Rhinichthys klamathensis goyatoka (western speckled dace): 130077177
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Entry
130077177 CDS
T09701
Symbol
vclb
Name
(RefSeq) vinculin b
KO
K05700
vinculin
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04510
Focal adhesion
rkg04520
Adherens junction
rkg04810
Regulation of actin cytoskeleton
rkg04820
Cytoskeleton in muscle cells
rkg05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130077177 (vclb)
04520 Adherens junction
130077177 (vclb)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130077177 (vclb)
04810 Regulation of actin cytoskeleton
130077177 (vclb)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
130077177 (vclb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rkg04812
]
130077177 (vclb)
04147 Exosome [BR:
rkg04147
]
130077177 (vclb)
Cytoskeleton proteins [BR:
rkg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
130077177 (vclb)
Exosome [BR:
rkg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130077177 (vclb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Mob_Pre
Motif
Other DBs
NCBI-GeneID:
130077177
NCBI-ProteinID:
XP_056098293
LinkDB
All DBs
Position
Unknown
AA seq
1066 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDAIMRRDMPPAFIKVENACTKLVQAAQMLKADPYSVQARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVESMEDLITYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISGIKIFVTTRTSQGKGVEEALKNRNFTVEKMSTE
IHEIIRVLQLTSWDEDAWANKDTEAMKRALALIDSKMAQAKNWLRDPHAQPGDPGEQAIR
QILDEAGKVGELCAGKERRDIMGTAKTLGQFTEQVSDLRARGQGASPVAMQKAQQVSQGL
DVLTGKVENAARKLEAMTGSKQAIAKRIDAAQNWLADPHAGPEGEENIRALLGEARKIAD
LCDDPKERDDILRNMSEISALTAKLSELKKAGKGDSPEARALAKQIATALQNLQSKTSKA
VANTRPAKAAVHLEGKIEQAQRWIDNPTLDDSGVGQAAIRGLVAEGRRLANALPASHRHE
LLGKCEEVEHLMGQLAELAARGEGDGPQARAIAHQLQDTLKDLKGKMQEAMTQEVSDIFS
DTTTPVKLLAVAATAPPNTPNREEVFEERAANFENHAGRLGATAEKAAAVGTANRSTVEG
IQAAVKSARDLTPQVISAARILLKNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTR
SLLDASEDAIKKDLDKCQVAMANHQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
ETVKAASDELSRTISPMVMDAKAVAGNIQDQGLQRGFLDSGYKILSAVAKVRESFQPQEP
DFPPPPPDLEQLQISDTAAPPKPPLPEGEVPPPRPPPPEEKDEEFPETQAGEVISEPMMV
AARQLHDEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGSGGNKRALIQCAKDIAKASDE
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgccggtttttcacacgaagacgatagagagtatcctggagccggtggcccagcagatt
tcccatctggtcatcatgcatgaggagggagaggtggacgggaaagccatcccggatctc
accgctcctgtggccgcagtgcaggcagctgtcagcaacctggtccgggtgggcaaagag
acggttcagaccactgaagatgccatcatgaggagagacatgccacctgcctttatcaag
gttgagaacgcgtgcactaaactggttcaggccgctcagatgttgaaggccgatccgtat
tctgtccaagcccgggattatctgatcgacggctcccgcgggatcctctccggaacctcg
gatctgctcctgaccttcgacgaggccgaggtccgtaagatcatccgtgtgtgtaaaggg
attctggagtatctgacggtcgctgaggtggtggagtcgatggaagacctgatcacttac
accaagaacctgggaccaggcatgacgaagatggccaagatgattgacgagcgacagcag
gagttaactcatcaggagcacagagtcatgctggtcaactccatgaacaccgtgaaggag
ctgctgcccgtcctgatctcaggcattaagatcttcgtgacgaccaggacgtcccagggg
aagggtgtggaagaggctctgaagaacaggaacttcaccgtggagaagatgagcaccgag
atccacgagatcatccgcgtgctgcagctcacgtcctgggacgaggacgcctgggccaat
aaggacaccgaggccatgaagagagcgctggctctgatcgactctaaaatggcccaggcg
aagaactggctccgggaccctcacgcccagccaggagacccgggcgaacaggccattcgg
cagatcctggacgaggcggggaaagttggcgaactctgcgctgggaaagagagacgagac
attatgggaactgccaagacgcttggacagtttacggagcaggtgtccgatctgagggcc
aggggtcagggagcgagtccagtggccatgcagaaagcacagcaggtttctcagggtttg
gatgttctcacggggaaagtggaaaacgcggcgcgtaaattggaggccatgaccggctcg
aaacaagccatcgccaagagaatcgacgccgctcagaactggctggcggatcctcacgcg
ggtcccgaaggagaggagaacatcagggctcttctgggagaagcgaggaagatcgcggat
ctctgcgatgatcccaaggagcgcgacgatatcctgcgcaacatgagcgagatctccgcg
ctcaccgccaaactctcagagctcaagaaagcaggtaagggtgattcccctgaggctcga
gcgctggccaaacagatcgccacagctctgcagaatctacagtccaaaaccagcaaagcc
gtggccaacactcgcccggccaaagcagcggttcacctggagggcaagatcgagcaggct
cagagatggatcgacaaccccacgctggacgacagcggagtcggtcaggctgctattcgt
gggctggttgctgaggggcgtcgcctggccaatgcgttgccggcgtcccacaggcatgag
ctcttgggtaaatgtgaggaggtggagcatctgatgggtcagttagccgagctagcggcc
cgcggggagggagacggtccacaggcccgcgccatcgctcaccagctgcaggacactctc
aaagatctgaagggtaaaatgcaggaagccatgactcaagaagtgtctgacatcttcagc
gacacgacaacacctgtcaaactattggctgtggcagcgacggccccgccaaacacaccc
aacagagaagaggtgtttgaggagcgggccgctaacttcgagaatcacgcgggccgtctg
ggcgccaccgcggagaaagccgccgccgtcggcaccgctaacaggagcacggtggagggg
atccaggccgccgtcaaatcagcgcgagacctcacgccacaggtcatctccgcagctcga
atcctcctgaagaaccctgggaaccaggcggcttacgagcacttcgagaccatgaagaat
cagtggatcgacaatgtcgagaaaatgacagggctggtggatgaagcgatcgacaccagg
tctctgttggatgcatcagaagacgccattaagaaagatctggacaagtgtcaggtagca
atggccaatcaccagcctcagatgctggtcgccggggcaaccagcatcgcccgacgagcc
aatcggatcctgctggtggcaaaacgagaggtggagaactcagaggacccgaagttcaga
gaaactgtgaaagcggcttccgacgagctcagcagaaccatctcaccaatggtcatggac
gccaaagccgtggccggcaacatacaggaccaaggccttcagaggggcttcctggactcg
ggttataagatcctgagtgccgtggctaaagtgagagagtcgttccagcctcaggagcca
gacttccctcctccacctccagacctggagcagctgcagatcagcgacaccgcggctcct
ccaaaaccgcccctgccggagggtgaagtgcctccgcccagacctccaccccccgaggag
aaggacgaggagttcccggagacgcaggccggagaagtgatcagcgagcccatgatggtg
gcggcccggcagctgcacgacgaggcccgcaagtggtccagcaagggtaatgacatcatc
ggcgccgccaagcgcatggctctgctgatggccgagatgtctcgactggtccgaggaagc
ggcgggaataagagggcgctcatccagtgtgccaaagacatcgccaaagcctccgacgag
gtcacgcgcctcgccaaagaggtcgccaagcagtgcaccgacaaacgcatacgaacaaac
ctgctgcaggtgtgtgagaggattcctaccatcagcacacagctgaagatcctctccact
gtgaaggccaccatgctgggacgcaccaacatcagcgaggaggaatcagagcaggccacg
gagatgctggtccataacgcccagaacctgatgcagtcggtgaaggagacggtgagagaa
gccgaggccgcgtccatcaagatccgcacagacgccggcttcaccctgcgctgggtccgc
aagacaccctggtaccagtga
DBGET
integrated database retrieval system
