Rhinichthys klamathensis goyatoka (western speckled dace): 130077373
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Entry
130077373 CDS
T09701
Symbol
brpf1
Name
(RefSeq) peregrin
KO
K11348
bromodomain and PHD finger-containing protein 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rkg03036
]
130077373 (brpf1)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
MOZ/MORF complex
130077373 (brpf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H_2
EPL1
zf-HC5HC2H
Bromodomain
PWWP
PHD_2
PHD
PHD_NSD
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
130077373
NCBI-ProteinID:
XP_056098573
LinkDB
All DBs
Position
Unknown
AA seq
1261 aa
AA seq
DB search
MGLDFDVKTFCHNLRATKPPYECPVETCRKVYKSYSGIEYHLYHYDHENPPPPQASPQKK
RKGRPPRSSLPGCADGPDSSTGSGVTGPVPTPGSPTDRSDSPVRETMTYAEAQRMVELEI
RGRVHRISIFDNLDVVSEEDSGAEETPVLGTGPCNGGEAGGIGKDRLDGANGEKGTPKTG
KHKSKEKKKDSSHHHHVNPPVKLPEVVFRELDQDRPDAPPRPMSYYRYIDKSAEELDEEV
EYDIDEEDYIWLDIMNDRRRTDGVAPILQEVFEYLMDRLEKESYFESHNKGDPSSLIDED
AVCCICNDGECQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRRCLQSPSRAVDCALC
PNKGGAFKQTDDARWAHVVCALWIPEVCFANTVFLEPIDSIEHIPPARWKLTCYICKQRG
SGACIQCHKANCYTAFHVTCAQQAGLYMKMEPVRETGANGTSFSVRKTAYCDIHTPPGSA
RPLAGVGGASTGVGGASAGSSPSEGEAEEEEDEVGGEEDGKGWSSERAKRAKAKSRLKMK
RARKILAERRAAAPVVSVPCIPPNKLSKITSNLSVQRKSQFMQRLHSYWTLKRQSRNGVP
LLRRLQTHLQSQRNAEPLTPTRDGEEKHSVLKEQLKAWQRLRHDLERARLLVELIRKREK
LKRETLKVQELALEMQLTPFLVLLRSTLEQLQERDSSNFFTEPVPLSEVPDYLDHIERPM
DFQTMWKCVESHRYLSFEAFESDFLLIVNNCLKYNAKDTVFYRAALRLREAGGSVLRQAR
RHAERIGLDYETGLHLPREPSPDSPHERERDRERERDRERERSASLIDDDFLLEGRGRLP
LEEQLQILQDRYEEVMSGKHSIGQLRRAKALKKEMTVLKRKLAHQREGICGHESGLSLER
GSVLTHHSSGGARHDEGESSHDISGKDLSTSSSALAPEVGRRTSVLFSKKNPKASGPPKR
PGRPPKNRDLLHGSGLISSAIGPPQLPSLHPSRKRPHSPQSSSSSETDSEHDHLILGLHT
NGFGGSGQPKTESFLVYRNERSLPRSSSDSESTSSSSSSAASDRTSTTPSKQGRGKASFS
RSTFPDDSSEETSGTENDSYSMGGSRGVSHLVRSRGRSGCWMSSDDYSALDALDLVWAKC
RGYPSYPALIIDPKMPREGVFHRGVPIPVPPLEVLKLGEQMTQEAREHLFLVLFFDNKRT
WQWLPRSKLVPLGVNQDLDKEKMLEGRKSNIRKSVQVAYHRAMQHRNKVQGDPSSDTSDS
D
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgggactggacttcgacgtcaagacgttctgccacaacctgcgtgcgaccaaaccgccg
tacgagtgtccggtggaaacctgccgcaaggtctacaagagctacagcggcatcgagtac
cacctgtaccactatgaccacgagaacccgcctccgcctcaggccagccctcagaagaag
cgcaagggtcgccccccgcgctcctccctgcccggctgtgccgacgggcccgactccagc
accggctcaggggtcaccgggccggtgccgacgccgggaagcccgactgatcgctccgac
tcgcccgtcagagaaaccatgacctacgccgaagcccagcgcatggtggagctcgagatc
cgcggccgggtccaccggatcagcatcttcgataacctggatgtggtttcggaggaggac
agtggtgccgaggagactccggtgttgggaacgggcccgtgtaacgggggcgaggccggg
ggaatcgggaaggaccggttagacggggccaacggggagaaaggcactccgaagacgggg
aagcacaagagtaaggagaagaagaaggactcgtctcatcatcatcacgtgaacccgccc
gtcaagctgccggaggtggtgtttcgagagctggaccaggaccggcccgacgcgcccccc
cgacccatgtcttactacaggtacattgataagtccgccgaggagctggatgaggaggtg
gagtacgatatagacgaggaagactacatctggctggacatcatgaacgaccggcgccgc
actgatggggtcgcgcccatccttcaggaagtgttcgagtatctgatggaccggctggag
aaggagtcttactttgagagccacaacaagggcgaccccagctctctgatcgatgaggac
gccgtgtgctgcatctgcaacgacggcgagtgtcagaacagtaacgtgatcctgttctgt
gacatgtgtaacctggcggtgcaccaggagtgttacggcgtgccctacatccccgagggc
cagtggctgtgccggcgctgcctgcagtcgccctcgcgagccgtcgactgcgcgctctgc
cctaacaagggcggcgccttcaagcagaccgacgacgcgcgctgggctcatgtggtgtgt
gcgctctggatcccggaggtgtgttttgctaacacggtgttcctggagcccatcgacagc
atcgagcacatccctcccgcgcgctggaagctaacatgctacatctgcaaacagcgcggc
tccggcgcctgcatccagtgccacaaagcgaactgctacaccgccttccacgtgacctgc
gctcaacaggccggcctctacatgaagatggagcccgtgcgcgagaccggcgccaacggg
acgtcctttagcgtgcgcaagacggcgtactgtgacattcacacaccgccaggatcggcc
cggccgctggcaggcgtgggcggggccagcactggtgtgggcggggccagcgcaggctcc
tcccccagcgagggcgaggccgaggaagaggaggatgaggtgggcggagaggaagatggg
aagggatggagctcggagcgagcgaagagagctaaagctaaatcacgactgaagatgaag
agggccagaaagatcctggcggagaggagagcggccgcaccggtggtgtcggtgccgtgt
attcctccaaacaagctgagtaagatcaccagtaacctgtcggtgcagaggaagagtcag
ttcatgcagagactgcacagctactggacgctgaagagacagagtcgcaacggtgttcct
ctcctgcggcgtctgcagacacacctgcagtcccagcgcaacgccgagccgctcactccc
acgagggacggggaggagaagcactcggtgttgaaggagcagctgaaagcgtggcagagg
ctccggcacgacctggagcgagcgcgactgctggtggagctcatccgcaagagagagaag
ctcaagagagagacgctcaaggtgcaggagctggcgttagagatgcagttgaccccgttc
ctggtgttgttgcgcagcacgctagagcaactgcaggagagagactccagtaacttcttc
actgagcctgtgcctttgagtgaggtcccagattacctggaccacatcgagcgtccgatg
gatttccagaccatgtggaagtgtgtagagtcgcaccgctatctcagctttgaagctttc
gagtcggactttctgttgatcgtcaacaactgtttgaagtataacgccaaagacacggtc
ttctaccgcgcagcgctgcgactgcgagaagccggcggctccgtcctacggcaagcgcgc
agacatgcggagagaatcggcctggattacgagacgggccttcatcttcctcgagaaccg
agcccggattcaccacacgagcgagagcgagaccgagagagagaacgagaccgagagaga
gagagatcagcgtcactcattgatgacgatttcctgctggagggccgagggcgtctgcct
ctggaggagcagctgcagatcctgcaggaccggtacgaggaggtgatgtcgggcaagcac
agcatcggccagttgcggcgagccaaagccctgaagaaggagatgacggtcctgaagcgc
aagctggcgcaccagcgcgagggcatctgtgggcacgagtcgggcctgtctctggagcgc
gggtcggtcctcacgcatcactcctcaggaggagctcgtcacgatgaaggagagagcagc
cacgacatcagtggcaaagatctgagcacgtcgtcttcagctctggctcctgaggtcggc
cggcgcacatctgtcctcttctccaagaagaacccaaaagcctccggacctcccaagcgc
ccgggccgacccccgaagaaccgcgatctcctgcacgggtcggggttgatctccagtgcc
atcggccccccgcagcttccctcgctccacccgtcccgcaagagaccccacagtccccag
tccagctccagctcggagaccgacagcgagcacgaccacctcatcctgggtctgcacact
aatggcttcggtggaagcggccagccgaagacggagagctttctggtgtacaggaacgag
aggagtctcccgcgctccagctccgactctgagtccaccagcagcagcagcagcagcgcc
gcgtcagacaggaccagcaccactccctctaaacagggtcgagggaaggcctcgttctca
cgctccacgttcccggatgacagcagcgaggagacgtccggcacagagaacgactcctac
tccatgggaggatcccgaggagtgtctcacttggtgcgcagcaggggccgctcgggatgc
tggatgagctccgatgactacagcgctctggacgctctcgatctggtgtgggccaagtgc
agaggatacccatcataccccgctctgatcatcgacccgaagatgccccgcgagggtgtg
ttccaccggggcgtcccgatccccgtcccgcctctggaggtgctgaagctgggggagcag
atgacccaggaggcccgcgaacacctcttcctcgtgctcttcttcgacaacaagaggacc
tggcaatggctgccgcgctccaaactggttcctctgggcgtcaatcaggatctggacaaa
gagaagatgctggaaggcaggaagtcgaacattaggaagtcggttcaggtggcgtatcac
cgggccatgcaacaccggaacaaagtccagggcgacccgagcagcgacaccagcgacagc
gactga
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