Rhinichthys klamathensis goyatoka (western speckled dace): 130077416
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Entry
130077416 CDS
T09701
Symbol
dhx33
Name
(RefSeq) ATP-dependent RNA helicase DHX33
KO
K17820
ATP-dependent RNA helicase DHX33 [EC:
5.6.2.6
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130077416 (dhx33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rkg03009
]
130077416 (dhx33)
Enzymes [BR:
rkg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
130077416 (dhx33)
Ribosome biogenesis [BR:
rkg03009
]
Eukaryotic type
Other ribosome biogenesis factors
130077416 (dhx33)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
WHD_HA2
AAA_22
AAA_19
Motif
Other DBs
NCBI-GeneID:
130077416
NCBI-ProteinID:
XP_056098631
LinkDB
All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MPHDPDPPPAKRFKPGSPFFRLDKKPGMLLPRAGHAPVSVDAQRRQLPIYPSRTQVINQL
RQLHNAVFIGETGSGKTTQIPQYLYEAGIGRQGIIAITQPRRVAAISLAGRVAEEKRVQL
GKLVGYTVRFEDVTSSETKLKFMTDGMLLREAIGDPLLLRYTVVILDEAHERTVHTDVLF
GVVKAAQRKRTEHNKIPLKVFVMSATMDVDLFSQYFNKSPVLYLEGRQHPIQIYYTKQPQ
SDYLQAALVTIFQIHQEAPPSHDILVFMTGQEEIEALARTCRDISKHLPETCAPMTVVPL
YASLPPTQQLRVFQPAPKGSRKVILSTNIAETSITISGIKYVIDTGMVKAKRYNPESGLE
VLAVQRVSKAQAWQRAGRAGREEAGSCYRLYTEDEFDNLANMTVPEIQRCNLASVVLQLL
ALGVPDVLNFDFMSKPSPESMRTAVDQLSILGAVERKDDQVTLTPLGKKMACFPLEPRFS
KTLLISPEFCCTEEVLTIISLLSVDSVLYNPPARREDVLAVRKKFISSEGDHMTLLNIYR
AFRKVSGNKEWCRENFVNSRNMGLVLEVRSQLRDICIKLNMKLESSLSDLANVRRCLAHG
LFMNAAELHLDGSYVALDTHQTVSIHPSSVLFQAKPAYVVFNELLHTSRCYMRDLCLVDS
DWLHEAAPEYFRRKLRATKS
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgccccacgaccccgaccctcctccggcgaagagatttaagccgggctctcccttcttc
cgcctggataagaagcccggcatgctgttgcccagagcgggacacgcgcccgtcagcgtg
gacgctcagaggagacagttgcccatttacccgagcaggacacaggtgatcaaccaactc
cgacaactgcacaatgctgtgttcatcggtgagacgggctcgggtaaaaccacgcagatc
ccgcagtacctgtatgaggcgggcatcgggcgacagggcatcattgccatcactcaaccc
cgccgggtcgctgccatatctctggctggaagagtggccgaggagaagagagttcagctc
gggaaactggtcggctacacggtgcgctttgaagacgtcacgtcgtcggagaccaagctg
aagttcatgacggacgggatgttgttgcgagaggcgatcggggatccgctgttactgcgc
tacacggtggtgatcctggacgaggctcacgagcgcactgttcacactgatgtcctgttc
ggcgtggtgaaggccgcccagcgcaaacgcacagaacacaacaaaatacctctgaaggtg
tttgtgatgtctgccaccatggacgtggatctgttctctcagtacttcaataaatcacct
gttctgtatctggagggccgacagcatcccattcagatctactacaccaaacagcctcag
tccgactatctccaggcagcgctggtcactatatttcagattcaccaggaagctcctccg
tcccatgatatcctggtgtttatgacgggccaggaggagattgaagcgctggcgcgcacc
tgtcgggacatatcgaagcacctgcctgagacctgtgcaccgatgacagtcgtcccgctg
tacgcctcgctgccgcccacccaacagctccgggtctttcagcccgcgccaaagggatcc
aggaaagtgattctctccacaaacatcgcagaaacgtccatcaccatctccggcatcaaa
tatgtcatagacacggggatggtgaaggccaaacgctacaatccagagagtggtctggag
gtgctggcggtgcagcgagtgtctaaagcccaggcgtggcagcgggccggtcgggccggc
agagaagaggccgggtcatgctaccgtctctacactgaagacgagttcgacaacctcgcc
aacatgaccgtgcctgagatacagaggtgtaatctggccagtgtcgttctgcaactgctc
gctctgggagttcctgatgttctcaacttcgacttcatgtctaaaccatcgcctgagtcg
atgcggacggctgtggatcagctcagtatcctcggggccgtcgagaggaaagatgaccag
gtgacattaacacccctgggcaagaagatggcctgtttccctctagagcctcgcttctcc
aaaacgctcctgatctcgcctgagttctgctgcactgaggaggttctgaccatcatctcg
ctcctctccgtcgactcggtcctctacaacccccccgcccgcagagaagacgtcctcgcc
gtccgcaagaagttcatctccagcgagggcgaccacatgacgctcctcaacatctacagg
gcctttaggaaagtcagcggtaacaaggagtggtgtcgagagaacttcgtgaacagcagg
aacatggggctggtgctggaggtccgttcgcagctgagagacatctgcatcaagttgaac
atgaagctggaatcgtctctatcagacctggctaacgtgcggcgctgtctagctcacggt
ttgttcatgaacgctgcagaactgcatctggacggcagctacgtggctctggacacccat
cagacggtgtccatccacccctcatcggtcctgttccaggccaagccggcatacgtggtg
ttcaacgagctcctgcacacgtctcgctgctacatgagggatctgtgcctggtcgattct
gattggctgcatgaagcggcgcccgagtatttccgccgcaagctgcgcgcaacaaagagt
taa
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