Rhinichthys klamathensis goyatoka (western speckled dace): 130077160
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Entry
130077160 CDS
T09701
Symbol
ush1gb
Name
(RefSeq) pre-mRNA splicing regulator USH1G
KO
K21878
Usher syndrome type-1G protein
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
130077160 (ush1gb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rkg03037
]
130077160 (ush1gb)
Cilium and associated proteins [BR:
rkg03037
]
Primary cilia and associated proteins
USH complex and associated proteins
130077160 (ush1gb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_3
Ank_5
SAM_1
HEAT_Spiral_Tel1
Motif
Other DBs
NCBI-GeneID:
130077160
NCBI-ProteinID:
XP_056098280
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MNDKYHRAARDGHLHLLRDATRKDLNAPDEDGMTPTLWAAHHGNLDALRLLVARGGDPDK
CDIWGNTPLHLAAANGHLNCLSFLVSFGTNVWCLDNDYHTPLDMAASRGHMDCVRYLDSI
AAKQIAINPKLVSKLKDRGFRNAEKRIMNCEKLQRKHHERMEKHFLRESAAMDMSDTMSY
SSFSSTLSRRIPQFNTLDSNMTYSQATLQSTTRGRTKILRRLEKKKQGDGTFKISEDGRR
SVRSISGLQLGNDVMFMKQGTYVSPRQQSNPRLNIRNMFSGEQDIREDEDDDEVDTVSHA
LSDPGLFDAAYSEISTDSGRDSLFNRPGLGTMVFRRNYVSDGLFRMGRNEGSVVGSEPVG
RVPNVRLRGRLPLRSPSLDDVSIGSSLSLQERNLQDLPWEEGDLGLEEEDDELQPSSAPL
EVFLASQGLSDFLSIFNREQLDLEALLLCSEQDLISIHIPLGPRKKLLDACKRRNNVINR
ADGMQDTML
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaacgataaataccaccgggcggctcgagacgggcacctgcacctgctgagagacgcg
acgcgcaaagacctgaacgcgccggatgaggatgggatgacgccgacgctctgggccgcg
caccacggcaacctggacgcgctcagactgctggtggcacgaggtggagatccagacaaa
tgtgatatttggggaaacactccccttcacctggcggcagctaacggccatctgaactgt
ctgtcctttctggtgtcatttggcaccaacgtgtggtgtttggacaatgactaccacacg
ccactggacatggcagcttctaggggtcacatggactgtgttcgatatctggactctatc
gccgccaaacagatcgccatcaaccccaagctggtgagcaaattgaaggaccgtggcttc
cgtaatgcagagaaacgcataatgaactgtgaaaagcttcagcgcaaacatcacgaacgc
atggagaagcatttcttgagagagagcgctgcgatggacatgtcggatacgatgagttac
agcagtttcagcagcaccttaagccgaaggatccctcagttcaacaccctcgactccaac
atgacgtactcacaggcaacgcttcagtccacaactagaggccggaccaagattctgcgg
cgtcttgagaagaagaagcaaggtgatgggacgttcaagatttccgaagacggtcgaagg
agtgttcgctcgatctctggtcttcagctgggtaatgacgtcatgttcatgaagcagggt
acatacgtcagcccacgccagcagtccaatcctcgactcaacatccgtaacatgttttct
ggtgaacaggacataagggaagatgaagatgatgatgaggtagacactgtttcccacgca
ctcagtgatccgggtctatttgatgctgcatactccgaaataagtacggattccggtcgg
gattctttgttcaaccgcccaggactcggtaccatggtattccgtcgcaattacgtgtct
gatgggctgtttcgaatgggacggaatgagggtagcgtggtggggagtgaaccagtggga
cgagtcccgaacgtccgcttacgagggagattgcccctacggtcacccagtcttgatgac
gtcagcataggcagctcattgagcctccaagagaggaatttacaggatttgccatgggag
gaaggagacctcggtttggaggaggaggatgacgagctacagccatcatcggctcctttg
gaagtgttcctggcatctcagggactgagtgacttcttgtccatcttcaatcgagagcag
ttggacctggaggcgctgctgttgtgctctgagcaggacctcattagcattcacatccca
ctcggaccccgcaaaaaactattggatgcgtgcaagagacgcaacaatgttatcaacaga
gctgacggcatgcaagacactatgctgtaa
DBGET
integrated database retrieval system
