Rhinichthys klamathensis goyatoka (western speckled dace): 130076764
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Entry
130076764 CDS
T09701
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130076764 (rlim)
Enzymes [BR:
rkg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130076764 (rlim)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130076764 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
Extensin_1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
SPT6_acidic
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
130076764
NCBI-ProteinID:
XP_056097956
LinkDB
All DBs
Position
Unknown
AA seq
819 aa
AA seq
DB search
MEGQDNADQGSSDQSETQRRRQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEIT
ADELLSRLRQVKDGPESPSNGTTEERREGPGATEVEGTEENPSGETLLDWLNTVRQTGNT
TRSGYRGNQSWRAVSQTNPNSGDFRFSLEINVNRNIAEQQTQTERLEGGQERADGPVSEP
ESLMETAEVVEEPVVDELAVIVEPELAVPSTLSLNGDVNAPDPPTIAPPNLASPTIAPPN
LASPTVAPPTVAPPTVAPPTVAPPTIVPPTIVPPTIVPPTIVPPTIVPLTIVPPNIVPPT
ITPPTITPPTITPPTIAPPTIAPPTIAPPTLDPPTLAPPTLAPPTLAPSTLAPSILAPST
VAPPTVAPPTVAPPTLAPPTLAPPTLAPPTLAPPTLAPPTLAAPTLAAPTLAPPTLPTVE
QPRRGQIRARSRSPEQRRTRARTARGRSPLNLERLDGLPPTQHGIPSRHPEILPEPQVEG
SSRTRQLFLSRQSTVDMETQELGAAPELPGTPQERETNAGEAGASGRRPPTIMLDLQVRR
VRPGEYRQRDSIANRTRSRSQTSNNTLLYETERGGFRRTFSRSERAGVRTYVSTIRIPIR
RISDAGLGEATSLALQSMIRQIMTGFGELSYFMDSDYPDSNREDSPPADLTDALGNPDAS
PETAASEADSHLPGHGVSNQGGLEARTEEREVEGGLPGAAGPRENRGRQRAPISLDETGS
LPFLRLAHFFLLNEEDDDQPRGLTKEQIDNLSMRNFGESDALKTCSVCITEYAEGNKLRK
LPCSHEYHVHCIDRWLSENSTCPICRRAVLVSTNRESVV
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcaggataatgcagatcagggcagcagtgatcagtctgaaacacaacgccgg
agacagctggaccggctggacagagaagaggccttctaccagtttgtcaacaatctcagc
gaggaagactataggctcatgagagacaacaatctgcttggcacgcctggtgaaattaca
gcagatgaactgttgagccgccttcggcaggtcaaggatggccctgagtctcccagcaat
ggcactactgaggaaagaagggaggggcctggtgcaacagaggtggagggcactgaagaa
aatcccagcggtgagacccttcttgactggctcaacacagtacgacagacggggaataca
acaaggagcggttaccggggtaaccagtcatggcgggctgtgagccaaaccaatcccaac
agtggtgatttccgtttcagcttggagatcaatgtcaatcgcaacatagctgaacagcaa
acgcagacagaaaggctggaagggggccaggaaagagcagatggccctgtgtctgagccg
gagagtcttatggagactgcagaggtggttgaggaaccagtggttgatgagctggctgtt
atagtagagccagagctggcagttcccagcaccctgtctctaaatggggacgttaatgct
ccagatcccccaaccatagctcccccaaacttagcttccccaaccatagctcccccaaac
ttagcttccccaaccgtagctcccccaaccgtagctcccccaaccgtagctcccccaacc
gtagctcccccaaccatagttcccccaaccatagttcccccaaccatagttcccccaacc
atagttcccccaaccatagttcccctaaccatagttcccccaaacatagttcccccaacc
ataactcctccaaccataactcctccaaccataactcctccaaccatagctcctccaacc
atagctcccccaaccatagctcccccaaccttagatcccccaaccttggctcccccaacc
ttggctcccccaaccttggctccctcaaccttggctccctcaatcttggctccctcaacc
gtggctcctccaaccgtggctcctccaaccgtggctcctccaactttggctcccccaacc
ttggctcccccaactttggctcccccaactttagctcctccaaccttggctcctcccacc
ttggctgctccaaccttggctgctccaaccttggctcctccaaccttgcctacagtggag
caaccacgtaggggtcaaataagggctcgcagtagaagcccggagcagcgacggacaagg
gctcgtactgcaagaggacgttcaccactcaaccttgaaagattggatggacttccgcct
actcagcatggcataccttctcgccatcctgagatcctgcctgagccccaggtagaggga
agctcaaggactcggcaattgtttttgtctaggcagagcaccgtggatatggaaactcaa
gagttgggagcagcacctgagttacctggaacaccacaggaaagagagacaaatgctggg
gaagcaggagcttcaggtcgtcgtcctccaaccataatgctggatttgcaggtacgtagg
gtgcgtcccggagagtaccgccagagagacagcattgctaaccgtacaaggtctcgttct
cagacctccaataacactttattatatgagactgagcgcgggggtttccgtcggactttc
tcccgctctgagcgggctggagtgagaacatacgtcagcactatccgcattcccattcgg
aggatctcagatgctggacttggtgaagccacttctttggctctgcagtctatgattcgt
caaatcatgactggcttcggtgaacttagctactttatggactcggactatccagactca
aaccgtgaagacagcccaccagcagaccttacagatgcactgggtaaccctgatgcttct
cctgaaactgctgcaagtgaagcggattcccatcttcctgggcatggagtctcgaaccag
ggtggtttagaggcacggacagaggaaagggaagtcgaaggtggacttcccggtgctgct
ggtcctcgggagaaccgaggcagacaacgggctcccatcagcctggatgaaactggatct
ctgccctttctgcggcttgcacacttcttcttgctcaacgaggaagatgatgaccagccc
agaggtctcaccaaagagcagattgacaacctatccatgcgaaactttggtgaaagcgat
gcactcaaaacctgcagtgtctgcattacagagtatgctgaaggcaacaaattgcgaaag
ctgccctgctctcacgagtaccatgtgcactgtatcgaccgctggctttcagagaactca
acctgccctatttgccgcagagcggttcttgtttccaccaaccgcgagagtgttgtctag
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integrated database retrieval system
