Rhinichthys klamathensis goyatoka (western speckled dace): 130077539
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Entry
130077539 CDS
T09701
Symbol
tulp4a
Name
(RefSeq) tubby-related protein 4a isoform X1
KO
K24720
tubby-related protein 4
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
130077539 (tulp4a)
Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
Other domain-containing proteins
Tubby family proteins
130077539 (tulp4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
ANAPC4_WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_Prp19
Beta-prop_CAF1B_HIR1
WDR55
UvrD_C
DUF3527
Motif
Other DBs
NCBI-GeneID:
130077539
NCBI-ProteinID:
XP_056098790
LinkDB
All DBs
Position
Unknown
AA seq
1723 aa
AA seq
DB search
MFAAVENGPVLCSDSNILCLSWKGRVPRSEKEKPVCRRRYYEEGWLATGNGRGVVGVTFT
SSHCRRDRTTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDTDGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHILLHEAEGIASMAWNYPSFLVEDSSESDTDSDEYTPL
QGHSLKPVLTVCFTSGDISLMSNYDDLSPTLIRTGLKDVVVQWCSQGDLLAVTGMERLVM
TSDPSQMTRNAIVKFYNVSGENIYSLETPAQRPISTLCWGHRDSRLFLACGPALYVLRVE
HRVASLQMLCQKAIASAVHEEKDVAKLSMPSRLSTYVSSAFAPTVKPPIPDPNNMRDFVS
YPTTGNERLHCTMKRTEDNPEVGGPCYTLYLEYLGGLVPILKGRRISKLRPEFVIMDPKT
DGKTDEVYGNNFIPSMIDSCNCSDSSDIELNDDWVGKKSPKISRGSKSPKLPRDLVCPFT
NRINIDPRKSPKISRTTQEISRSPRLPIRKPSIGSPSLTRREFPLDDITQHNYLAQVTSN
IWGTKFKIVGLAAFLPANLGAVIYKTSLLHLQPRQMTIYLPEVRKISVEYINLPMFSPNV
FSEDEDDLPVTGASGITDDNPTCTVNIPIAPIHSPAQAMSPTQSIGLVQSLLANQNVQLD
VLSNPTSTVAPPGVPDQGQQDNVLTAKYTVPARYSSPGQVIFGGMDVGRLLVVQSQQQQQ
SQQQQHQLQQHYQQQQLQQQLQQYQLQQQQLLQHQHMQQQQQQHMQQQIQQMQQQQQMQQ
QLQHQIQQQHMQMQLQLQHQQMQQQLQQQQQQHQIQIPVPTLPSGQPSNPVIQLPQTTIQ
VAPPSAEHSTERVEHELLLKIKTTRSAPQLAEGDAVVFTAPLEISKMNPPPPYPGTVSAV
SSTNSSSSGSNTSTQSSGDVCLKKGDLTLYPTGAQATQYQTPLGYERITTFDSSGNVEEV
CRPRTRLVCNQNVYTLQGPGSSATLRVSSSSSTVDGKKVQMPYASATLNRLTVPRYSIPS
GDPPPYPDSANQVGGGRNPGQRLDSSLIHATLRRNSREAALKVSQMLDPQRTLPSKAKAN
TLSASYQPRGPTALYTCSQCSSNNGISSGASSSGSNGIAGGTIIRQDFPPSGGGAPHSTV
IVHSNSASPLPSQSSYNLLSMDGTGGNGNRDRTEYINSAFTEDESLNQSLRQMALNTEVV
SLTVKRPPPYQWDPSATEEIWVPQERTPTLPPSGVPPASSHKPPPLVLSPAQHLDVSRLP
FVLSPKSPTSPNVTTFQQAGAYQIALPYPTSAGYNAPPLASPRPQSPKELVAPLPFSQQD
QAVVLPPGYPPNLPNLACFPPMYPGTTTCSSLPVTPISLHPWGSYNPCPPLPSPQGPAPS
LPPKTSHMLDKPVLSPPPQPPPLSSPPPDPQNVVSPPEAIAEAGEGFQEVLSLNESPVPQ
RADRFGKKNRKRLENSRTDEANVPAITEGGGNKSKKEGRALGDFNSLISSPRLGGRDKKK
PKGQKEQLKAKKLSKATTNEFQDSSESEPELFISGDELMNQSQSGKKSWKTKRNLRAGGC
ELDEIKCRKANEKEDRGLGSQGFVYIMANKQPLWNEATQVYQLDFGGRVTQESAKNFQIE
LEGRQVMQFGRIDGNAYILDFQYPFSAVQAFAVALANVTQRLK
NT seq
5172 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccgcagtggagaacggtcccgtcctgtgcagcgactccaacatcttgtgcctg
tcctggaagggtcgcgttccccggagcgagaaggaaaagcccgtgtgcaggagacgctat
tatgaggaaggctggctcgccacggggaacggcaggggcgtcgtgggcgtcacgttcacc
tccagccactgcaggagagaccggacgaccccacagcgcatcaacttcaacctgagggga
cacaatagtgaggtggtgttggtgaggtggaacgaacccttccagaagctggcgacctgt
gacacggacggggggatattcgtgtggatccagtacgagggccgctggtctgtagagctg
gtcaatgaccgaggagcgcaggtgagtgacttcacctggtcacatgacggcacgcaggcg
ctgatctcctaccgggacggtttcgtgctggtcgggtcggtgagcgggcagcgccactgg
tcctctgaaatcaacctggagagtcagatcacatgtgggatctggacccccgacgaccag
caggtgttgttcggcacggcggacggtcaggtgatcgtcatggactgtcacgggcgcatg
ctggctcatattctcctccacgaggccgagggcatcgccagcatggcctggaactatccc
agcttcctcgtggaggacagcagcgagagcgacacggactccgatgagtacacacctctg
cagggtcacagtctgaagccggtgttgaccgtctgcttcacgtctggagacatcagtctg
atgagcaactatgatgacctctcgccgacgttaatacgcactggcctcaaagatgtggtc
gtgcagtggtgctctcagggcgacttgctggctgttactgggatggagagactcgtaatg
acctctgacccttcccaaatgacccgaaatgccattgtgaagttttacaatgttagtggt
gaaaatatttattcactggaaacacctgctcagaggccgatcagtacgctgtgttggggc
catcgagactcgcgtctgtttctggcttgtggcccggcgctgtacgtgcttcgagtcgaa
caccgagtcgccagcctgcagatgctgtgccaaaaggccatcgccagtgcggttcacgag
gagaaagacgtggccaagctcagcatgccctctcgcctaagcacatacgtgtcttctgcc
ttcgctcccaccgttaagcctcccatcccagatcccaacaacatgcgagactttgttagt
tatccaacaacgggtaacgagcgtttgcactgcaccatgaagcgcaccgaggacaaccct
gaggtcggcggcccgtgctacactttatatctggagtatctaggagggcttgttcctatt
ctgaaaggccggaggatcagcaaacttcgccctgaattcgtcatcatggacccaaagact
gatgggaaaacagatgaagtctatggcaacaacttcatcccctccatgattgacagctgc
aattgctcagattctagtgacattgagctcaacgatgattgggttggaaagaaatcacca
aagatctccagagggagcaagtctcccaaacttcccagagacttagtgtgtccctttacc
aacaggataaatatagatccccgcaagtcccccaagatctcccgaaccacgcaggaaata
tcccgatcgccacggttacccattcgcaagccctccattggctctccgagtctgacccgg
cgagagtttcccctagatgacatcacacagcacaattatctcgcgcaagttacgtctaac
atatggggaacaaagttcaaaattgtggggcttgcagcatttttgcctgcaaatcttggt
gcagttatctacaagactagcttgcttcacctccagcccagacagatgaccatatacctc
cctgaggtgaggaagatctcagtggaatacattaacctacctatgtttagtcctaatgtc
ttcagtgaggatgaggatgacctgccggtcacaggagcatcaggaatcactgatgataat
ccaacttgcactgtcaacatacctattgcccccatacacagccctgcccaagccatgtcc
ccaacacaaagcatcggcctagtccaatccctactagccaatcaaaacgtccaattagat
gtattatccaatccgacttcaactgtggcaccacctggagtcccagaccaaggacagcag
gacaatgtgctcacggcaaaatataccgttcctgcacggtattctagtcctggacaggta
atatttggaggaatggatgttggtcggcttttagttgtgcagtcccaacaacaacagcaa
tcgcaacaacaacaacatcagttgcaacaacattatcaacaacagcagctacagcaacag
cttcaacaatatcaactgcagcaacaacagttattgcagcatcagcacatgcaacaacag
caacagcaacacatgcaacagcaaatccaacagatgcagcagcaacagcaaatgcagcaa
cagcttcagcatcaaatccaacagcaacacatgcaaatgcaacttcagctacagcaccag
cagatgcagcagcagttgcaacaacagcagcagcagcatcagatccaaatccccgttcca
actttgccctcaggtcaaccatcaaacccagtcattcaacttccccaaactacaatacaa
gtcgctcccccttcagcagagcacagtacagagcgggtggagcacgagctcctgcttaaa
atcaaaacgactcgttctgccccacaactggctgagggtgatgcagtggtttttaccgcc
cctcttgagattagcaaaatgaacccgcctcctccgtaccccggcacggtttcagccgtt
tcttctacgaactcctcctcatcggggagcaacactagcactcaatcctcaggggacgtt
tgtctaaagaaaggggatctgactctgtatccaactggtgcacaagcaactcagtaccaa
accccattgggatacgaacgcatcaccacgtttgacagcagtggaaatgtggaggaggtg
tgccgtccgcgcacgagactagtttgcaaccagaatgtttacacgcttcagggcccggga
agctctgcaaccctcagggtctcgtcatcttcctctactgttgacgggaagaaggtgcaa
atgccctacgcctcagccacgttaaaccgtctcactgtgccaaggtactctataccaagc
ggagacccgcctccttaccctgactcagccaatcaggttggaggagggcgtaaccctggc
cagagattggacagcagtttgattcatgctaccttgaggcgaaacagtcgggaagctgcg
ctaaaggtctcccagatgcttgatccccagaggactcttccctccaaggctaaagctaat
accttgtccgcttcgtaccaaccgagaggaccgacggctctttatacgtgcagtcagtgc
agtagtaataatgggattagcagtggggcttccagcagtgggagtaatggaatagctggt
gggacaatcattagacaagatttcccaccttcagggggtggtgcgcctcacagcactgtt
atagtgcactcaaacagtgcctcgcctttgccttcccaatcctcctacaatttgctcagt
atggatggaaccggtggcaatggaaaccgagacagaactgagtacatcaactccgccttt
acagaggacgagtcgttgaatcagtctctaaggcaaatggctcttaacacagaggttgtg
agtttgacagtcaaacggcctcctccgtatcaatgggatccatccgctactgaagagatc
tgggttcctcaagagcgtacgccgactcttcccccttctggagtccctcctgcttcttcc
cacaagcctcctccactcgttctcagccccgcacaacatctggatgtttcccgactcccg
tttgtcctctcgcccaagtctccgacaagtcctaatgtcacaactttccaacaagcagga
gcgtatcagattgcattgccctatccaacaagtgcagggtataacgctcccccgttagct
tctccacgtccccaatctcccaaagagttggtcgctcctcttcccttctcccagcaagat
caagctgtggtcttgccgcctgggtatccgccaaatttgcctaaccttgcttgcttccca
ccaatgtaccctgggacgacgacttgttctagtttaccggtgactcccatttctcttcat
ccatggggttcttataatccctgtccacctttgccaagtcctcaaggtcctgctccttcc
cttccaccaaagacttcccatatgttggataaacctgttctttctcctcctcctcaacca
cctccactttcttcgccacctccagatccccaaaatgtggtcagtcctccggaagctatt
gctgaagccggggaaggctttcaagaagtgctttcgctcaacgaaagcccggttcctcaa
agagcagatcggtttgggaagaagaaccgaaagcggttggaaaacagtcggacagatgaa
gccaacgttcccgcaatcacagaaggaggagggaataagtctaaaaaagagggtcgtgcc
cttggtgacttcaactcgcttatctcaagtcccagattaggtggacgagacaagaagaaa
ccaaaaggccagaaagagcagctgaaagccaaaaagctaagcaaggccactacgaacgag
ttccaggacagttcggaaagcgaaccggagcttttcatcagcggagatgagctgatgaac
cagagccagagcgggaaaaagagctggaaaacgaaaagaaacttgcgtgcgggaggatgc
gagctggacgaaatcaaatgccggaaggctaacgagaaggaggaccgtgggctcgggagc
caggggttcgtctacatcatggcaaacaaacagcctctgtggaacgaagccacgcaggtt
taccagctggactttggaggaagagtcacgcaggaatcggccaagaacttccagattgag
ctcgaggggagacaggtgatgcagttcggacggatcgacgggaacgcgtacatactggac
ttccagtatcccttctccgccgtgcaagcttttgctgtagcgctcgctaacgtcacccag
cgcctcaagtga
DBGET
integrated database retrieval system
