Rhinichthys klamathensis goyatoka (western speckled dace): 130076678
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Entry
130076678 CDS
T09701
Symbol
itgav
Name
(RefSeq) integrin alpha-V
KO
K06487
integrin alpha V
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04081
Hormone signaling
rkg04145
Phagosome
rkg04148
Efferocytosis
rkg04510
Focal adhesion
rkg04512
ECM-receptor interaction
rkg04514
Cell adhesion molecules
rkg04810
Regulation of actin cytoskeleton
rkg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
130076678 (itgav)
04512 ECM-receptor interaction
130076678 (itgav)
04514 Cell adhesion molecules
130076678 (itgav)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130076678 (itgav)
04148 Efferocytosis
130076678 (itgav)
09144 Cellular community - eukaryotes
04510 Focal adhesion
130076678 (itgav)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130076678 (itgav)
04810 Regulation of actin cytoskeleton
130076678 (itgav)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130076678 (itgav)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rkg04147
]
130076678 (itgav)
04515 Cell adhesion molecules [BR:
rkg04515
]
130076678 (itgav)
04090 CD molecules [BR:
rkg04090
]
130076678 (itgav)
Membrane trafficking [BR:
rkg04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
130076678 (itgav)
Exosome [BR:
rkg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130076678 (itgav)
Exosomal proteins of epithelial cells
130076678 (itgav)
Cell adhesion molecules [BR:
rkg04515
]
Integrins
Integrin alpha subunits
130076678 (itgav)
CD molecules [BR:
rkg04090
]
Proteins
130076678 (itgav)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
LYRIC
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
130076678
NCBI-ProteinID:
XP_056097834
LinkDB
All DBs
Position
Unknown
AA seq
1047 aa
AA seq
DB search
MGKHLICCWLWALVALVYWKRALSFNLDISKPSVFSGPPGSYFGFSVAFFNPDNKQLNIL
VGAPRANTSDQTPSVVTERGAVFSCPWQKSGTCTQIEFDSTDDRKNSNGQQMEFKSNQWF
GATVRSSGDHILACAPLYQWSTYGFSEREPVGTCYLKKGNSIVEYSPCRSKSNSPEGQGF
CQAGFSADFVKKNRVVIGGPGSFYWQGQLISDDVTEVINRYNKEFFTPYSNQLSTKSAGA
QYDDSYLGYSVAVGDFNEDGEDDYVTGVPRGEKALGYVNIFNGRNMESMYNFTGTQMAAY
FGYSVAAVDINNDRKMDLLVGAPLFMDRGSDGKLREVGQVYVYLGKGGFTFNSVIKLTGS
EIYARYGSSICSVGDLNMDGYNDVAIAAPYGGQFHRGLVYIHNGRPTGPNPVASQVLEGT
WASASMPSSFGYAMHGGTDVDQNGYPDLIVGVFGADKAVLYRARPVISVNTTLDISPQIL
NPEDKSCTLPGTTTTVSCFTVKYCLKANGKGAESSLLFQVDLTLDRLKHKGATKRVLFLH
NKMSHYSKNMTVSNNQGPACEELQAYLIDDSEFRDKITPISVFMEYSLDYKTAADKTGLL
PILDQSAPTNVTKQAHILLDCGEDNICKPDLKLSVVSDQKEIYIGDDNPLTLDVIAENGG
EGAYEADLIVTLPSQADFIGVVRNIETLSRLSCAFKKENQTRVVVCDLGNPMKGGTKITA
GLRFSVHQLSEQDTEVKFDLQIKSSNQFNKTSNLVSVVTKLAVLARVELRGVSAPEQVFL
PIANWQPKDSPVLEDDIGPLVQHIYELRNRGPSTFSKAILDVQWPYRFNNGSLLYITKFE
VDGNMNCSSNRELNPLNVTNPRLTDKNETSASGDRAEGGNRHNVHRRDLEDKQGEENLEI
LDCGNAECQEIKCWVGRLEKGQSAILFIYSRLTVSTFLKAESQNKSYNVRSSASFSVIEM
PYKNINSELPTSTTSASLKVIWNSENPQPVPGWVVALAVLAGLLLLALLIFVMYKLGFFK
RVRPPQDDSTEKEQLQPQENGDRNTEA
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaacatctcatctgttgttggctttgggctctagtggctcttgtttactggaaa
cgagcactttcatttaatctggacattagtaaaccctcagttttctctggacctccagga
agttactttggattttctgtggctttcttcaatcctgataataaacaattaaacatactg
gttggtgcacccagagcaaacacatctgatcaaaccccatcggtagtcactgagaggggc
gctgtcttcagctgtccttggcaaaaaagcggcacatgcacacagattgaatttgacagc
actgatgacaggaagaattccaatggacagcaaatggagttcaagtcgaatcaatggttt
ggggccactgtgcgttcctctggggaccatattctggcatgtgctcctctctaccagtgg
agcacgtatggattctcagaaagggagcctgtcgggacatgttacctgaagaagggcaat
agcattgtggaatattcgccctgtcgctctaaatcaaactcacctgagggacaaggattt
tgtcaagcaggtttcagtgctgattttgtgaagaagaaccgtgtagttattggaggacca
ggaagcttttattggcaaggtcagctgatctcagatgacgtcactgaagtcatcaataga
tacaataaggagttttttactccttacagtaaccagttatcaaccaagtcagccggggct
cagtatgatgacagttatttgggttactctgtggctgttggtgattttaatgaagatggt
gaagatgattatgtcacaggagttcctagaggggagaaggctcttggttatgtcaacatt
ttcaatgggaggaacatggagtctatgtataatttcacaggcacacaaatggctgcttac
ttcggttattctgtagcagccgttgacatcaataatgacaggaagatggatttgttggtg
ggggctcctctgttcatggaccgtggctcagatgggaaactgagggaggttggtcaggtc
tatgtctacctaggaaaaggtggcttcaccttcaacagtgtcatcaaactcacaggctct
gagatctatgctcgatatggaagctcaatctgcagtgtgggagacctcaatatggatgga
tataatgatgtggctattgctgccccatatggtgggcagttccaccggggcctggtgtac
atccataacgggcgtcccacagggccgaatcctgtggcctctcaagttttagaaggaaca
tgggcgtctgcttccatgccttctagctttggttacgccatgcacggaggcacagatgtt
gatcagaatggatatcctgacctgattgtgggggtgtttggagctgacaaagctgttctg
tacagggctcgtcccgtcatcagtgtgaacaccacactggatatcagcccacagatcctg
aaccctgaagacaaaagctgcaccctacctggaacaaccaccacagtttcctgcttcact
gtgaaatactgtctgaaggcaaatggaaaaggagcagagtcttcccttcttttccaagtg
gatctgaccctggaccgcctcaaacacaagggagccaccaaacgggtgctgttcctccac
aacaagatgtctcattattcaaagaacatgaccgtctccaacaaccaggggccggcctgt
gaggaacttcaggcttatttaatagatgactcagaattcagggataagatcacacccatc
tctgtttttatggagtacagcttggattacaaaacagcagcagataagaccggcctgttg
cctatccttgaccaatctgcacctacaaatgtcaccaagcaggcccacatactcctggat
tgtggcgaagacaatatttgcaagccagacttaaaactgtctgttgtgagtgaccagaaa
gagatctacataggtgacgataaccccctgaccctggacgtcatagcagagaatggagga
gagggggcttatgaggccgaccttatcgtcaccctaccatctcaggcagatttcattggg
gttgtgcgtaacattgagacattgtctagactgtcctgtgcattcaagaaagagaatcag
accagagtggtggtgtgtgatcttgggaacccaatgaaaggaggaactaagataacagca
ggcttgcgcttcagcgtgcaccagctctccgaacaggacacagaagtcaagtttgacttg
cagataaagagctcaaatcagttcaacaaaaccagcaatctggtctctgttgtcacaaag
cttgcggtgttggccagagtggaattaagaggggtgtctgcaccagagcaggtgttttta
cccatcgctaactggcagccaaaagacagtcctgttctggaggatgacattggacctctt
gtacagcacatctatgagctaaggaacagaggacccagtacattcagtaaggccattttg
gatgtgcagtggccctacagattcaacaacggctctctgctctacatcaccaagtttgaa
gtggacggaaacatgaattgcagctcaaacagggagctcaaccctcttaatgtcactaat
cccagattaactgacaaaaatgagacctctgccagtggagacagagcagagggggggaac
agacacaacgtccaccgcagagacctggaggacaaacaaggggaagaaaacctggagatt
ctggattgtgggaatgcagagtgtcaagagattaagtgttgggttggtcgtctggagaaa
ggccagagtgctattctatttatttactccagacttaccgtgagcacgtttctcaaggct
gaaagtcaaaacaaatcgtacaatgttcgatcctcagcctccttcagtgtcatagagatg
ccatataaaaatataaattctgagttaccaaccagcacaacatcggcttctctgaaggtg
atctggaattcagagaaccctcagcctgtcccaggatgggtggtggctctggctgtcctg
gctggactgctgctgctggctctgctcatctttgtcatgtataagctgggcttctttaaa
cgcgtgcggccgccacaggacgatagtaccgagaaagagcagcttcagcctcaggagaac
ggagacagaaacacagaagcctga
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integrated database retrieval system
