Rhinichthys klamathensis goyatoka (western speckled dace): 130076784
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Entry
130076784 CDS
T09701
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130076784 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130076784 (atrx)
03036 Chromosome and associated proteins [BR:
rkg03036
]
130076784 (atrx)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
130076784 (atrx)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
130076784 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
130076784
NCBI-ProteinID:
XP_056097987
LinkDB
All DBs
Position
Unknown
AA seq
2280 aa
AA seq
DB search
MRSQVYKGDEMTTDICRSSKLNTLVTKLHEFLGNSPDDESIDSQDISNGKMASSDLNIPD
EKMNEPGCSSEMTKPSSSRSKRKPSFVTKHTAVDEPECANESGGEHCTDDSMQSGLDINK
LPQGTVVVKPEPVANEAKDEFRGPEFRNRGSKVKEDGPRKRLDENLQEIFNCTACGQQVN
HFQRDSIFQHPALHVLICKSCFKYYMSDDISKDDEGMDEQCRWCAEGGNLICCDYCSNAF
CKKCILRNLGRKELSEIMNEESKWHCFVCCPEPLKDYVKTCEKVLLSLESRYKKPRGESD
KTKREDRKHKHTKREKTAVNGQDYASDGAGTVTFSCKTLKVPKELVKKTKKLIETTNGLN
RTFVQFLQHTSNGPDVKAVSYRHLKAFKSVLADLKKAHAALEDSLEKEFEEKGLKFQNGE
EQRPADSQTAGKTVVNSHHADPTTVRDDGLDCPTMDYNPVVEEENQQDSNSADVEMKESL
PLSPEEAQDLSEEGDRPEERVQSGERDRSGERDQSGERDQSGERDRSGERDRSGERGRSG
KRERSGERDQSGERGRSGKRGRSGKKERSAKRDQSGEREQSGDRDRSEERDQSGERGRSG
KRGRSGKKERSAKRDQSGEREQSGDRDRSEERDQSGERGRSGKRGRSGKKERSAKRDQSG
EREQSGDRDRSEERDQSGERGRSGKRGRSGKRDQSGEREQSGDRDRSGESEAKDQEMADN
PDFEESSVPAGEASLDKDIVSIPPSVPEELFEMVESLAVKKEDDAGNSTDSSDGKSTTKA
EVVESNKSLTKLGKKLVVKLTPVPLKITIKRDKSSERSPSEDMDGETLPKEGQDSRRSPR
MKTTPLRKSPEAKSKRKSRSSKAKEERSDPVEEQCDSDSDEVPEVLQTAALKASSDESET
ENCGKASGKRTKKKKLATRSTAKGKPKRKLDMGSSDSEQSDKSSTAKKRRTKKKKGRESD
SSNHNSDLEKEMKNLAKMGSGKKKSKGVKKEEEECSKEGKKGPKRSFERVRRSQREKAKP
KEESSSSDEEEEEKEEEKEADNSGEDSDQQKIKPILESVMASIDGFHQSSGDEVEIKAES
SQVDDDDDPENRIAKRMLLAQIKANYSSGADSSSDDENADKEDRDSRKKGKDGAKEQDES
EKEEEDETSDSGSDVDVKKGGRRHRLLRKKLTLSEGDSDEETPVKKKKETKKRGRRKVDS
DDSADSDFEQSLSGSSDASVLSEAVSEEEDENKSNKRKTRSSKRAGKDGERSYQKEKKKR
RRIKVQDSSSSAKSGEEGDGDGDGDEEGDDKGTPKNRKKIRKILKDDLLRTETRDALKEE
EDRRKRIAERERLREKLRETIVVEESSQIACPITTKLVLDEDEETKEPLVQVHRNLVTKL
KPHQVDGVQFMWDCCCESVKKVEKSSGSGCILAHCMGLGKTLQVVTFLHTLLLCEKLNFS
TALVVCPLNTVLNWLNEFEKWQEGLKDEESLEVTELATVKRPQERAYALQRWQEDGGVMI
IGYEMYRNLTQGRNIKSKKLKETFQKTLVDPGPDFVICDEGHILKNEASAVSKAMNSIRT
RRRVVLTGTPLQNNLIEYHCMVTFIKENLLGSVKEFRNRFINPIQNGQCADSTLVDVRVM
KKRAHILYEMLAGCVQRRDYTALTKFLPPKHEYVLEIRLTPLQCKLYRYYLDHFTGVGSA
LESGRGRAGTKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMEEFIASETEESSM
SLTSEDEKPKRKKKRGKGKDKGSDKSDSDELEVIKEWNTSSRGGNPEGRNRAEPVEEVRA
PSNSGPGSPSPDWYKEFVTEPDSEVLEHSGKMVLLFEILRMAEDVEDKVLVFSQSLISLD
LIEDFLELAGRAKEEGKVSPYKGEGKWFRNIDYYRLDGSTNALTRKKWAEEFNDTSNVRG
RLFLISTRAGSLGINLVAANRVIIFDASWNPSYDVQSIFRVYRFGQVKTVFVYRFLAQGT
MEDKIYDRQVTKQSLSFRVVDQQQIERHFTMNELTELYTFEPDLLDDPSEKKSKRATPML
PKDPVLAELLHSYKDQIVGYHEHDSLLDHKEEEALSEEDRKAAWTEYEAEKTGLSMRFNQ
QAYAQMGVGASNSYFPFNVAALASMSNQQLEDLINQGRQKVLEATSALKSVPREPLEDII
AQVWKENPSLPEAQVQSMALGRQAGYELEVKHREAIYRDVLGKQQTLMMYVQKVVANRKV
QEQQMALARQGMLLNQLAMQNGLSAPMNQMDLLGLYQQLGALQGLPSSQLGKNPGPSKGL
NT seq
6843 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcgcaggtttataaaggggacgaaatgactaccgacatctgcaggtccagtaag
ctgaatacattggtgactaaacttcatgagttcttgggtaattctccggacgacgaaagc
attgattctcaagacatttccaatggtaaaatggcatccagtgacttaaacatccctgat
gagaaaatgaacgagcccggttgctcctccgaaatgaccaaaccctcgtcttcacgctca
aagagaaaaccttcatttgtgaccaagcacactgctgtcgatgaacccgaatgtgcaaat
gagagtggaggtgaacactgcacagatgacagcatgcagagcggcctggatattaacaag
ttaccacaaggcacagtggtggtgaagccggagccggttgctaatgaagctaaagatgaa
ttcagaggtccggagtttcgtaaccgaggaagtaaagtgaaagaggacggaccacggaaa
cgtttggacgagaacctccaggagatatttaattgcacagcatgtggacaacaagtcaat
cattttcagagggattccatctttcaacatcctgcactgcatgttcttatctgcaagtca
tgtttcaagtattatatgagtgacgatatcagcaaggatgatgaagggatggatgaacaa
tgcaggtggtgtgcagagggtggcaatctgatttgctgtgactactgcagcaatgccttc
tgcaaaaaatgcattttgcgcaaccttggacgaaaagagctgtctgaaatcatgaatgaa
gaaagcaaatggcactgctttgtgtgctgcccagagccgctgaaagactatgttaaaacc
tgtgaaaaagttttgctcagtttggaatctcgttataaaaagcccaggggagaaagtgac
aagacaaagcgtgaagaccgcaaacacaagcataccaaacgggaaaaaaccgcagtaaac
ggacaggattatgcttcagacggagcgggaaccgtaaccttttcctgtaagacgttgaag
gttcccaaagagctagtcaaaaagaccaaaaaactaatcgagaccacaaacggtttgaac
cgtacttttgtgcaattcctccagcacacatcaaatggccctgatgttaaggcggtaagt
tatagacacttaaaggccttcaaatcagttttggctgatctgaaaaaggctcatgcagct
cttgaggactcgcttgaaaaagaatttgaagagaaaggcctcaagtttcagaatggagag
gagcaaagaccagcagacagtcaaactgcaggtaaaacggttgttaactcgcaccatgcg
gaccccacaactgtcagggatgatggtttggattgccctactatggactataatcctgtg
gtagaagaggaaaaccaacaggacagtaactcggctgatgttgagatgaaggagagcctt
ccactctcgccagaagaagctcaggacttgtctgaagaaggagaccggcctgaagaaaga
gtccagtctggagaaagagaccggtctggagaaagagaccagtctggagaaagagaccag
tctggagaaagagaccggtctggagaaagagaccggtctggagaaagaggacggtctgga
aaaagagaacggtctggagaaagagaccagtctggagaaagaggccggtctggaaaaaga
ggccggtctggaaaaaaagaacggtctgcaaaaagagaccagtctggagaaagagaacag
tctggagacagagaccggtctgaagaaagagaccagtctggagaaagaggccggtctgga
aaaagaggccggtctggaaaaaaagaacggtctgcaaaaagagaccagtctggagaaaga
gaacagtctggagacagagaccggtctgaagaaagagaccagtctggagaaagaggccgg
tctggaaaaagaggccggtctggaaaaaaagaacggtctgcaaaaagagaccagtctgga
gaaagagaacagtctggagacagagaccggtctgaagaaagagaccagtctggagaaaga
ggccggtctggaaaaagaggccggtctggaaaaagagaccagtctggagaaagagaacag
tctggagacagagaccggtctggagaaagtgaagctaaagatcaggaaatggcagataat
cctgactttgaggaaagctctgtgccagcgggtgaagcgtctctggataaagacattgtg
tctattccaccgtctgtcccagaggaactctttgagatggtcgagagtctcgctgtaaag
aaagaagatgatgctggcaactcgaccgattccagtgatgggaaatcgacaaccaaagcg
gaggttgtggaatccaataagagccttacaaaactgggtaaaaaactcgtcgtcaaacta
acacccgttcctcttaaaattaccataaagcgagataagagcagtgaacggtcaccttca
gaagacatggatggggagacgttaccaaaggagggtcaagatagccgacgctcccccagg
atgaagaccacacccttacgcaagtcgccggaggcaaagagcaaacgtaaatcaaggtcg
tcaaaggcaaaagaagagcgcagtgacccagtcgaggagcagtgtgattcagactcggat
gaggtccctgaggtcctgcagacggcggctttgaaggccagctctgatgagagtgaaacc
gaaaactgcgggaaagcttctgggaaacgcaccaagaagaagaaattggctactcgctca
actgcgaaagggaagccaaagcgcaaactcgatatgggctcctcggattcggagcagagt
gacaagtcgtcaacagcaaaaaaaagaagaaccaaaaagaagaaaggcagggaatcggac
tcctcaaaccacaactccgatcttgagaaggagatgaaaaacctggccaagatgggtagt
gggaaaaaaaaatccaaaggcgtcaaaaaggaagaggaggaatgcagtaaagagggcaaa
aaagggcctaaaaggtcattcgagcgggtacgaaggtctcagagagaaaaggctaaaccc
aaggaagagtcttcctccagtgacgaagaggaggaggagaaagaggaggagaaggaggct
gataactcaggagaagacagtgatcagcagaagattaaaccaatacttgagtctgttatg
gctagtattgatggtttccatcagtcatcaggtgatgaagttgaaataaaggctgaatcc
tcccaggtggatgatgatgacgaccctgaaaatagaattgccaagaggatgcttttggcg
cagatcaaagccaactattcgtctggagctgatagttcatcggatgatgaaaacgcagac
aaagaggatagggattcacgaaagaaaggaaaagatggtgcaaaggagcaagacgagagc
gaaaaagaggaagaggacgaaacttcagactcgggctcagatgtggacgtgaagaaaggt
ggacgcaggcaccgtttgctgcgtaagaagttgactctaagtgagggtgactctgatgaa
gagaccccagtcaaaaaaaagaaagaaaccaaaaagagaggccggcggaaagtggacagt
gatgattcggcagactcagactttgagcagtcgctctcgggctccagtgatgcgtcagtg
ctcagtgaggctgtgagtgaagaagaggatgaaaacaagagcaataaacgcaaaacacga
tcgtccaagagagcaggcaaagacggtgagagaagttaccagaaagaaaagaaaaaacga
cgtcgcattaaggttcaagactcctcatccagtgccaagagtggagaggaaggggatggg
gatggtgatggtgacgaggaaggggacgacaaaggaacacccaaaaatcgcaagaagatc
cgcaagatccttaaagatgaccttctgcggacagagacccgagatgccctgaaggaggaa
gaggacaggaggaaacgcatcgctgagagggagcgcttgagggagaaactacgagagact
atcgtggtggaggagtcgtcgcagatcgcgtgtcccatcaccactaaactggtgctcgat
gaggacgaggagaccaaggagccactagtgcaggttcacaggaacctggtgaccaaactc
aaaccccatcaggtggatggtgtgcagttcatgtgggactgctgctgtgagtcggtgaag
aaggtggagaagtcctctggctccggctgtattctggcccactgcatgggtctgggcaaa
accctccaggtggtgacgtttctccacactcttcttctgtgtgagaagctgaacttctcc
acagctctggtggtgtgtcctctcaacactgtgctcaactggctcaatgagtttgagaag
tggcaagaaggcctgaaggacgaggagagtttagaggtgacggagctggccacagtgaag
agacctcaggagagagcgtacgctttacagcgctggcaggaggacggcggcgtcatgatc
ataggctacgagatgtaccgcaacctcacgcaagggcgcaacatcaagagcaagaagctg
aaggaaacctttcagaaaacactagttgatccaggtccggattttgtcatctgtgatgag
ggtcacatcctgaagaacgaagcgtctgccgtctccaaagccatgaactccatcaggact
cgtcggcgggtggtgctgacgggaacgccactgcagaacaacctcatcgagtatcactgt
atggtgaccttcattaaggagaacctgctgggatcagtgaaagagttcagaaatcgcttc
atcaaccccatccagaacggccagtgtgccgactccacgctcgttgatgtccgtgtcatg
aagaaacgagcgcacatcctctacgagatgctggcgggatgtgtccaaagaagagattac
actgcccttacaaaattcctcccaccaaaacacgagtatgtgttagagatccggttaaca
ccccttcagtgcaagctttatcggtactatctggatcactttacaggtgtcggttctgcc
ttggagagtggaagaggtcgtgcgggaaccaaactcttccaggatttccagatgctcagc
agaatctggacccatccgtggtgcctccagctggactatatcagtaaagaaaacaaggga
tacttcgacgaggacagtatggaggagttcatagcctcggagacagaggagtcctccatg
agtttgacctctgaagacgagaagcccaaaaggaagaagaaacgaggcaaaggaaaagac
aaaggctcagacaagtctgacagtgatgaactggaagtgattaaggagtggaacaccagc
tctcgtggaggaaaccctgaggggaggaaccgagcagagcctgtggaggaggttcgggcc
ccgtcaaactccggtcctggcagcccatcaccggactggtacaaagagtttgtgaccgag
ccagattcagaggtgctggagcattctgggaaaatggttctgctttttgagatcctccgc
atggctgaagacgtggaagataaagtgttggtgttcagccagtctctcatttctctggac
ctcatcgaggattttctggagttggcaggcagagccaaagaggaagggaaagtttcaccg
tacaaaggtgagggcaagtggttcagaaacattgactactaccgcctggatggttccacg
aacgccttgaccaggaagaaatgggcagaggagttcaatgacaccagtaatgttcggggt
cgattgttcctcatctcaaccagagctggttctctcgggatcaacttggtagctgcaaac
agggtcatcatttttgatgcctcatggaacccatcctacgacgttcagagtattttcaga
gtctatcgctttggtcaagtgaagactgtgtttgtctacaggtttttggctcagggaacc
atggaggataagatctatgaccggcaggtcaccaaacagtcgctgtccttcagagttgtt
gaccaacagcagattgaacgtcacttcacgatgaacgaactgacggagctctacacattt
gagcccgacctgctggacgatccctctgagaagaagagcaagcgggccacacccatgttg
cccaaggatcctgtccttgcagaactgcttcacagttacaaagatcagatcgtcggctac
cacgagcatgactctttgctggaccacaaggaggaagaggcactgagtgaggaagatcgc
aaggcagcgtggaccgaatacgaggccgagaagacgggtctgtccatgcgtttcaaccag
caggcctatgctcaaatgggcgtgggagcatcaaactcctacttccccttcaacgtggcc
gccttggcctccatgagcaaccaacagttggaggatttgattaaccagggcaggcagaaa
gtgttggaggccactagcgctctgaagtcagtgcctcgggaaccactggaggacatcatc
gcgcaggtgtggaaggagaatccgagtttaccggaggcccaggtccagtccatggctctt
gggaggcaggccggctacgagctggaagtcaaacacagggaggctatttaccgtgatgtc
ctcggcaagcaacaaactctgatgatgtacgtgcagaaggtggtggccaaccgtaaggtg
caggagcagcagatggccctggcgagacaggggatgctcctcaaccagctggccatgcag
aacggcctctcggcccccatgaaccagatggacctgctgggcttgtaccagcagctcggg
gcgctccagggcctgccctcctctcagctgggcaagaacccgggcccgtccaagggcctg
tag
DBGET
integrated database retrieval system
