcttgttttaccatggatactaaactgtcgtttgcg
gtccaggaggcatttatacgtatgcatgaggaaggtgtgatttacaggagtaagagactc
gtcaactggtcctgcaccctcaactccgccatctctgacatagaggtcgataaaaaggag
ctgacagggcgaacccttcttcctgtgccgggttataaggaaaaagtcgagtttggcgtg
ttggtgtctttctcttacaagattgaaggatcagatgaggaggtggtagtggccaccaca
cgtattgagaccatgcttggagacaccgctgtggctgtccaccctaatgaccccagatat
cagcatctcaaaggaaagatggtcgttcacccattctgtgacagaaagatgcccatcgtg
tttgatgactttgttgatatgaactttggaacaggtgctgtgaagatcactcctgctcat
gaccataatgattatgaggtgggagagagacacaaactacccttcatcaacatcctggat
gaaaatggtctactaatcaatgttcctcctccattcctgggggtgaagcgctttgaggcg
aggaaaactgtgcttcaggctctgaaagatagaggccagtttaaggaggtcaaagacaat
ccgatggtggtgcccgtctgcagccgttctaaggacatagtggagcctctgctgaagcct
cagtggtacgtggactgcagagagatgggaaagcaggctgcagatgtcgtcagaaatgga
gagctcaagatcatccctgaccaccacctcaaaacctggttcaactggatggacaacatc
agggactggtgcatctcacggcagttgtggtggggccacaggataccagcgtactttgtg
actgtgaatgattcttcagtcaaaccaggcgaggatgtggacggacattattgggtcagc
gggagatctaaggaggaagccagagaaaaagctgccaaacgcttcaatgtcactgcagac
aaaatctctctacgccaggatgaggatgtgttggacacttggttctcctcagggatcttc
cccttctccatctttggctggcccaatgagtcagaggacctgagagtcttctacccagga
acactgttagagacaggccacgatatcctgttcttctgggtggctcgtatggtcatgatg
ggcctcaaacttactggaaaactacctttcaaagaggtgtacctgcatgcagtggtacga
gacgcccatggcaggaaaatgagcaagtctctcggtaacgtcatcgaccctctggacgtc
atcactggcatttcactggagggtcttcactctcaactagcagacagtaatctagaccct
ctggagattgagaaggccaaacagggacagaaatccgactatcccagtggaattccagaa
tgcgggactgacgcgctcagatttgctctatgtgcttataccggtcaaggccgagacatt
aatctggacgtgaacaggattctgggatacaggcatttctgtaacaagctgtggaacgca
gtgaagtttgccatgaggaccctgggggagggatttgttccctgccaaaaagctcagctg
tgtggcagtgaaagtgtgtctgatcgctggattctgtcccgtctgagcgcagcagtagcg
ctgtgtgataacggattccaggcctacgattttccgacaatcaccactgccatttacaat
ttctggctgtacgagctctgtgatgtgtatctggaaagtgtgaagccggtgttgagcagg
acagattcagaagggcaaaaacaggcagacatctgcagacagactctctacacctgtctg
gaggtgggactgtgcctcctgtctcctatcatgccttttgtttctgaagagctcttccag
cggttgccaaggagacggcctcaggacagcccccccagcatcagtgtcacacgttatcca
gacccttcagagttctgttggcacagcgaggaggccgaccgtcagatggagtttgtcatg
tctgtggtcagaaccatccgatcactccgggccgattacaacctgaccaagacccgcgct
gactgttacctgcagtgcatagactctgatactgcggctctggtccagacatacagcctt
cagatccagacactgtcttactctcagaccattcacccagtggttggaggcgacaacact
atcccacaaggctgtgcggtggccatcgcctcggacaaatgcactgttcacctaatgctg
aagggtttgattgacttggaaaaggaggtcacgaaactgacggcaaaggaagcggagctg
gagaaacagatggaaaagatgaaggaaaagatggccaagaacgactacaaggacaaagtt
cctgttaaagtgcaggaggcagatgctgagaagctgaggcagaatgaaacagaactgcag
aaagtgaaggaagccatcgagaacttccgaaaaatgatgtaa
DBGET
integrated database retrieval system
