Rhinichthys klamathensis goyatoka (western speckled dace): 130077189
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Entry
130077189 CDS
T09701
Symbol
dennd4c
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130077189 (dennd4c)
Membrane trafficking [BR:
rkg04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
130077189 (dennd4c)
BRITE hierarchy
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
DUF2464
PPR_long
PPR_3
PPR
Motif
Other DBs
NCBI-GeneID:
130077189
NCBI-ProteinID:
XP_056098308
LinkDB
All DBs
Position
Unknown
AA seq
1945 aa
AA seq
DB search
MIEDKGHRVTDYFVVAGLTDKSTPLEQDLSETKSSGPKASITDLAVINKSAGETVPEGFT
CIESTYSGQPANLNHGSLKSPELFLCYKRGHGKPPLIDVGVLYEGKERVIQGCEVIEATP
FGRCANVNNSSATSQRIFITYRRAHPVQPQNSLAVTDICVIITNKGETPPHTFCKVNKNL
NCGMWGSSVFLCYKKSVSASNSIPYKAGLIFRYPEEDYESFPLSESVPLFCLPMGANIEC
WAPSTRYPLPIFSTFVLTNSNGEKVYGAGIQFYEPYPVDGLSEKQKIQLGLVSTVEKKVI
PNRTVNTNKCICLLSRWPFFESFKKFLMFLYKLSANGVNPLPIEKHISHFMHNVSFPSPQ
RPRILVQLSAHDTLILSQPVCTPLPLSGADYGTLLMNLGPENCATLLHFVLLESKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPCPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYLFDEKKHSNWKNLPKKPCKSLINSLGNLHQQLATVRREALEGLAVEM
TPIEADFTWHKKKTELEMEIQEVFLRFMASILKGYRTYLKPITQAPSDKATAADSLYDLQ
GFLKSRDRAHQKFYSQLTKTQIFIRFIEECTFVSDKDTGLAFFDDCIGKLFPSDKGPDKG
TKVEGEASEDTRLMELDESQKSEHTVFVMPPEPPLDDGPDPPPKYSYQNFPCLRLELFDR
PRELRPALSTRTAGASVSSSPALLAKRTKQEIKLAYKLAKRFYSNPPQWAKCLFSHCYSL
WFICLPASMRTAQSKPRAMQQAFNVLLKMRSSEVEVLDEVCYRVVMQLCGLWGMPVMAVR
VLMEMKKAGVEPNAITYGYYNKAVLESHWPSRNRSGLFMWTKMRNLVRGVVQFKHALRGT
ALHRGPSLITTELSAGTAAGANGDRLSHGSVDSSNEPIVEEHILFSHGLIVEGAINSHYS
TAGQSDQGYGSKDELPQDLADGPITSAPLSSSHTSNSKATNSQIGDDIASSVDSVVAVTQ
PPSPAEMAPCVASIVKLSTEIPVHFDSTAGRGETGVCTGKLFMPRKKSEDVTLPVEDDSA
IPDSQVSQSGQQQRVKAFMERSCSFSAESKAGMLQKKGSLELSADHMGADAKILAAVFSG
SLTPPPFGTIAPFKDFKMEATLSPALQEEEHEDKPEEEHKAFSTAEEKVEKSRELEDSVD
TATPQGSEGLGRTISTGSSSSKAVEREDVEVGADPLSLFASETEDVTSIQSQESTQPFPL
LVSRNLADEIEMYMSGKPLSGRSPSMELQHGSNHESINCPDSPAVKQSLERRSSLPIGPV
KVASSTETPKRSPAVTRSKTFAFKSPKTPGSAGQRSSSLTALVKSSQSSSLGSVINSISG
IKMDTLLVGPKVDMLKSGMKQAANVASKMWDAVASAYSYSDDEEDNSHPRDSFPARLEEQ
LLSAEGATENTLPRGLMPSLASNGLTHSNTSLGSSSDSSDTGRAKLSTPLTPGRSMRGAD
SERSEHSSSHHASTSSIYQNCALEVLMSSCSQCRSCEALVYDEEIMVGWTADDSNLNCTC
PFCQISFLPLLHVEFHDLRATPGFYLTSTSGDSIHSSSTQPATSSSSEVKGCPSEPSDLV
SFPESPENSKGPVEMPGGQSGTPKIFVPEPVHSDPLGLIERQAEKRNTLTRSNSVGGPLQ
SLDLIQKPNHGISTTSLPNSLQEVADTFGQKWPNPKPVSVPYLSPLVLRKELESLLENEG
DQVIYTHKFLSQHPIIFWNLVWYFRRLDLPSILPGLILTSEHCNNGVQLPQTSLSQDSKQ
VYVQLLWDNVNLHQDPTEPLYQLWRTFLQRKGTLSPTDHQETRTLLNSIVRSIQTNDVYG
PINMLLREIKKHPEVKRQRSIYREIVFLSLVALGKENIDIEAFNREYRLAYNELSAEQLK
VLSPIDRPPSNGVQWCLKCFGAPFI
NT seq
5838 nt
NT seq
+upstream
nt +downstream
nt
atgattgaggataagggtcaccgcgtgacggactacttcgttgtagctggcctcacagac
aagtccacaccactagagcaggatttatctgaaaccaagtccagtggacccaaggcatct
atcacagacctggctgtcatcaacaagtctgcaggagaaactgtgcctgaaggtttcaca
tgcattgagagcacctacagcggccagccggccaatctcaaccatggcagcctcaagagc
ccagaactcttcttgtgttacaagaggggtcatggaaagcccccactcattgacgttggg
gtcctgtacgagggtaaagagcgtgtcattcagggttgtgaagtcattgaggccacaccg
tttggccgctgtgcaaacgttaacaacagctctgccacatctcagcgcatattcatcaca
tatcgccgagcgcaccccgtccagccgcagaactcactggctgtgactgacatctgcgtc
atcatcacaaacaagggcgagactcctcctcatactttctgcaaggtgaacaagaacctc
aactgtggcatgtggggatcgagtgtgtttttgtgctacaagaagtcagtttccgcctcc
aactccatcccttataaggctggtctgatctttcgttatcctgaggaggactatgagtca
tttcccctctctgagtctgtacccctcttttgcctgcctatgggggccaatattgagtgc
tgggctcctagcacacgctaccctttacccatcttctccacatttgtcctcaccaactcc
aatggggaaaaggtgtatggagctggaatacagttctatgagccgtatcctgtggacggc
ctcagtgagaaacagaagatccagctgggtctggtctccactgtagaaaaaaaggtcata
cccaaccgtactgtcaacaccaacaagtgcatctgcctactgtcccgctggcctttcttt
gagtccttcaagaaattcctcatgttcctttacaagctgtcagccaatggagtcaaccca
ctgcccattgagaaacacatatcccacttcatgcacaatgtctctttcccttcaccccag
aggccaagaatactggtccagctgtcagcacatgacaccttaatcctgtcccaacctgtt
tgtacacctttaccattaagtggagcagactacggtacactgctcatgaatctgggccca
gaaaactgtgccacactgctacactttgtcctgctggaaagtaagatcctgttgcactct
ctgagaccagctgtactgactggagtggctgaggccgttgtggcgatgatcttcccattc
cagtggcagtgtccgtatatccctctttgccctctgtctctggcgggggtcctcaacgca
ccatgtcccttcattgtgggtgttgactctagatactttgacctctacgatcccccaccc
gacgtggtctgtgtggacttggataccaacactatatacttgtttgatgaaaaaaaacac
agtaactggaagaatctcccaaagaagccctgcaaaagtcttatcaactctctaggaaac
ctgcaccagcagcttgccactgttcggcgtgaagcacttgaaggcttggcagtggagatg
acccctatcgaggcagacttcacctggcataaaaaaaagacagagttagagatggagatc
caagaggtgttcctgcgctttatggcctccatactgaagggctaccgaacctacctcaaa
cccatcacacaggcaccttctgataaagctactgctgcagactcactctatgacctgcaa
ggattcttgaagagcagagatcgtgctcatcagaagttctactctcagctcaccaagact
cagatcttcatccgcttcatcgaggaatgtacttttgtcagcgacaaagacaccggcctg
gctttcttcgatgactgcattggaaaactttttccttccgacaaaggaccggacaagggt
acaaaggtcgaaggtgaggcgtctgaggacaccaggctgatggaactggatgagtcacag
aagagcgagcacacagtcttcgtcatgcctcctgaaccccctctggacgatggtcctgac
ccccctcccaaatacagttatcagaatttcccttgtttacggttggagttgtttgatcgt
ccgcgagagctgaggccagcgcttagtacaagaaccgcaggagccagtgtgtccagcagc
cctgccctgctggccaaaagaaccaaacaggaaatcaaattggcctacaagttggcaaag
cgtttctattccaatccaccccagtgggcaaagtgtctgtttagtcactgctacagtctg
tggttcatctgtcttcctgccagcatgcgtacagcccagtccaaaccccgcgccatgcag
caggccttcaatgttctgctcaagatgaggagctctgaggtggaggtgctcgatgaggtg
tgttaccgtgtggtgatgcagttgtgtggtctgtgggggatgcccgtcatggctgtgcgt
gtcttaatggagatgaaaaaggctggagttgaacccaatgctattacttatggatactac
aacaaggctgtcctggaaagtcattggccaagccgtaaccgtagcggactcttcatgtgg
accaaaatgcggaacctggtccgaggagtggtgcagtttaaacatgcattgcgtgggaca
gctcttcatagaggtccttctctgataaccacagagctttcagcaggtacagcagcaggt
gctaatggagacagactgagtcatggcagtgtagacagctcaaatgaacctattgtagag
gaacacatactcttctcccacggccttatagttgagggtgctattaacagtcactatagt
acagctggtcagtctgatcagggttatggatctaaggatgagctgccccaggaccttgca
gatggacctataacctctgctcctctgtcttccagccacaccagcaatagcaaagcaaca
aactcccaaattggggatgatattgctagttctgtggacagtgttgtagctgtgacccag
ccccctagccctgctgagatggcaccttgtgtagccagcattgttaaactgtccactgag
atccctgtccactttgacagcactgcaggcaggggagaaactggtgtttgtacaggtaag
ctcttcatgccccgtaaaaagagtgaagatgtcaccctgcctgtggaggatgattctgca
atcccagattcacaggtctctcagtctggacagcagcagagggtgaaagccttcatggag
cgcagctgcagtttcagtgcggagagcaaagccggcatgctacaaaagaagggcagtctg
gagctcagcgctgatcacatgggcgcggatgcaaaaatcctcgcagccgtgttctctggc
agtctgacccctcctccttttggaaccatcgctccttttaaagattttaagatggaggct
acactgagccctgccctccaggaagaggaacatgaagataagccggaggaggagcacaaa
gcattcagtactgcagaagagaaagtggagaaaagtagagagctggaagattcagtagac
acagcaacaccccagggtagtgaaggacttgggcgaaccattagcactggttcctcctct
tctaaagctgtggagagggaggatgttgaggtgggggcagatcctctgtcgctctttgcc
tccgaaactgaggatgtaacctccatccagagccaggagtccacacagccctttccactt
ttggtgtcaaggaatctggctgatgaaattgaaatgtacatgagtggtaaacctcttagt
ggtagatctcctagcatggagttgcaacacggatcaaatcacgaatcaattaactgtcca
gactctcctgcggttaagcagtctttagaaagaagatcaagccttccgattggtccggtc
aaagtggctagttcaactgaaacgccaaaacgtagccctgccgtcacacgctctaagaca
tttgcattcaagtcccccaagaccccaggctctgcaggtcaaaggtcatcatcgctgacc
gctcttgtaaagtcatcacagagcagctcactgggatctgttatcaactccatatcaggc
atcaagatggacactctcctggtagggccgaaagtagatatgcttaagtccggcatgaag
caggcagccaacgtggccagtaagatgtgggatgcagtggcctcagcttactcctactcc
gatgatgaggaggataactcccacccccgagacagtttcccggctaggctagaagagcag
ttgctatctgcagagggagcaacagagaacactttacccagaggcctgatgcccagcctg
gcctcaaatgggctcacgcacagcaataccagcctgggcagcagcagtgatagcagtgat
accggccgtgcaaagctgtcgacacctttgactccaggtcgctcaatgagaggtgcagac
tcggagaggtctgaacatagttcctctcatcatgccagcacctccagcatttaccagaat
tgtgctttagaggttctaatgtccagctgctctcaatgtcggtcttgtgaggctctggtg
tatgatgaggagatcatggtgggctggacggctgacgactccaatctcaactgcacctgt
cctttctgtcaaatctcttttctccctctgctccatgttgagttccatgacttgcgtgct
acaccaggcttctacttgacgagcacatcaggagacagtatccacagctccagcacgcaa
ccggccacctctagctcctctgaagtgaagggttgtcctagtgagccttcagacctcgtg
agtttcccagaatctccggagaacagcaaaggtcctgtcgagatgcctggcggtcaaagt
ggaaccccaaagatctttgtaccagaaccggtacattcagaccccctgggtctcatagag
agacaagctgagaaacgcaacactttaacccggagcaacagtgtgggaggcccactgcag
agtctggacttgatccaaaaacccaatcatggcatatccaccacaagcctgcccaacagt
ctacaagaggtggcggacacttttggtcaaaagtggcccaacccaaaaccggtgtctgtg
ccgtatctcagtccactggtcctgcgcaaagagttggagtcgctgttagagaatgagggg
gatcaggtaatctatacccataagttcctcagtcagcaccccattatcttctggaacctg
gtgtggtatttccggcgtttagacctgcccagcattctgcctggactcatcctcacctct
gaacactgcaacaatggagtacagctgccacagacatctctgtctcaggacagtaagcag
gtgtatgtgcagctgctgtgggacaatgtcaacttacatcaggatcccaccgagcccctc
tatcagctctggaggaccttcttgcaaagaaagggaactctaagccccactgaccaccag
gagactcgaactctactgaacagtattgttcgcagcattcagacgaacgatgtgtacggc
cccatcaacatgctccttagggagatcaagaaacacccagaagttaaacgccagaggagt
atctatagggaaattgtgtttctgtcacttgttgccttaggaaaggagaacattgatatt
gaagcctttaatcgtgaataccgtcttgcatacaatgagctcagcgcagaacagcttaaa
gtcctatcccccattgacagaccacctagcaacggtgtgcagtggtgcctcaagtgcttc
ggagccccgttcatctga
DBGET
integrated database retrieval system
