Rhinichthys klamathensis goyatoka (western speckled dace): 130076876
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Entry
130076876 CDS
T09701
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130076876
Membrane trafficking [BR:
rkg04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
130076876
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
LRR_LRWD1
Ig_2
LRR_9
LRRNT
V-set
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
130076876
NCBI-ProteinID:
XP_056098134
LinkDB
All DBs
Position
Unknown
AA seq
606 aa
AA seq
DB search
MASSWGRGRLWCLGLILALASPNPCSGCPPRCDCAPQLRSVSCQRKRLSGVPEGIPTETR
LLDLSRNRLRWVAPGDLAPYPRLEDVDLSENLITTLEPNAFASLQALRSLRLRGNQLKLV
PMGAFARLANLTTLDLSENKIVILLDYTFQDLRSLKHLEVGDNDLVYISHKAFSGLIGLE
DLTIERCNLTSISGQTLSYLRNLVTLRLRHLSISALEDQNFRKLSALRGLEIDNWPYLEY
ISPLSFQGLNLSWLFITNTNITSVPSASFRNLAYLTSLNLSYNPISVLESWAFRDLIRLK
ELHMISTNLLTVEPHALGGLRQIRVLNLSNNELVTLEESSFHSVNSLETLRVDGNPLSCD
CRLLWILQRRRTLNFDGKMPVCAGPPEVQGFMLSTFTDSALFDYFTCQKPKIRNRKLQQV
TANEGQPVSFQCRAEGEPVPAIIWISPQRRRITPKSNGRITVLPGGTLEIRYAQVTDSGT
YICIASNAGGNDTYFATLTVKSQPADSAFVSNRSLYAADFNDTGLNSTRVFLKFTLDLTT
ILVSTAMGCITFLGVVLFCFLLLFVWSRGRGQRKNNFTVEYSFRKTEGPATTAGAGATRK
FNMKMI
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcatggggccggggccggctgtggtgtctgggtctgattctggccctcgcg
tcccctaacccctgctcgggttgcccacctcgctgtgactgcgcgcctcagctccgctcc
gtgtcctgccagcgcaagcgcttatccggcgttcccgagggcatcccgacagagaccagg
ctcctggacttaagccggaaccggttgcgctgggtcgcgccgggagatctggctccgtat
ccgcgtctggaagatgtggatctcagcgagaatctcatcacgacgctggagcccaacgcc
ttcgctagccttcaggccctgcgctcgctgagactccggggaaaccagctgaagctcgtg
cccatgggagcgttcgcacgactcgctaacctcaccacactggacctgagtgagaacaag
atcgtcatcctgctggactacaccttccaggatctgcgcagtctcaaacatttagaggtg
ggggacaatgacctggtctacatctctcacaaggctttctcaggactgataggcctggaa
gatctgaccatcgagaggtgcaacctgacgtccatatcgggccagactctgtcgtatctg
cgaaacctggtgaccctccgcctgcgccacctcagcatctccgctctcgaggaccagaac
ttccgcaagctttccgcactgagaggactggagatcgacaactggccctacctggagtac
atctctccgctgagcttccagggtctcaatctctcctggctcttcatcaccaacaccaac
atcacctccgtcccgtcagcgtccttccgaaacctggcctacctgacgtctctgaacctg
tcctacaaccccatctccgtgctcgagtcctgggccttcagagacctcatcaggctgaag
gaactgcacatgatcagcacaaacctgctgaccgtcgagccgcacgctttaggaggctta
cggcaaatccgagtcctgaatctgtccaacaacgagctggtgactctggaggagagttcg
ttccactcggtgaacagtctcgagacgctccgagtggacgggaacccgctgtcctgcgac
tgccgcttgctgtggatccttcagcgccgacgaaccctgaacttcgacgggaagatgccg
gtgtgcgccggacctccagaagtccaggggttcatgttgagcaccttcacggattcggcg
ttattcgattacttcacctgtcagaagccgaagattcgaaaccgtaagttgcaacaggtc
acggcaaacgaaggccaaccggtttcgtttcagtgccgtgccgaaggcgaaccggttccg
gcgattatatggatctcgcctcagcgaagacgaatcactccgaagtcaaacgggaggatt
acggttctcccgggcgggacgcttgagattcgctacgcacaagtgacggacagtggtacg
tatatctgcattgctagcaacgccggcggaaacgacacatacttcgcgacgctaaccgtc
aaaagccaaccggcggattcggcgttcgtctccaatcgttcgctgtacgcggcggatttc
aacgacaccgggctcaacagcacgcgtgttttcctgaagttcacgctggacttgaccacc
atcctcgtgtccacggccatggggtgcatcacgttcctgggcgtcgtgctcttctgcttc
ctcctgctgttcgtgtggagtcggggacgcggacaacgcaaaaataacttcaccgtggag
tattcgttcaggaagaccgaagggccggccaccaccgcgggagccggagccacgcgcaag
ttcaacatgaagatgatatga
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