Rhinichthys klamathensis goyatoka (western speckled dace): 130076829
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Entry
130076829 CDS
T09701
Symbol
stxbp5l
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130076829 (stxbp5l)
Membrane trafficking [BR:
rkg04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130076829 (stxbp5l)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
130076829 (stxbp5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR19_1st
Lgl_C
Beta-prop_DCAF4
Beta-prop_VPS8
Synaptobrevin
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
130076829
NCBI-ProteinID:
XP_056098057
LinkDB
All DBs
Position
Unknown
AA seq
1267 aa
AA seq
DB search
MKKFRKVLDGLTTSSPVNPGGSPACGSAAGTPSAAPTPRELEIQETLMSEHFQICKTVRH
GFPYQPTALAFDPVQKILAIGTRSGGVRLLGRPGVDCHCQHESGAAVLQLQFLINEGALV
TACADDTLHLWNLRQRRPAILHSLKFNRERITFCHLPFQSKWLYVGTERGNTHIVNIESF
VLSGYVIMWNKAIELSTKTHPGPVVHLSDSPKDEGKLLIGFESGTIVMWDLRVKRADFRI
YYDEAIHSVSWHHEGRQFMCSHSDGSLSMWNLRNTAKPFQVTFPHGKTQRDGRKESCKPI
LKVEYKTSRNSSEAFVIFSGGLSYDKAGRRPTLTIMHGKAITVLEMDYPIVDFMVLCDTP
YLNEVQEPYAVVVLLEKDFVVVDLTQSNFPIFENPYPMDVHESPVTCTAYFADCPPDIIP
VLYSIGAKHKKTGYSHKEWPVSGGTWTVGSQTYPEIIVTGHADGSIKFWDATAITLQMLY
KLKTSKVFENPKSGDVGRSGELVEEDPYAVQMISWCPQSRIFCVVGISAHVILYRFSKHD
ANTTITSLEVRLQCEMEDVISPSDTENTPCYSDPSGLSPQPQPPSPRSNTPDSARDSIPC
LKVKDRMIRMPPGYQAELVVQLLWIDGEPPQQITSLDLNSAYGLLAVGNCNGLAVVDYLQ
KTILLCMNTLELYGSADPFQRLTRSPRKNRQSTSDFCMRGLSNFYSDSKKRIRTSYQSLT
ELSDNQVSLDLERSKSPTSAPYSPSLHNDPRGTGEPVSNLRSCHYSPVFYLLDNVKGPGR
KLSLPTDLKTDLDHVNGHCTSPTSQPCPSGRARVPGGPEGPRLARRGPGRPPFRKAQSAA
CMEVSLPVSSLTEGHSSRRAMLQQLHGVSMYSHDEHHITTYSWSERESRENSFSRSRSSS
VSSIDRETKEAVTTLQFMESYGRKSDPLPTPCLWVGTSLGLVLIIPMSIPMDEQERQEDP
VTVVPTGTVLMLKGSILRFSFLDFGGALIHSPYEVWRDQQAPGDPDRPRKRKLVNFSPSS
SQEASGDCHLAVVCSEKQAKVFLMPTQACLYVHNITESSFVLRADVVSVCNSVCLACFCA
NGHIMTLSLPSLRPLLDVNYLPLTDMRIARTFCFTNGGQALYLCSPTEIQRITYSQEMCD
NLQEMLGELFTPIETPEAQNRGFLKGFFGGNAQTFDREELFGEASAGKGSRSLAQHIPGQ
GGMEGMKAAAGGVVGELARARIALDERGQRLGELEERTALMMSSAETFSKHAHEMMLKCK
DKKWYQF
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttccggaaggttttggacgggttgaccacttcatcgcctgtgaatccaggc
ggatctcccgcgtgcggcagtgcggctgggacccccagtgcggcaccaacaccgcgcgaa
ctggagatccaggaaacgctgatgtccgagcacttccagatctgtaagacggtgcgtcat
ggatttccctatcagcccacagctctggcatttgacccggtgcagaagatccttgccatc
ggcactcgttccggaggagtacgtcttctgggaaggccgggagtggactgtcattgtcag
catgagagtggggcggcagttctccaactgcagtttctcatcaatgagggggcgctggtc
acagcctgtgcggacgacacgctgcatctctggaacttacgacagcgacgtccggctatc
ctacactctctcaaattcaacagagagcggatcacattttgtcatcttccgtttcaaagt
aaatggctttatgtggggacagagcgtggaaatacacacatagtgaacatcgaatccttc
gttttgtctggatatgtcatcatgtggaacaaggccatagaactatcaacgaagacacat
ccaggtcctgttgttcacctgagtgacagtccaaaagatgagggaaagttgctgataggt
tttgagagcggtacaatagtaatgtgggacctgagggtcaaaagagctgacttcaggata
tactatgatgaggccattcactcagtaagctggcatcacgaggggcggcagttcatgtgc
agtcattcggacggcagtctgagcatgtggaatttgagaaacacagccaaaccttttcaa
gtcaccttccctcatggcaagactcagagagacggtagaaaagagtcatgtaaacccatt
ctcaaggtcgaatacaagacctccagaaacagtagtgaagcctttgtaatcttttccgga
ggactttcgtatgataaggcaggacggagacccaccttaaccatcatgcatggcaaagcc
atcacagtgttagagatggactatccaatagtggacttcatggtgctctgtgacactccc
tatctcaacgaggtccaggagccatatgcggtggtggttctgctggagaaagatttcgtt
gtggtcgatttaacccagagcaattttcctatctttgagaacccataccccatggacgtc
catgagtctccagtcacgtgcactgcttactttgccgactgtccccccgacatcatacct
gtgctttactccataggagccaaacacaaaaagaccggctacagtcacaaggagtggccg
gtcagtggtggcacatggacggttggttcgcagacatatccagagattatcgttacagga
catgcagacggatcgataaagttttgggatgccacagcgatcacactgcagatgttgtat
aagctcaagacatcaaaggtatttgagaatcctaagagtggagacgtgggacgcagcggc
gagcttgttgaggaagacccctacgccgttcagatgatcagctggtgcccacagagccgt
atcttttgtgtagtcggcatcagtgcccacgtcatcctgtaccgcttcagcaaacatgac
gccaacaccaccatcacgtccttagaggtgcggctgcagtgtgagatggaggacgtcatc
tctccgtcggacacagagaacactccatgttattcagaccccagcggtctctcaccccaa
ccacaaccccccagtccccgcagcaacacgccggacagcgcgcgggacagcatcccttgc
ctcaaggttaaagatcgtatgatccgaatgcctcctggataccaggcggagctggtggtt
cagttattatggattgatggcgagccgccacaacaaatcaccagcctggatttaaactct
gcctatggactgttggctgtaggtaactgcaatggtttggcagttgtggactacctgcag
aaaaccattctgctgtgtatgaacaccctggagctgtacggatccgcagaccctttccag
cgactaacacgctctcctcgcaaaaaccggcagtccacatcagacttttgcatgcgcggc
ctgtctaacttttattccgattcaaagaaacggatccgtacttcctaccagagccttacg
gagctttctgataatcaggtgtctttggacctagagaggagcaagtcacccacctcagca
ccctactccccttccctccataatgaccctcgaggcacaggggaacctgtgtccaacctc
cggtcctgccactacagtcctgttttttacctgttggacaatgtcaagggaccaggcaga
aagttaagtctacccacagatcttaagactgatcttgatcatgtgaatggacattgcact
agccccacctcccagccctgtccatctgggagggccagagtcccggggggccctgaaggg
ccacgccttgcccgcagggggcccggccgaccgcccttccgcaaggcccagtccgccgca
tgcatggaggtctctttgcctgtgtcctccctcaccgaaggtcattcgtctcgacgagcc
atgctgcagcagttacacggagtcagtatgtactctcacgatgagcatcacatcaccacc
tactcctggagcgagagagagagtcgagaaaactcgttcagccgttcccggagctctagc
gtttccagcatagacagggagactaaagaggccgtaaccaccctgcagtttatggagtca
tacgggcgtaaatcagaccccctgcccacgccatgcctgtgggtgggcacaagtctgggc
ctggtgcttatcatcccaatgtccatccctatggatgagcaggaacgtcaggaagacccc
gttactgtggtccccactggcacagtgttaatgctgaaaggctccattctgcggtttagt
tttctggattttgggggcgctcttatccacagtccctacgaggtgtggcgggaccaacaa
gccccaggtgacccagatcgaccccgcaagcggaaactggtcaacttctcgccctcatct
tctcaagaggccagtggagactgtcacttagccgtggtgtgttcggagaagcaggcaaag
gtcttcctaatgcccacccaggcctgtttatatgtacacaacatcacagagtcatccttc
gtgctgcgggccgacgtggtgtcggtttgtaacagcgtttgtctggcctgcttctgtgcc
aacggacacatcatgactttgagccttcctagtttacggcctctgctagacgttaattac
ctgccgctaacggacatgcgtattgccagaacattctgcttcaccaacggaggacaggcg
ctgtatctgtgctcccccacagagatacagagaatcacttacagccaggagatgtgtgac
aacctacaggagatgttaggggagctctttacacccatcgagacccctgaggcacagaac
cgtggctttctcaagggcttttttggcggcaacgcccaaaccttcgaccgagaggagctg
tttggcgaggcatcagcgggtaaggggtcccgcagcctggcacagcacatccctggacag
ggtggaatggagggcatgaaggcagcagcgggcggggtggtgggggaactggcccgagct
cgtatcgccctggacgagagaggacagaggctgggggagctggaggagaggaccgctctg
atgatgagcagcgccgaaaccttctctaaacacgctcacgagatgatgctgaaatgcaaa
gacaagaagtggtatcagttttag
DBGET
integrated database retrieval system
