Rhinichthys klamathensis goyatoka (western speckled dace): 130076797
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Entry
130076797 CDS
T09701
Symbol
cica
Name
(RefSeq) protein capicua homolog
KO
K20225
capicua transcriptional repressor
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130076797 (cica)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
130076797 (cica)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_Cic_C
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
130076797
NCBI-ProteinID:
XP_056098009
LinkDB
All DBs
Position
Unknown
AA seq
2444 aa
AA seq
DB search
MKPIKKQERRSPPSTRAKGVKKRMVDSSPQEEKRETEEIPQISTTSPKRHISSNSDSSQE
GPLRRSGSPEKEGIHSDGVLNIAVDFGKTDEPPGNSKSAGTQSDSNSSTTSASNSPNPSS
NRKTATFKARVPKKKYTSEHCAGNHGNANTPSTPPQSSSSSHNSTGANQVPAASAAHTDP
HSQSQQAVDSITEYGHNNIMGPTGRTAGECGEKDGTSVSSPQRCSSTDTASEHSAELEVT
ASGCDSHSNSQKPQAHSTTPSQESLSSGLAGVLAKGLKNQRVLARQGPRLGEGWPHDRGR
GMSGVFRTGVVRRVSEAHGSVEVQLNGEKTICKYPFRVATDSVDLILDASPPGVAPVAIG
TQVCVPFKGGDEGSEGAQQCYREGIITQVDQHPAVSFPYRVQLREELSDERKERRAVEDD
GRAISAQAVWVSRQNLRLLVPPWDLEPPQPAEPGIDCRRVREREWEEREDMEVFRLTAFK
VQSLLHPVTVPFTSSHSSSSAINTAITSVFSVAPNRDYDHHREKDQERDLHMHLEREREQ
DRERERHKHHPLHPSTPEEDMEVSRLSQLRDGGITAAMGSKALGVSSQHRHILSKPNYLS
PGRGLSTPIAPHLPLAPHPNHPPMLLGLDSATGAAVISSTPQLPPLPPSSSRGSLDKTPS
SNSHGASGGGSGSSCSSSRSRTPLTAAQQKYKKGDVVCTPTGIRKKFNGKQWRRLCSREG
CSKESQRRGYCSRHLSMRTKEMEAGGGVGRERSGASSTGTLTPDLRLGGRTSSEYDWDDN
SRDSSEASSRGGDSRPRLVMTSLIPQELPRELSRFDFDECEAANMLVSLGSSRSCTPSFS
PVSNQSPFSPAPSPSPTLFGFRPANFSPITAPSPLTPRRPRHLSGTKIPGTPGTERERHI
SGIVPTFQTNLTFTVPMSPSKRKLDAPHPPLPSASDYAKSDPQLNDPSLSLNAAAFRVLS
PQSQPTTPSSLSFPRQRNITSRPSSSAASTPPPMLVSPTPPSPLPQDPRRIVPLRDSPVI
VRNPDVPLAKFSDSPLSRRGSSRSREHSQPPHHAVGLQAPVPINGAATNGAVLLRNPAPT
LVLVTSSQSLTPVAPGHPTHSNSSTLNVSTSNANTGPVLAISGSGSKEQERKSGGHGDAG
GALPQPVACHPSPTALLPLILPAESPHPAPRKDIIMGRPGTVWTNVEPRSVPVFAWHSLV
PFLETSQTKMSTQPADGLTLVNQSKEPRCGVALVTEGLVDHPAAPERGSPSCPPPSAEDP
PVERGGDSETESDADDLFFPVVAQDPAPSISSVKRRTQSLSALPKDVDKKREKDHIRRPM
NAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFRAH
PDWKWCNKDRRKSLSEGRGTPGAKEARERSVSESTEAHSTSQGTDHKGAGPSWTSPRSDG
HRGSMGGQLHRPRAFSQSAVHTLERREEETDLESAGLFQPRTPAHPQQPSEDVTSDEEHM
VICEEGDDDVIEDSFADGSIDLKCKERVTDSDDENDHADEADSKRTFQPVVRSSLALSLA
GTTGNKDKEGREENLEKKKRGMGGAELNNGGPKGGGGGGHVPFHINSASVSSIKTTLLHD
AGTYYSHGTARMAPTIVTNVVRPITSTPIPIASKPVDGTLPPDGKPKLLIGAGGAGGGGY
FSSSSPKPNGQGGLVTGLVLGGAFPNQPTVQLITPPHPTPCNGAPSNSAGPLPLLHHQFL
PTASITPSSGGKPVTQVQYILPTLPATANPNSPSSQQTSSVLALPSATPTHVTLANGVHS
GAGQGIRYASVPAVGGVSPGGGVQAQSPVLQSKMLVPMATVGTGSTPPQPISLVGPPLPV
QNGAQPGSKIIQIAPMPVVQTNVHPGGSVHTGSSFPVSMPTATVMAPGPTPSQTVLLTPP
PTRITYVQSTPGVATPLPLGSTPAVSSTQQTPSPVGPSPVATLGFTAIAPAGQALVQPIV
ASQPPLLAQCPPPSGLSQPAQASTATRQLVTAIYPSLAGGVVSVTAVPQSTPSSTSVPAS
SSTPQAKTSSAVAAQPHTQTDAQLQSQVNMQMENERGAESRKEMEKQRDLVVSKDGHQAP
PSGLEESVQPICTSHKHKGQHCEGKEDGKKGSKMEREYARDVGGGLSQTERVETARAMDG
ETETQAETNNKDESRESGRRESSVLDPPPPPLQTDTPSAKKAKFRPPPLKSTADAGDKTL
FGSTFEERLKELPEFKPEEVLPSPNLQSLATSPRAILGSYRKKRRNSTDLDSADDPSSPR
RKSRRLSSCSSEPNTPKSAAKCEGDIFTFDRAVGETEHILEELDRVPPSSLRRMLDQRRA
LVMQLFQEHGFFPSAQATAAFQARYSDTFPNKLCLQLKIREVRQKIMQTAGSSEIVGGVA
LAGSDFASTSGPSNPAPRENSEPEERTRATEEPKKDAGDPQESR
NT seq
7335 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccattaaaaagcaagaaaggcggtcgcccccctccactcgtgccaagggagtt
aagaagaggatggtggatagtagcccacaggaagagaagagagaaactgaggaaataccc
caaatttcaactacctctcccaagagacatatctcctcaaattctgactcatcacaggag
gggcctctgagaagaagtgggtctccagaaaaggaggggatccacagtgatggggtcctc
aatatagcagtggattttgggaagacggatgaaccccccgggaactccaagtctgctgga
acacagagtgacagcaacagtagcacgaccagtgccagcaatagccccaacccttcgtct
aatcgtaagacggccacttttaaggcccgcgtgcccaagaagaaatacacttcggagcac
tgtgccggaaaccatggcaatgccaacactcccagcacacccccacagagcagcagcagc
tctcacaatagtactggtgctaaccaggtcccagctgcctctgctgcacacacagaccca
cacagtcaaagccagcaggctgtggacagcatcactgagtatggacacaacaacataatg
gggcccacaggaagaactgcaggtgagtgcggagagaaggatgggacgagcgtatccagc
ccacagcgttgctcttcaaccgatacggccagcgaacactcggccgaactagaagtaaca
gcttcaggatgtgattctcactccaactctcaaaagccacaagcacatagcacaacacct
tcacaggagagcctgtcatctgggttagccggagtcctcgctaaaggtcttaagaatcag
agagttctggcccgacagggtcccagattaggggaaggctggcctcacgatcggggtcgg
ggtatgtcaggagtgtttcgcactggtgtcgtacggagagttagtgaggcgcatgggagt
gtggaggtgcagctaaatggagaaaagaccatatgcaagtacccttttcgagtggctact
gattctgttgatctcattctagatgcgtcacctcctggtgttgccccggtggctataggc
acacaagtttgcgtcccctttaaaggtggtgatgagggcagcgagggagcccaacagtgt
tacagagaaggtataatcactcaagtagatcaacatccagctgtttctttcccataccgt
gtccagctacgggaggaactatctgatgagagaaaggagaggagagctgtagaggatgat
ggaagggccatcagtgctcaggccgtttgggtatcacgacaaaatcttcgcctcctggtt
cctccttgggacttagagccaccccagccagcagagccagggattgattgtaggagggta
agagaacgagaatgggaggaaagagaggacatggaggtgtttcgactgacagcgtttaaa
gttcagagtttgttgcaccctgtcactgtacctttcacctcatcccattcttcgtcttct
gccattaacactgccatcacgtctgtattcagtgtagccccaaacagagactatgatcat
cacagagagaaggatcaggagagagacctgcatatgcacttagagagagaaagggaacaa
gatcgcgaaagggagaggcacaagcatcatcctcttcatccatccaccccagaggaggac
atggaggtcagccgtctcagtcagctaagggatggcggcatcactgcagccatgggtagc
aaagctcttggtgtttcttctcagcatcggcacattctttctaaaccaaactacctcagc
cccgggagagggcttagcaccccaattgcaccccatctgccccttgctcctcacccaaat
cacccccctatgctcctgggcctagattcagccacaggtgctgcagtcatctcctccaca
ccccagctgcctccgttgcctccaagctcttctcgaggctccctggacaagacccccagc
tccaactcgcatggtgcatcagggggaggctctggatcctcgtgctcctcgtcacgttcc
cgcacacccctcaccgccgctcaacaaaagtacaagaagggcgatgtggtatgcacccct
acaggcatacgcaagaagttcaacggcaagcagtggcgcagactgtgttcacgtgaaggc
tgctcaaaggagtcacagcgccgcggctactgctcacgacatctctccatgcgcaccaag
gagatggaagccggaggcggggtgggccgagaaagaagtggcgccagtagcacgggcact
ctcacacctgaccttcgtttaggtggacgcaccagcagcgagtatgactgggacgacaac
tcacgagacagcagtgaagcaagcagtcgtggcggggactctcgaccacgtctggtgatg
acttctctcataccgcaagaactgccacgtgaactatcccgctttgactttgatgagtgc
gaggctgcaaacatgctggtctcacttggcagctctcgctcatgcacgccctcattctca
cccgtatccaatcagtcaccattttcccctgcaccttccccctcacccacactatttggc
ttccgccccgctaattttagccccatcacagcaccttcacctctgacccctcgccgccct
cgtcacctcagtggcacaaagatcccgggcacccccggcacagaacgtgagcgccacatc
tctggcattgtgcccacttttcagaccaacctcacgtttactgtgcctatgagccctagt
aaacgcaagttggatgccccacaccccccgctgcccagtgcatcagactatgcgaaatct
gatccccaactcaatgaccccagcctcagcctcaatgcagcagcattcagggttctttcc
ccccaaagccagcctaccaccccctcttctctgtctttccctcgacagaggaacatcaca
agtcgaccctcatcctctgctgcctccactccacccccaatgctggtttctcccacacca
ccctcacccctgcctcaagatccacgtcgtatcgttcccctacgcgattcacctgtcatt
gttcgtaacccagatgtgccgttggcaaaattcagtgatagtcccctgagccgtagagga
agctcacgctctagggagcacagccagcctcctcaccatgctgtgggtcttcaggccccc
gttcccattaacggtgctgccaccaacggagccgttctcctccgcaatcctgctcccacc
ttagtcctggtgacctcctctcagtcattgacacctgtggctcctggacatcccacacat
tcaaactcttccactttaaatgtgtccacctctaatgcaaacactggacctgtcctggca
atatctggctcaggaagtaaagagcaagagaggaaatcaggtggccatggagatgccggt
ggtgctcttccacagcctgtggcttgtcatccttcacccacagccctgttgcccctcatc
ttgccagccgagtcccctcaccctgctcctcgcaaagacatcatcatgggacgacctggc
actgtttggaccaacgtggagccccgctctgtgccagtgtttgcgtggcattcattggtt
ccttttctggagaccagccaaacaaaaatgtccacgcagcctgcagatggcctaacactt
gtaaatcagagcaaagaacctcgctgtggagttgcccttgttactgaaggacttgttgac
catccagcagcaccagagagaggttccccatcttgcccccctccttctgctgaagaccca
cccgtggagagaggaggcgacagtgagaccgagagtgatgctgacgacctgttttttcca
gttgtagctcaagaccctgctccatccatcagctcagtgaaaaggcgtacacaatctctc
agtgcactcccgaaagatgttgacaagaagagggaaaaggaccacatcagacggccaatg
aacgcttttatgatctttagtaagaggcaccgggcactggttcatcagcggcaccccaac
caggacaaccgcactgtcagtaaaatactgggcgagtggtggtatgcgttgggacccaaa
gagaagcagaagtatcatgatcttgccttccaggtgaaggaggctcatttccgtgctcac
cctgattggaaatggtgtaacaaggacaggaggaagtccctgtctgagggccggggaact
ccaggggccaaagaagctcgcgagcgcagcgtgtctgaaagcacagaggcccattccaca
tctcaggggacagaccacaaaggagcagggcctagctggacttcccctcgatctgacggt
cacagaggatcaatgggcgggcagcttcatcggccccgcgccttttcccagagcgctgtg
cacactctggagaggagggaggaggagacagatctggaaagtgcgggtctgtttcagccc
cgcacccctgctcaccctcaacagccgagcgaggatgtgaccagtgatgaagagcatatg
gtgatctgtgaagagggggatgatgatgtcatagaagactcgtttgcagacggctccatt
gacctgaagtgtaaagagagagtgacagacagcgatgatgaaaacgaccatgcagatgag
gctgacagcaagcgcaccttccaaccagtagtccgttcctctttggcgctctctctggct
ggcacaactggcaacaaagataaagaagggcgtgaagagaacctggagaagaaaaagaga
gggatgggtggtgcagagctaaataatggggggcccaaaggaggaggtggaggagggcat
gttccgttccatattaactcagcctccgtcagtagtataaaaaccactttgctgcatgat
gcggggacgtactattcacacggcactgcaaggatggcccccaccatagtgaccaatgtt
gttcgacccatcactagcacccctatccccatcgccagcaagccagttgatgggacccta
cctccagacgggaagcccaagctactgataggtgccggtggagcaggaggaggtgggtac
ttttcctcctcttctcccaaacctaatgggcaaggaggcttagttactggcctagtcttg
ggaggagccttcccaaaccagcccactgttcagctcatcaccccacctcatcctactcca
tgcaacggagcccctagtaacagtgcaggaccccttcccctacttcatcaccagttcctc
cccactgcctctattacaccctctagtggcgggaaacctgtaacacaggtgcagtacatc
cttccaactctgcctgcaactgccaatcccaacagtccctcctcccagcagacctccagc
gtccttgccctgcctagtgccacacccacccatgtgaccctggccaatggtgtacattcg
ggggcgggacaagggataagatatgcttcagtcccagcagtgggaggagtcagcccagga
ggtggagttcaagcgcagtccccagtcttgcagagcaagatgcttgttcccatggcaact
gtcggaacaggatctacacctccacagccaatttccctggtgggcccaccccttcctgtt
caaaatggggctcaaccaggaagtaagatcattcaaattgcaccaatgcctgtggtccaa
acaaatgtgcatcctggtggatcagtgcataccggcagctcatttcctgtctctatgcca
accgcgactgtcatggctccagggcccaccccttctcagacggtgctcttgacgccacca
cctacaaggatcacatatgtccagtccactcctggagttgcgactcctttgccattgggt
tctacacctgcagtctcttccacccagcagaccccgtcacctgtgggtccatctccagtg
gcgactcttggcttcactgcaattgccccagctggtcaggccttggttcagcctattgtt
gcaagtcagccacccctcctggctcagtgcccacccccgagcggattgtcacaacctgca
caagcctcgacagccacccgtcaacttgtgaccgccatttaccccagcttagccggagga
gttgtgtcagtgacagccgtgccacaaagcacaccaagttccacatcagttccggcatca
tcctcaacgcctcaagcgaagacctcctcagccgtggctgcgcaaccacacacgcagaca
gatgcgcagctgcagtctcaggtaaacatgcaaatggaaaacgaaagaggagcagaatct
aggaaagagatggagaaacagagagacctggtggtgtcaaaggatggacatcaggcgcca
cctagtggtttggaggaatcggtgcaacccatctgtacatcacacaaacataaaggtcag
cattgcgaagggaaggaggacggaaagaaagggagcaaaatggagcgagagtatgcgaga
gatgtgggagggggcctgtctcaaacagagagagttgaaacagcaagagcaatggacggg
gagacggagactcaagctgagaccaacaacaaagacgagagtcgagaatcagggcgcagg
gaatcttctgttttggaccccccgccaccgcctttgcagactgacactccttcagctaaa
aaggccaagttccgcccacctccactgaaaagcactgctgatgctggtgacaagacgctg
tttggctccacttttgaagagcgtcttaaagagctgccggagttcaagcctgaagaggtg
ctgccctctcccaatctacagagtctagcaacttcccctagagccatactgggcagctac
cgcaagaagaggaggaactctacagatctagactcggccgacgaccccagttcaccaagg
aggaagagtcgtcgcctgtccagctgcagctcagagcccaacacacccaagagtgctgcc
aagtgtgaaggggacatcttcaccttcgatagggctgttggagagacggagcatattttg
gaggagttggaccgcgtgccgccctcctctctgcgtcggatgctggaccagcggcgtgca
ctcgtcatgcaactcttccaggagcacggcttcttcccctcagcgcaagccacagctgcc
ttccaagctcgctactctgacacgtttcccaacaagctgtgcctgcagctgaagattcgc
gaggtaaggcagaagatcatgcagaccgccggcagttctgaaattgtgggaggcgtggct
cttgccggctctgacttcgcctctacatctggaccatccaatccagcgcccagggagaat
tccgagccagaagagaggaccagggccacggaagagccaaagaaagacgcgggcgatccg
caggaatcgagatga
DBGET
integrated database retrieval system
