Rhinichthys klamathensis goyatoka (western speckled dace): 130077431
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Entry
130077431 CDS
T09701
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04514
Cell adhesion molecule (CAM) interaction
rkg04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
130077431 (lrrc4ba)
04517 IgSF CAM signaling
130077431 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rkg04515
]
130077431 (lrrc4ba)
Cell adhesion molecules [BR:
rkg04515
]
Immunoglobulin superfamily
NGL family
130077431 (lrrc4ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
ig
LRR_14
V-set
LRRNT
Ig_2
VEGFR1-3_N_Ig-like
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
130077431
NCBI-ProteinID:
XP_056098645
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MRITTVTSLPSPSPLLLLLVHLLLRLILPGQDAVGAASTCPTPCSCSNQASRVICTRRNL
EEVPDSISNNTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDY
ISDAAFVGLINLRYLNLGMCGLKDIPNLTPLVRLEELELSGNRLEIIRPGSFQGLESLRK
LWLMHSQMSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQKLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPYLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTGTSMTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNSAGNTTATAVLNVTAADVSVNYTYFTTVTVETVENTGDEESALRAINETIIHIPGST
PSGHLWDKVVPTTASSLSILGSSSSPTATKPTFTIPISEPNYPSGLDDVMKTTKIIIGCF
VAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDEIGAGTGIRGSGISGGSTVP
QGGSGGQSLRLHHPEIVNLPNLARAEHLNHYYKAHHFNNNMMGLGLGGGSGGGLNNNNNP
SPCSQAQNIPISCTQVPVSAGSTSCSMPSSMPLPTLGIHGSLKGLMSKGQNPQIEPLLFK
SGSKENVQETQI
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcaccacggtgaccagccttcctagtccctcccccctcctcctcttattggtt
catctgctgttgcggctcatcctcccaggccaagacgcagtcggagccgcctccacctgt
cccacgccgtgcagttgttctaatcaagccagtcgagtgatctgtacaagacgaaactta
gaagaggtgccagacagtatatccaacaacacacgatacctcaacttacaggagaactcg
atacaggtgataaaatcagacacattcaaacatttgcggcacctggagatcctccagctc
tccaagaaccagattcgtcagatagaggtgggtgctttcaatggcctcccaaacctcaac
actttggaactgttcgacaaccgcctcacactggtgccatcgcaagcctttgagtacctc
agcaagctgcgagaactgtggttacgaaacaatccaatcgagaccttaccaggctatgcc
tttcaccgcgtcccctcgctgcgacgtcttgacctaggcgaactcaaaaagctggattat
atatctgacgcagcctttgttggactcatcaacttgcgctacctgaacttgggtatgtgt
ggcctgaaggacatccctaacttgactcccctggtgcgactggaggagctagagttgtct
gggaaccgtctagaaatcatcagacctggatccttccaaggcctggaatctttacgcaaa
ctatggctcatgcattctcagatgtcggtcatcgagcgcaatgctttcgatgatctcaag
aacctagaggagctcaacctatcccacaattccctacactctttgccccatgaccttttc
acacccttgcagaagctggagcgagtacatctcaatcacaacccttgggtgtgcaactgt
gatgtgctgtggttaagctggtggctgaaagaaaccgtgccgagcaacacgacctgctgt
gcacggtgccatgcaccaccctacctaaagggaaagtacattggagagttggaccagagc
catttcacctgctatgcccccgtgattgtggagccgcccactgacctcaatgtgacagag
ggcatggctgctgagctcaagtgtcgcaccggtacctccatgacttctgtgaactggatc
acaccgaatggcaccctaatgacccatggctcctaccgggtcaggatttccgtgctgcat
gatggcacactgaatttcaccaatgtaactctgcgtgacactggccaatacacctgcatg
gtgaccaactcagctgggaacactacggcaactgctgtcctgaatgtgaccgcagcagac
gttagcgtcaactacacctacttcaccacggtcactgtagaaactgtggagaatacgggg
gatgaagaatctgcattgcgtgccatcaacgagaccattatccacattcctgggtcgaca
ccttctgggcacctctgggataaagttgtgcccactactgcctcttctctctcaatcctt
ggctcatcgtcttctcccacagcaaccaaacccactttcacaatccccatttctgagccc
aactacccctctggactagatgatgtcatgaagaccaccaaaatcatcattggttgcttt
gtggcaattaccttcatggccgctgtcatgctggtggtgttctacaagctgcggaagcag
caccagttgcacaaacaccacgggccggcacgagccatcgagatcattaacgtcgaagat
gaaatcggagcgggaacgggcatccgtggcagcggcatctcaggaggatccacagtaccg
caaggagggtccggcggacagagcttgcgactgcaccaccctgaaatcgtcaacctccca
aaccttgcacgagcagagcatctcaaccattactacaaggcccatcacttcaacaataac
atgatgggtctgggccttggtggaggctcgggcggaggcctaaacaataacaacaaccct
tcgccctgctcccaggcccagaatatccccatctcttgcacgcaggtgccagtctctgca
ggtagtacatcatgttccatgccttcttcaatgcctctgccgacccttggcatccacggg
tcactgaaaggcctgatgagtaaagggcagaacccacagattgagccgttactattcaag
agcggctccaaggagaatgtccaagaaacccagatctga
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integrated database retrieval system
