Rhinichthys klamathensis goyatoka (western speckled dace): 130077700
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Entry
130077700 CDS
T09701
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03030
DNA replication
rkg03410
Base excision repair
rkg03420
Nucleotide excision repair
rkg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130077700 (rfc4)
03410 Base excision repair
130077700 (rfc4)
03420 Nucleotide excision repair
130077700 (rfc4)
03430 Mismatch repair
130077700 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rkg03032
]
130077700 (rfc4)
03036 Chromosome and associated proteins [BR:
rkg03036
]
130077700 (rfc4)
03400 DNA repair and recombination proteins [BR:
rkg03400
]
130077700 (rfc4)
DNA replication proteins [BR:
rkg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
130077700 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
130077700 (rfc4)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
130077700 (rfc4)
DNA repair and recombination proteins [BR:
rkg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
130077700 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
130077700 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_assoc_2
AAA_16
AAA_22
AAA_11
AAA_30
Mg_chelatase
AAA_24
AAA_14
AAA_28
SLFN-g3_helicase
AAA_5
DUF815
RuvB_N
AAA_19
ResIII
Gp44_lid
AAA_7
Kinesin
Cdc6_lid
DUF2428
ATPase_2
AAA_3
Motif
Other DBs
NCBI-GeneID:
130077700
NCBI-ProteinID:
XP_056098988
LinkDB
All DBs
Position
Unknown
AA seq
359 aa
AA seq
DB search
MQAFLKGPSSQSIKAQKPSSSSSSSGGEKKQRALPWVEKYRPKCVDEVAFQEEVVAVLKK
SLEGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVVREKVK
NFAQLAVAGSRTDGKPCPPFKIIILDEADSMTNAAQAALRRTMEKESRTTRFCLICNYVS
RIIEPLTSRCSKFRFKPLANDIQQERLLEICGKENLKYSKDGIDALVKVSDGDLRKAITY
LQSAARLNADREITEQIITEIAGVVPPKVIESLLQICYRGAFEKLELAVKDLIDQGFAAT
NVLNQLHEVIIEEKLSDKHKSAIAEKMAEVDKCLADGADEYLQLLSLGSVIMQQAAQNT
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtttttgaaaggaccttcctcacagagtattaaagctcagaaaccttcatca
tcttcatcatcatcaggtggagagaagaagcagagagcacttccctgggtggagaaatac
agaccaaagtgtgtggatgaagtggcctttcaggaggaggtggttgcagtactgaagaag
tctctagagggcgctgatctgcccaacctgctgttctatggaccgcctggaaccggaaag
acgtccaccatcctcgcggcggccagagagctttatgggcccgagctgtaccgacagagg
gtcctggagctcaacgcgtcggatgaacgagggatccaggtggtgcgagagaaggtgaag
aacttcgcccagctggcggtggccggctcgcggaccgacgggaaaccttgtccgccgttc
aagatcataatcctggacgaggcggactccatgaccaacgcggctcaggcggcgctcaga
cgcacgatggagaaggagtcgcgaaccacgcggttctgtctcatctgcaactacgtcagc
cggatcatcgagccgctgacctccagatgctccaagttccgcttcaaaccgctggccaat
gacattcagcaggagcgactgctggagatctgcgggaaggagaacctcaagtacagcaaa
gatggaatcgatgctctggtgaaggtgtcagatggagatctcaggaaagccatcacgtat
ctccagagcgccgcgagactcaacgctgaccgggaaatcactgaacaaatcatcaccgag
atcgccggggtggttccacccaaagtgatcgaatcgctcctccagatctgttacagaggc
gcttttgagaagctggagctcgctgtgaaggatctgatcgatcagggattcgctgcaacc
aacgttctcaaccagttacacgaggtcatcatcgaagagaagctgagcgacaaacacaaa
tccgccatcgcagagaagatggccgaggtggataagtgtctggccgacggtgctgacgag
tatctgcagttattgagtctcggctcggtcatcatgcagcaagccgcacagaacacctga
DBGET
integrated database retrieval system
