Rhinichthys klamathensis goyatoka (western speckled dace): 130076785
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Entry
130076785 CDS
T09701
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM35-like
KO
K12012
tripartite motif-containing protein 35
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130076785
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130076785
BRITE hierarchy
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-C3HC4_4
Prok-RING_4
U-box
zf-Nse
Sina_RING
DUF4200
Fib_alpha
Apolipoprotein
AAA_11
Tweety
zf-ANAPC11
DUF1664
FUT8_N_cat
Histidinol_dh
ALMT
zf-RING-like
HJURP_C
zf-RING_10
FliD_N
MYO6_lever
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
130076785
NCBI-ProteinID:
XP_056097989
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MDSKSVEELSCPVCFEIFKVPVILSCSHSICKECLQQFWRTKKTQECPVCRRRSSKDDPP
VILVLKNVCDSLIKEGNEKRSSGSEEICSLHSEKLKLFCLEDKQPVCLVCINSEKHTNHT
FRPISEVLSSYKEEFNTALTSLLNKLEHGEEMKKKCDETLEHIKSQAEHTERQIKEEFEK
LHQFLRDEEEATITALREEEEQKKQRMKEKLEEMNTHISALSHTLRDMEEMMKDNDVSFL
KNYKVSMERVQISQPDPRMSSGALIHVWRYLGNLPFRVWKKMLETVQHTPLTLDPNTAAS
WLTLSADLTSVSYSRVGKKIPDNPERIDRYACVLGSEGFNSGTHCWDVEVGDNTCWSLGI
TTASNQRKGQVFFNSNVWCVDYRNRKYGSQSPEQPGTVFTVKQKLQRVRVQLDYDRGTVS
FSDPETNTHLLRFRTSFNDTVFPFFFNHCTTSPLRILPVKLYYSRKSVKIS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggattcaaaatctgtggaagagctttcttgtcctgtttgctttgaaatcttcaaggtt
cctgttattctgtcctgtagtcacagtatttgtaaagagtgtctacaacagttctggaga
actaagaaaactcaggagtgtcctgtctgcaggagaagatcctcaaaagatgatccacca
gttattctcgtgttaaaaaacgtgtgtgattcattgataaaggagggaaatgagaaacgt
tcatcaggatctgaggagatctgcagtttacacagtgagaaactcaaactcttctgtctg
gaggacaaacagcctgtgtgtttagtgtgcataaactcagagaaacacaccaatcacaca
ttcagacccatcagtgaagtgctttcatcttacaaggaggaatttaatacagcactgacg
tccttactaaacaagctcgaacatggagaagaaatgaagaaaaagtgtgatgaaacactt
gaacacatcaagtctcaagctgagcacacagagcgtcagattaaagaagagtttgagaag
cttcatcagtttctcagagacgaagaagaagctacaatcactgcactgagggaggaagag
gagcagaagaagcagaggatgaaggagaagctggaggagatgaacacacacatctcagct
ctttcacacacactcagagacatggaggagatgatgaaagacaatgacgtctcgtttcta
aagaactataaagtctcgatggaaagagtccagatctcacagccggatccacggatgagt
tctggagctttgattcatgtgtggcgttatctgggtaacctgccgttcagagtctggaag
aagatgctggaaactgtccaacacactccgttgactctggatccaaacacagcagcttct
tggctcacactctctgctgatctgaccagtgtgtcgtacagtcgtgtaggtaaaaagatt
ccagataatccagagaggattgacaggtatgcatgtgtcctgggatctgagggctttaac
tcaggaacacactgctgggatgtggaggttggagacaatacatgctggagtcttggaata
accacagcatcaaaccaaaggaagggacaggttttctttaactctaatgtctggtgtgtg
gattacaggaaccgcaaatacggctcacaatccccagagcaacccggcactgtctttact
gttaaacagaagctccagcgtgtgagagttcagctggactatgacagaggaacagtgtca
ttctctgatcctgaaactaacacacatttactcagattcaggacatccttcaatgacaca
gtctttccattcttttttaatcactgcacaacttcccctctgaggatcttaccagttaaa
ctttattacagcagaaaatctgttaaaatcagttaa
DBGET
integrated database retrieval system
