Rhinichthys klamathensis goyatoka (western speckled dace): 130076731
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Entry
130076731 CDS
T09701
Symbol
loxhd1b
Name
(RefSeq) lipoxygenase homology domain-containing protein 1 isoform X1
KO
K24822
lipoxygenase homology domain-containing protein 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rkg03037
]
130076731 (loxhd1b)
04990 Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
130076731 (loxhd1b)
Cilium and associated proteins [BR:
rkg03037
]
Other cilia and associated proteins
Stereociliary proteins
130076731 (loxhd1b)
Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
Other domain-containing proteins
Others
130076731 (loxhd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PLAT
ATS3
DUF7755
Motif
Other DBs
NCBI-GeneID:
130076731
NCBI-ProteinID:
XP_056097903
LinkDB
All DBs
Position
Unknown
AA seq
2395 aa
AA seq
DB search
MPSKEKKTRQAQETEEEGENDDGEEKKSKSRRKGKISGPDCATKKKQKHAEDTVSDASEV
RKSQRGPEKKKKKKRKKKSSKSKDEEVKSSSEEDEDEHESKNKHKNLPDVVQVTEVGRNR
RKEKNPVESIMGSKDKKSKDEGGKKKKKKKEETDPEEEEDDDDSQKKKKKKKSKKGTGES
DDEGKKGKGKKKKSKNVDYVEIYENELRNYESEKVENYEDEYHKKKVYEVVTITGDVNGA
GTDANVFVTLFGEYGITPKLHLASKNRTAFEKNKTDVFRIKTHNVGPLKKIRIEHDNTGL
NASWYLDRVVVTDMNRPHLRFYFACNNWLSRAEGDGLFVRDLLGSPDPMDMPKYNKYVVS
VFTSDVKGSGTDADVFLNIFGENGDTGERRLDNDKNNFERGTEDKFTIEAPNLGRVRKIT
IGHNNKGSSAGWFVEKVILDDLGNKALYEFPINRWFAIDEDDGKIQRDVLVGGSQPTGIV
YNVQVVTGKVRGAGTNSKIHMIMHGSKALKNSGKVFLEGGTFERGLTDIFNVEIAALLSP
LSRVTIGHDNGGVSPGWYCEKVVVFCPFTGIEQTFPCSKWLDENESDGLIERELYEMVSL
RQKRQKKHPWSLWIWTSDLAGAGTDASILLQIFGEKGKSDEMKLDNKTDNFEQGQLDKFM
IELPDLGKLTKLRIWHEKRNPFAGWHLSRMSIMKTLTKETYKFPCERWLDTNEDDNEVVR
ELPATGELIPEPLPVIKYRVTVSTGNVSGGGTDAHVFLCLIGDLGDTGERTLINCKNNVN
KFEKGNADEFLIEAVSIGHVRRVRIGHDGRGGGCGWFLDKVLIREEGQAESQAVEFPCNR
WLDRGEDDGQIVRELVPFADGQRLYNVSYHIAVKTGNVSGGSSDSKVFVKFYGEKGDTSR
MMLVVSDNNLRNYFETGRVDVFTVDTADIGQINRLLIGHTNEGMRAGWFLDSVQIMVPNH
GNHYMFPSHRWLCRDEADGKTEVEIYPSEILDLEQLINYEVTVVTGDVFAAGTNANVFIQ
IYGDQGKTEVLNLSSRSNNFERGTTEIFKIEAKDVGKIFKIRICNDDSGIGSGWFLDRLE
VKRLVMAMVPKEKKEDKKKKKKKKKEDEEEEEEEEMREVVLTHRFPCDRWLAADEEDGET
VVELLAEENEELEENTYEVSVFTGNMMGSGSDANVFINVYGENGDTGERRLRKSNHLNKF
ERGQEDVFSITAVDLGTLKKLRIRHDNSHQSAWYLDRVEIVDTKDDTTYYFPCNRWLAVD
EDDGQIARELVPVDEAFMRKDEDEEESGATLGLEQKAMSTTYTLRIKTGEKKHAGTDANV
FAILYGENDDTGIINLKASKSHKNKFEKGMIDEFTVEAVDLGELHKLRIGHDEAGGSAGW
FLDWVEIDAPSQGQRLRFPCGRWLDRGEDDGAIVRDLYPAELQTELYTPFVPYEITTFTS
DVFAAGTDANVFIVLYGQKGLATQQKYLCVNKRERRLAFERSAEDMFIVELEDIGDIIEK
IRIGHDNKGTNPGWHLDRVEIRRLLRKGKGSETTIFPCERWLARSEDDGETVRELVPSDI
ITEKLLRDGTLKHSEIEVEDALETHTYTVTVRTGDMYGAGTDANVFLTVYGDLGDTGERK
LSKSESSSNKFERGAVDKFSIEAVDLGLVFKIRIRHDDSGAGADWYLDQVEVVDTDTDEV
YMFLCERWLSGKKEDKRIERTFFIKDYEGERNPQNVKKSMQNSKAGLDGNMNKKKKKKKA
VIMDEGPMIPYHFTVSTGADRDASTSSRVYVIILGPSDLETERLWLDLPGGKKCFASGGM
EHFMSYGLDVGEIKRVELGHNGATPESCWLVDELSVAVPTKGIQYNFLCKCWLAKDRGDG
LTARVFNILDATTISIIRKVVYEVTVVTGDTQNAGTDTNIFITVFGANGSTEEMLLMKNE
DRFERGQEDTFNLEIDDIAPLKKLRVRIDGTGSRPDWFLDKMIMRNLTTEEVYVFTYEEW
LSKTKGPKRTKVCELPAVVDDEEMVEKTTYIIQVKTSDLTAAGTDANVFLIVFGENGDTG
TLALKESSNRNKFERKQVDVFRFLDVLSLGELSKVRVWHDNKGPAPGWHLEFIDVKDELL
DETFRFPCDRWLAKSEDDGQIMRELACANNDILDLSEKTKYEIEITTAGSDDAETKDNVW
IVLEGRKGRSKEFMMENSKKKKFLRGATDSFEFSSKNVGEIVGICLGHLTKEKKVKNECF
WHVQEVLITEKELGNKFYFTCDARIPLAAKRDEFMTFECSKTVESFASKVRSLVPVKYEI
IVITGDVKEAATDANVFITLYGVNGDSGKRALRQKFRNLFERGRTDRFLLEMLDLGELLR
VRVEHDDSSTSSGWFLECVEVTNTANWVTTIFPCGKWLDLNKSDGQTHRVLYPKY
NT seq
7188 nt
NT seq
+upstream
nt +downstream
nt
atgccctcgaaggagaaaaaaacacgacaggcacaagaaaccgaagaagagggggagaac
gatgacggagaggagaagaaatcaaagtcgagaaggaaaggtaagatcagcggtccagat
tgtgccactaagaagaaacagaaacacgccgaggacacggtcagcgatgcatccgaggtg
aggaagagccagagagggccggagaagaagaagaagaagaagaggaagaagaaaagctct
aaatcaaaggatgaggaggtgaagagcagcagtgaggaagatgaagatgaacacgagtcg
aagaacaaacacaagaaccttccggatgtcgttcaagtgaccgaagtcgggagaaacaga
agaaaggagaagaaccctgtcgagagcatcatgggatccaaagataagaagtccaaagac
gagggggggaagaagaagaagaagaagaaagaagaaacggaccctgaagaagaggaggac
gacgacgactcccagaagaagaagaagaagaagaagagcaagaaaggaaccggtgagagc
gatgacgagggcaagaagggaaaaggcaagaagaagaaatccaaaaacgttgattatgtc
gagatctatgagaacgaactgaggaactatgagtctgagaaggtggagaactatgaggac
gagtaccacaagaaaaaagtgtatgaggtggtgaccatcactggagacgttaatggcgca
ggtacagacgccaatgtgtttgtcacgctgttcggggaatatggcatcactcccaaactg
cacctggccagcaagaatcgaactgcttttgaaaaaaacaaaactgacgtctttcggata
aaaacacacaatgtcggccctttgaagaaaattaggattgaacatgataacacgggcctg
aacgccagctggtatctggaccgggtcgtggtcacagacatgaaccggccacatctacgc
ttctacttcgcctgtaacaactggctgagccgagccgagggcgacgggctgttcgtgcgg
gaccttctgggcagccccgaccccatggacatgcccaaatataataaatatgttgtgagt
gtgttcacgtctgacgtgaaaggcagtgggacggatgctgatgttttcctcaatattttt
ggtgaaaatggagatacaggtgagagaagactcgacaatgataaaaacaactttgagaga
ggaacagaagacaagtttaccatcgaggctccgaatctgggccgagtgaggaagatcacc
atcggacacaacaacaagggctcctcggcgggatggttcgtggagaaggtcatactggat
gatttgggaaacaaagccttgtacgagtttcccatcaaccgctggtttgccatcgatgaa
gatgatggaaagatacagagagatgttctggttggagggagtcaacccaccggaatcgtg
tacaacgttcaggtggtgacggggaaagtccgaggtgcaggaaccaactctaaaatccac
atgatcatgcacggctccaaagccctgaagaacagcgggaaggttttcctggagggagga
acgtttgagcgcgggctcaccgacatctttaacgtggagatcgcagcgctgctcagtcct
ctcagtcgggtcaccatcggtcatgataacggaggggtcagtcccggctggtactgcgaa
aaggtggttgtgttctgtccgttcactggcatcgagcagacgttcccctgctctaaatgg
ctggatgagaacgagagcgatggactcatcgagagagaactctacgaaatggtctcgctc
aggcaaaagaggcagaaaaaacatccctggtccctgtggatttggacgtcagatcttgca
ggcgcaggaacagacgcctccatcttactccagatattcggggagaagggcaagtccgat
gagatgaaactcgacaacaaaactgataactttgagcagggccagctggacaagttcatg
atcgagctgccggatcttgggaagctgacgaaactgaggatctggcatgagaagaggaat
cccttcgccggctggcatctgagtcgaatgtccataatgaaaactttaacgaaggaaacg
tataagttcccatgcgagcgctggctggacactaacgaggacgataacgaggttgtgcga
gagcttccggccacaggcgagctgatcccagagccgctgccagtcatcaagtatcgcgtc
accgtctccacggggaacgtgagcggcggaggaacggacgcccatgtgttcctgtgtctg
atcggagatctgggagacacgggcgaacgcacgctaatcaactgcaagaacaacgtcaac
aagtttgagaagggcaacgctgacgagttcctcatcgaggcggtgtcgatcgggcacgtg
cgccgggttcggatcggtcacgacgggcgaggcggaggctgcggatggttcctggataaa
gtgctgatccgagaggaaggccaggccgaatcccaggccgtcgaattcccgtgcaacaga
tggttggaccgcggggaagacgacggccagatcgttcgggaactcgtgccgttcgcagac
ggacaaagactttacaacgtcagttaccacatcgcagtgaagacgggaaacgtcagcgga
ggaagctccgactctaaagtgttcgtcaagttttacggcgagaagggagacaccagcagg
atgatgctcgtggtttccgacaacaacctgcgcaactacttcgagacgggacgggtggat
gtgttcaccgtcgacaccgcggacatcgggcagatcaaccggctcctgattggtcacact
aacgaagggatgcgcgccggctggttcctggacagcgttcagatcatggttcccaatcac
gggaatcactacatgttcccgagtcaccgctggctgtgccgagacgaggctgatgggaag
acggaggtggagatttaccccagtgaaatactggacctcgaacaattgatcaactatgag
gtcacggtggtgacgggcgacgtcttcgccgccggcacgaacgccaatgtgttcatccag
atttacggagaccaggggaagacggaggtgctgaatctcagcagcaggtcaaataacttt
gaaagaggaacaacagagatattcaagattgaagctaaagacgtggggaagatcttcaag
atccgcatttgcaacgatgactctggcatcggatccggatggttcctggaccggctggag
gtcaagcgtctggtcatggccatggtgcccaaagagaagaaggaagacaagaagaagaag
aagaagaagaagaaggaggacgaggaagaggaggaagaggaagagatgcgagaggtggtt
ctcacacacagattcccctgcgatcgatggctggcggcggatgaggaggacggagagact
gtggtggagcttctggccgaggagaacgaggagctggaggaaaacacgtatgaggtgagt
gtgttcacggggaacatgatggggtccggatctgatgccaatgttttcatcaacgtctac
ggagagaacggagacacgggcgagcgacgcctgaggaagtccaaccacctcaacaagttt
gagcgcggacaggaggacgtgttctccatcacagccgtggatctcgggacgctgaagaaa
ctgaggatccggcacgataacagccaccagtcggcctggtacctggaccgggtggagatc
gtggacacgaaagacgacaccacgtattacttcccctgtaatcgctggttagcggttgat
gaagatgatggtcaaattgcccgagagctggtccctgtggatgaggccttcatgaggaag
gacgaggacgaggaggagtccggggccacactgggattggagcagaaagcgatgtcaaca
acatacacgctgaggatcaagacaggagagaagaaacacgcaggaacagacgccaatgtc
tttgcgatcctgtatggagagaatgacgacacaggaatcatcaacctgaaagcctctaaa
tcacacaaaaacaagtttgagaagggaatgatcgacgagttcaccgtggaggccgttgat
ctcggagaactccacaaactgagaatcggccatgatgaagcaggaggctcggcgggctgg
ttcctggactgggtggagattgacgctccttctcaaggacagagacttcggttcccatgc
gggcgctggctggaccgaggagaagacgacggagccatcgtccgagacctgtatcccgcc
gagctgcagactgagctttacacgccattcgttccctatgagataaccaccttcacgagt
gacgtcttcgccgcggggacggacgcgaacgtcttcatagtcctgtacggtcagaagggc
ctggcaacgcagcagaagtacctgtgcgtcaacaagagagagagacgcttggcatttgag
agatcagcagaagacatgttcatagtggagctggaagacattggagacatcatcgagaag
atccgcatcggacacgataacaaagggacgaaccccggctggcatctggacagagtggaa
atcagaagacttttaagaaaaggaaagggttcggagacaaccatcttcccctgcgagcgc
tggctggcccggtccgaggatgatggggagacggtgagagagctggtgccgtcggacatc
atcacggagaagcttctgagagacggcacgctcaaacacagcgagatcgaggtggaggac
gctctcgagactcacacgtacacagtaacggtgaggacgggcgacatgtacggcgccgga
accgatgctaacgtcttcctgacggtctacggggatctgggagacaccggagaacgaaag
ctcagcaagtctgagagcagcagcaacaagtttgagagaggagccgtggataagtttagc
attgaggcggtggatctgggtctggtgttcaagatccggatccggcacgacgactccggg
gccggggccgactggtacctggatcaggtggaggtggtggacacggacacggacgaggtt
tacatgttcctgtgtgaacgctggctctccgggaagaaggaggacaagcgcatcgagagg
accttcttcatcaaggactacgagggcgagaggaaccctcagaacgtgaagaagagcatg
cagaactccaaagctgggctggacggcaacatgaacaagaagaagaagaagaagaaggct
gtgatcatggacgagggtccgatgatcccgtaccacttcacggtgtcgacgggagcagat
cgcgacgccagcaccagcagtcgggtctacgtgatcatcctgggacccagcgatctggag
acggagcggctctggctcgatctgcccggcgggaagaagtgcttcgccagcggaggaatg
gagcatttcatgagctacggactcgacgtgggcgagatcaagagagttgagctgggccac
aacggagcgactccggaaagctgctggctggtggatgagctctcggtggccgttcccaca
aaagggattcagtacaactttctgtgcaagtgctggctggccaaagacagaggagacggt
ctgacggccagagtcttcaacatactggacgccacaaccatcagcatcatccgaaaggtg
gtttatgaagtgactgtcgtcacgggtgacactcaaaacgcaggaacagacaccaacatt
ttcataactgtgttcggggccaatgggagcacggaggagatgctccttatgaaaaatgag
gacaggtttgaaagaggacaggaagacacatttaacctggagattgatgacatcgcgccc
ctgaagaagcttcgagtccgcatcgacgggacagggagtcgtcctgattggtttcttgac
aagatgatcatgagaaacctgaccacggaggaggtgtatgtcttcacgtacgaggaatgg
ctctccaagaccaaaggacccaagaggacgaaggtgtgtgaacttccagccgtggtggac
gacgaggagatggtggagaaaaccacgtacatcattcaggttaaaaccagtgaccttact
gccgctggtaccgacgccaacgtgtttctgatcgtgttcggggaaaacggagacacggga
acactagcactgaaggagagcagcaacaggaacaagttcgagcgcaaacaagtggacgtt
ttccgattcctggatgtcctgagtctgggcgagctgtcgaaggttcgggtctggcacgat
aacaagggcccggcgcccggatggcacctggagttcatcgatgtgaaggacgagctcctc
gatgagaccttccgcttcccctgcgaccgatggctggccaaaagcgaagacgacggtcag
atcatgagggaactggcatgtgccaataatgatattctggatctcagtgaaaagaccaaa
tacgagatcgagatcacgacagccggttctgatgatgccgagacgaaggataacgtgtgg
atcgttctggagggcaggaaaggtcgatctaaagagtttatgatggagaactcaaagaag
aagaagtttttgcgtggtgccacggattcattcgagttttcctctaaaaatgtgggagag
atcgttggtatttgcttgggccatttaacgaaggagaagaaggtgaagaacgagtgtttc
tggcacgtgcaggaggtgctgatcacagagaaagagctgggcaacaagttctacttcacg
tgtgacgcacggattcccctggccgccaagagagacgagttcatgacgttcgagtgcagc
aaaaccgtggagagtttcgccagcaaagtccgcagtctggttcctgttaaatacgagatc
atcgtgatcacgggagacgtgaaggaagccgccaccgacgccaacgtcttcatcacgctc
tacggcgtcaacggggactccgggaagcgggcgctcaggcagaagttcaggaacctgttc
gagcggggccggacggaccggttcctgctggagatgctggatctgggagaactcctgcgg
gtccgggtggagcacgacgactccagcacgtcgtccggctggttcctggagtgtgtggag
gtcaccaacaccgccaactgggtgaccaccatcttcccctgcgggaagtggctcgacctg
aacaaatccgacgggcaaactcacagggttctctatcccaaatactga
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integrated database retrieval system
