Rhinichthys klamathensis goyatoka (western speckled dace): 130076676
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Entry
130076676 CDS
T09701
Symbol
grik5
Name
(RefSeq) glutamate receptor ionotropic, kainate 5 isoform X1
KO
K05205
glutamate receptor, ionotropic kainate 5
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04080
Neuroactive ligand-receptor interaction
rkg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130076676 (grik5)
04082 Neuroactive ligand signaling
130076676 (grik5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rkg04040
]
130076676 (grik5)
Ion channels [BR:
rkg04040
]
Ligand-gated channels
Glutamate (ionotropic)
130076676 (grik5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
GyrI-like
Motif
Other DBs
NCBI-GeneID:
130076676
NCBI-ProteinID:
XP_056097826
LinkDB
All DBs
Position
Unknown
AA seq
1065 aa
AA seq
DB search
MPELPALLLSIYFRFLLVTVVTMPPSSRSQTPVLSSVRMAAILDDSSVCGRGERLALALA
RENINSVMEGPARAEVDIFELQKDSQYETTDTMCQILPKGVVSVIGPASSPASGSIVSHI
CGEKEIPHIKIGPEETPRLPYLRFASVTLYPSNEDLSLAIGAILRSFSYPSASLVCAKAE
CLLRLEELIRRFLISRETLSIRMLDDNLDPTPLLKEIRDDKIATIIIDANASISYLILKK
ASELGMTSAFYKYILTTMDFPLLWLDDIVDEQSNIVGFSMFNTTHPFYLEFIRSLNLSWR
EGCDINPYPGPALSSALLFDAVHVVVSAVQELNRSQEIGIKPLSCTSPQIWQHGTSLMNY
LRMVEYDGLTGRVEFNSKGQRTNYTLHILEKHRGGHKEIGIWYSNNTLLMNSTSLDINVS
ETLANKSLIITTILENPYMMRKVNYQEFEGNEQYEGFCVDMLRELAGILKFNFRIKLVDD
GLYGAPEPNGSWTGMVGELINRKADMAVASFTITSEREKVIDFSKPFMTLGISILYRVHI
GRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLSARLSPYEWYNPHPCLRERKDLLENQ
YTLGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRME
VPIESPDDLADQTNIQYGTIHGGSTMTFFMNSRYQTYQRMWNYMYSKQPSVFVKSTEEGI
ARVLNSKYAFLLESTMNEYHRSLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEISLAVLQL
QENNRLEILKRRWWEGGQCPKEEDHRAKGLGMENIGGIFVVLICGLIIAVFVAVMEFVWS
TRRSAETDEVRPLSCDRQYHSHTTVSVCQEMLTEFRNAVSCKKSSRLRRRRPLSSSLALR
HPTRITLGAPRPLRLVREMRLSNGKLYSGTGALTGSSGPGGGPSDMGPGPQRLLEDPLGA
NSTPSVALGPPAVTVPLPRGCTHVRICQECRRIQSLRTTSCTRIPPSSAPLPRLAPPPPH
SSSNTDSEGGGGPSPCRIGHSPPAKGCTLPPPQSSNNTDLMGEQK
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgccagcgctcctgctgtcgatttacttccgcttcctgttagtcaccgtg
gttaccatgccgccttcttcccggagccagacccctgttctatcatctgtacggatggcg
gcaattttggatgacagctctgtctgtgggcgtggggagcggttagctttagcgttagca
cgcgagaacatcaacagtgtgatggagggcccggctcgtgcggaggtcgacatatttgaa
ctccagaaagactctcagtatgagactacagatactatgtgccagattctgccaaagggt
gtggtctctgtgattggccccgcctccagtcctgcctcgggctccatcgtcagtcacatc
tgtggggaaaaggagattccccatatcaaaatcggtccggaagagactccgcggcttcct
tacctgcgctttgcgtctgtgactctgtatcctagcaacgaggatctgagccttgccatc
ggagccatcctacgctccttcagctacccatcggctagtctggtctgcgctaaggccgaa
tgtctgttgagactggaggagctgataaggcgttttctgatctctcgagagacgctgtca
atcaggatgctggatgacaaccttgaccccacgcctttactgaaggagattcgtgatgac
aaaatagccacaataattattgatgctaacgcatctatttcttaccttatactgaaaaag
gcatcagagttgggaatgacatctgcgttttacaagtacatcctcacgactatggacttt
ccgttgctgtggttggatgatatagtagatgagcagtcaaacatcgtgggcttctcaatg
tttaacaccactcacccgttttacctggagtttatcaggagcctaaatctgtcctggaga
gagggctgtgacattaacccgtaccccggaccagcgctgtcgtcggccctgctgtttgat
gcggtccatgtggtggtgagtgcagtgcaggaactcaaccggagtcaggagattggcatc
aagcctcttagctgcacctcccctcagatctggcaacacggaaccagcctcatgaactac
ctgcgtatggtggagtatgatggcttgacaggtcgagttgagttcaacagtaaaggccag
aggaccaattacaccctccatatcctggagaagcacaggggaggccacaaagagattggg
atctggtactctaataacactctgctgatgaactccaccagtctggacatcaacgtctct
gagactctggctaacaagagcctcatcatcaccaccatactggagaacccatacatgatg
agaaaggtgaattaccaagagtttgaggggaacgagcagtatgagggtttttgtgtggac
atgttgagagagctggctggtatcctcaagttcaacttccgcatcaaactggtggacgat
ggcctgtatggggcacctgaacccaacggctcgtggacgggcatggtgggagagctgatc
aacaggaaagctgatatggctgtagcttcttttaccatcacatctgagagagagaaggtc
attgacttctcaaaaccctttatgaccctgggcatcagtattctctacagggtccatata
ggcaggaagccaggttatttctccttcctggatcccttctcaccggctgtttggctcttc
atgctgctggcttacctcgctgtcagctgtgtgctttttctttctgctaggttgagtccg
tatgaatggtataaccctcacccgtgtctgcgtgagcgcaaagacctgctggaaaatcag
tacacgctcggaaacagcctgtggtttcctgtcgggggcttcatgcagcaggggtcagag
atcatgccccgagccctatccacacgctgtgttagtggggtctggtgggcattcactctt
ataataatctcctcatacacagcgaatctggctgcttttctgacagtgcagagaatggaa
gtgccaattgaatcgcccgatgacctggctgatcaaaccaatatacaatacggcaccatt
catggaggaagcaccatgaccttttttatgaactcccgttatcaaacgtatcagcggatg
tggaactacatgtattctaagcagcccagtgtctttgtgaagagcacagaggagggcatt
gcacgagtcttgaactcgaaatatgccttcctccttgagagcaccatgaacgagtaccac
cgcagcctcaactgcaacctcacccagatcggaggcctgctggacaccaagggttatggc
attggcatgcctctaggttctcctttcagagatgagatcagtctggcagtgctgcagttg
caggagaataacaggctggagatcctgaagagaagatggtgggagggagggcagtgtccc
aaagaggaagaccaccgtgccaaaggtcttgggatggagaacattggcggtatatttgtg
gtgttaatctgtggcctgattattgctgtgtttgtggctgtgatggagtttgtgtggtcc
acacgccgatcagctgaaacagacgaggtacggcctctctcctgcgaccgccaatatcac
agtcacactacagtgtccgtatgtcaggagatgttgacagaattccgtaacgctgtttcc
tgcaagaaaagttctcgccttcgccgccgccgccccctgtccagctctctggcccttcgg
caccccacccgcatcactttaggcgccccgcgacccctgcgacttgtcagagagatgcgc
cttagcaacggaaagctctatagcggtacgggagccctgacaggaagctcagggccagga
ggagggccctcagacatgggccccgggccccagcgactcctggaggacccattaggtgcc
aacagcaccccctcagtggccctgggaccgcccgcagtgacagtgcctctgccgcggggc
tgcactcatgtgcgcatatgccaggagtgccggcgtatccagagtctccgcacaacctct
tgtacacgaatccctccctcctcggcccctctgcctcgcctggctccgccccctcctcac
tcatcctccaatacagacagtgaaggtggaggtgggccgagcccatgccggataggacac
tccccaccggcgaaaggctgcactttaccgccacctcagtctagcaacaacacagaccta
atgggagagcagaaatga
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