Rhinichthys klamathensis goyatoka (western speckled dace): 130077704
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Entry
130077704 CDS
T09701
Symbol
sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130077704 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rkg04812
]
130077704 (sptbn1)
Cytoskeleton proteins [BR:
rkg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
130077704 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
130077704 (sptbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
SOS1_NGEF_PH
PH_13
Motif
Other DBs
NCBI-GeneID:
130077704
NCBI-ProteinID:
XP_056098995
LinkDB
All DBs
Position
Unknown
AA seq
2338 aa
AA seq
DB search
MDLEWESGAPEGFYQEPSFPAQMPFNYNQLEGRFKQLQDEREAVQKKTFTKWVNSHLARV
SCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQFLKEQRVHLE
NMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDALLLWCQMKTAGYP
NVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLL
DPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIETEKMIEKYESLA
SDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGNLEVLLFTIQS
KMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQEKLEQLARRFDRKA
AMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERVQAVVSVARELEAE
NYHDIKRIAARKDNVLRLWEYLLELLKARRQRLEMNLGLQRVFQEMLYIMDWMDEMKMLL
LSQDYGKHLLGVEDLLQKHALVEADIGIQADRVKAVNANAQRFAVDEEGYKPCDPQVIRD
RVSHMEFCYQELTQLASERRARLEESRRLWKFFWEMAEEEGWIREKEQILSSDDCGKDLT
GAVRLLSQHRALEDEMSGRSGHLQNTVREGQTMADAGHFGEAKIRERIADVQAQWAALEQ
LALVRKTRLEEACSLHQFQVDADDVDAWTLDALRIVSTSDVGHDEFSTQALVRKHKDASS
EVASYRPVIDALHEQAQSLPPEHAKAENVSERLAGIEERYREVSELTRLRKQALQDALAL
YKMFSEADACELWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEMNNQASRVAVVNQI
ARQLIHNGHPSEKDIKTQQDKLNTRWSQFRDLVDLKKESLNSALGVQNYHLDCNETKSWI
REKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEAKLGDLRGEADRLAGEHPDQAK
AITGRLAEITSVWEEMKETLRNREESLGEASKLQQFLRELDDFQSWLSRTQTAIASEDMP
NTLAEAEKLLAQHEGIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLRQRLQALDTGW
NELHKMWENRQNLLSQSHAYQIFLRDTKQAEAFLNNQEYVLAHTEMPITLEGAEAAIKKQ
EDFMTTMDANEDKINSVVEAGRRLASDGNVNADRIQERATSIDDRHKKNREAAVELLMRL
KDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMAELQSNKEWLD
KIEKEGKQLVSEKPETDAVVKEKLAALQKMWTELETTTQTKAQCLFDANKAELFTQSCAD
LDKWLVGLEGQIQSDDYGKDLTSVSILLKKQQILENQVEVRQREVEELQSQAHVLRQEGK
DTDEVDGRRVEVEQKFQELLDPLLKRKNFLMASREIHQFNRDVEDEILWVEERMPIATST
DHGNNLQTVQLLIKKNQTLQKEIQGHQPRCDDIFERSQSILKADSPNVESIRSRLSDLQE
LWSLIMQETEKRHSRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEQSSVAMLK
KHQILEQAVEDYAETVHQLSKTSRGLVAANHPESERIGMRQSQVDKLYAGLKDLSEERRG
KLEERFRLFTLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQ
ERVDGVNRMADELINAGHADAATVAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYH
DAKEILGRILDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAVRLQS
AYAGDKADDIQRREGEVLEAWRSLLEACEGRRARLLDTGDKFRFFSLVRDLMLWMEDVIR
LIETQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLARKHYASEEIKEKL
LQLTDKRKDMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPYLSSREMGQSVDEV
EKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERKRKPPTPEPVQDTDTQ
QREGEQIAQNGLPSDQDSPRDGVEGEMNGVAERSSKEPSPIPSPSADRRGKGSQSSTLPA
KAQENPAAQLEAFLHRKHEWEGHNKKASSRSWHNVYCVINNHEMGFYKDNKSAGQGIPYH
NEIPISLKDAVCEVAVDYKKKKHVFKLRVTDGNEYLFQAKDDEEMNTWIQAIQNAGSISS
SSEKSEITPSNQSTPASSRAHTLPATVTMTTESSPGKREKDKEKDKEKRFSLFSKKKQ
NT seq
7017 nt
NT seq
+upstream
nt +downstream
nt
atggatttggagtgggagtccggggcccccgagggcttttaccaggagccgagcttcccc
gcgcaaatgcccttcaactacaaccagctcgaggggcgtttcaagcagctgcaagatgag
cgagaggccgtgcagaagaagaccttcaccaaatgggtgaactcgcacctggcgcgcgtg
tcctgtcggatcacggatctgtacatggatctccgggatggacggatgctcatcaaactg
ctggaggtgttgtccggagagaggctgcccaagccgacgaagggccgcatgcggatccac
tgcctggagaacgtggacaaagccctgcagttcctcaaggagcagcgcgtgcacctggag
aacatggggtcacatgacatcgtggacgggaaccaccggctcacgctcggactcatctgg
accatcatcctccgcttccagatccaagacatcagcgtggagacggaagataataaagag
aaacgctcggccaaggacgctcttcttctgtggtgtcagatgaagaccgcaggatatccc
aacgtcaacatccacaacttcaccaccagctggcgcgatggcatggcgttcaatgccctc
attcacaaacacaggccagacctgattgatttcgacaaactgaagaagtccaacgctcac
tacaacctgcagaacgccttcaacctggcggagcaacacctgggtctcaccaaactcctg
gaccccgaagatatcagcgtagaccatccagacgagaagtccgtcatcacttatgtcgtc
acatactaccattatttctccaagatgaaggccttgaaggtggagggcaagcgtatcgga
aaggtgctcgacaacgccatcgagaccgagaagatgatcgagaaatatgaatctctggcg
tctgatctgctggagtggattgaacaaaccatcatcatcctcaacaatcgaaagtttgca
aactcactggtgggagtccagcagcagctccaggccttcaacacctacaggaccgtggag
aaaccacccaaattcactgagaagggaaacctggaggtgcttctgtttactatccagagc
aagatgagggctaataaccagaaggtgtacatgccacgcgagggcaaactcatctcagac
atcaacaaggcgtgggagcgtctggagaaggccgagcacgagcgtgagttagcgctgagg
accgagctgatccgacaggagaaactggagcaactcgccagacgcttcgaccgcaaggcc
gccatgagggagacctggctgagcgagaaccagcgcctcgtgtcacaggacaatttcgga
ttcgacctccaggcggtcgaggcggcgactaaaaagcacgaggcgatcgagacggacatc
gcggcgtacgaggagcgcgtgcaggcggtggtgtccgtggccagagagctggaggcggag
aactaccacgacatcaagcgcatcgcggcgcgtaaagacaacgtcctgcgcctgtgggag
tatctcctggagctgctcaaagcccgccggcagaggctggagatgaacctcggcctgcag
cgcgtcttccaggagatgctctacatcatggactggatggatgaaatgaagatgctgctg
ctttcccaggattacgggaagcacttgctgggagtggaagatctcctgcagaaacacgcg
ctggtggaggccgacatcggcattcaggccgaccgcgtcaaagccgtcaacgccaacgct
cagaggttcgccgtggacgaggagggctacaaaccctgtgaccctcaggtcatccgagac
cgcgtgtcccacatggagttctgctaccaggagctgacccagttagcatccgagcgtcgc
gcacgcctcgaagaatcccggcgtttgtggaagttcttctgggaaatggctgaggaagag
ggctggattcgggagaaagagcagatcctttcctcagacgactgtgggaaggatttaacc
ggcgccgtccgcctattgagtcaacatcgtgctctggaagacgagatgagcgggcgctcg
ggacacctccagaacacggtccgcgagggccaaacgatggccgacgccgggcatttcggc
gaagctaagatccgtgagcgcatcgcggatgttcaagcgcaatgggccgctctggaacag
ctagcgttggtgaggaaaacccgtttggaagaagcttgtagccttcaccagttccaggtc
gacgctgacgacgtggacgcctggactttagacgcacttcggatcgtctccacctcagat
gtcggccatgatgagttttcaactcaagctttggttaggaaacacaaagacgcgtcgtcc
gaggttgctagttatcgtccggtgattgacgctctccacgaacaggcgcagtctcttcct
cccgaacatgcgaaggcggagaacgttagcgagcggctagccggcattgaggaacgctat
agagaggtttcggagttgacccggctgaggaaacaggccttgcaagacgccctggcgctc
tataagatgtttagcgaggcggatgcgtgtgaactctggatcgatgagaaagagcagtgg
ctcaacagcatggagatcccagagaagctggaggacctggaggtcattcagcacaggttt
gagagtctggagcctgaaatgaataaccaggcctcacgtgtggcagtcgtcaatcagatc
gccaggcagctgatacacaacggacacccgagcgagaaagacatcaaaacccaacaagac
aagctcaacaccaggtggagtcagttccgcgacctggtggacctgaagaaagagtccctg
aactccgccttgggcgtgcagaactaccacctcgactgcaacgagaccaaatcctggatc
cgcgagaagacaaaagtcatcgagtccactcaagagctgggaaacgacctcacaggtgta
atggcactgcaacgcaaactcaccggcatggagcgcgacctggccgccatcgaagccaaa
ctgggagatctccgcggcgaagcggatcgtttggccggagaacatcccgaccaggccaaa
gccataacagggcgactagcggaaatcacctcggtttgggaagagatgaaagaaacgctt
cgaaaccgagaggaatctcttggggaagccagtaaactccagcagttccttcgcgaactg
gacgatttccagtcttggctttcccgaacgcaaacggccatcgcgtccgaagacatgccg
aacacgctagccgaggcggagaagcttctagctcaacatgaaggcatcaagaatgagatt
aacaactatgaagaggactatcagaagatgcgagacatgggtgagatggtgacgcaggga
cagacggacgcccagtacatgttcctgaggcagaggctccaggctctggacaccggctgg
aacgagcttcacaagatgtgggagaaccggcagaaccttctgtcacagtctcacgcctat
cagatcttcctcagagacaccaaacaagccgaggccttcctcaacaaccaggagtatgtt
ctggcccatacggagatgcccatcaccctggagggggcggaagctgccattaagaaacag
gaggacttcatgaccaccatggacgccaatgaagacaagatcaacagtgtggtggaggcc
ggcaggagactggccagcgatggaaacgtcaatgccgaccgcatccaggagagagcaacc
tccatcgacgaccggcataagaagaaccgtgaggcggctgtggagctgctcatgaggttg
aaggacaacagagacttgcagaagttcttgcaggactgccaggagctgtccctgtggatc
aatgagaagatgttgacagcacaggacatgtcctacgatgaagctcgaaacctgcacagc
aaatggctcaaacatcaggccttcatggccgaactgcagtccaacaaagaatggctggac
aaaatcgagaaggaagggaagcagctggtctcggagaagccggagacagacgctgtggtg
aaggagaagttggcggcgctgcagaagatgtggactgaactggaaaccacgactcagact
aaagcccagtgtctgtttgacgccaacaaggccgaactcttcacacagagctgtgctgat
ctggacaaatggctggtgggcctggagggtcagatccaatcggacgactacggcaaagac
ctgaccagcgtcagcatccttctcaagaaacaacagatcttggagaaccaggtggaggtg
cgtcagagagaggtggaggagcttcagtctcaagctcatgtcctgagacaagaagggaaa
gacacggacgaggtggatggacgtcgggtcgaggtggagcagaagttccaggagctgctg
gatccgctgctgaagaggaagaacttcctcatggcctcgcgcgagatccaccagtttaac
cgcgatgtggaggacgagattctttgggttgaggagaggatgcctatcgctacgtcaaca
gaccacggcaacaatttacagacggttcagcttctcatcaagaagaaccagacactacag
aaggagatccagggccaccagccccgctgtgatgatatattcgagcgcagccagagtatc
ctgaaggccgacagcccgaacgtggagtcgatccggtcccgtctgtcggacctgcaggag
ctgtggagtctgatcatgcaggagaccgagaagcggcactccagactcgaggaggcacac
aaagcacagcagtattacttcgacgccgccgaagccgaagcctggatgagcgagcaggag
ctctacatgatgtctgaggagaaggccaaggatgagcagagttcagtggccatgctgaag
aagcaccagatcttggagcaggcggtggaggactacgctgagaccgtgcaccaactgtcc
aagaccagccgaggcctggtggccgccaaccaccccgagagtgagaggatcggcatgcgc
caatcacaggtggacaagctttacgctggactgaaggacctatcagaggaaaggagaggg
aaacttgaggaaaggtttcggctcttcacgctgaaccgagaagtggacgatctggagcag
tggatcgcagagagagaagtggtggctggatctcacgagctcggacaagactacgaacac
gtcactatgctgcaggaacgcttccgtgagtttgcgcgggacaccggaaacatcggtcag
gagcgcgtggacggtgtgaaccgcatggcggacgagctgataaacgcgggtcacgccgac
gccgcgacggtggccgagtggaaggacggcctgaacgaggcctgggccgatctgctggag
ctcatcgacacgcgcacgcagatcctcgccgcatcctatgagctgcacaagttctaccac
gacgccaaggagatcctgggccgaatcctggacaagcataagaagcttccggaagagctg
ggccgagaccagaacacggtggaaaccttgcagaggatgcacaccacgtttgagcacgac
atacaagcgctcgggacgcaggtccggcagcttcaggaagacgcggtgcgcctgcagtcg
gcatacgctggagataaagcggacgacatccagcggcgcgagggcgaggtgctggaggcc
tggaggagtctcctggaggcctgcgagggccggcgcgctcggctgctcgacaccggggac
aagttccgcttcttcagcttagtgcgggacctcatgctctggatggaggacgtcatacgc
ctgatcgagactcaggagaagcccagggatgtttcgtctgtggagcttctcatgaacaac
caccagggcatcaaggcggagatcgacgcccgtaacgacagcttcacggcctgcatcgag
ctgggcaaatctctgctggcacgcaaacactacgcatcagaggagattaaagagaagttg
ctgcagttgacggacaagaggaaagatatgattgacaagtgggaggaccgatgggagtgg
ctaagactgattttggaagtgcaccagttctctcgggacgcgggcgtggcggaggcgtgg
ctgctgggacaggagccgtatctgtccagtcgagagatgggtcagagtgtggacgaggtg
gagaaactcatcaaacgacacgaagcctttgagaaatcagccgctacctgggaggagcga
ttctcagcgctcgagagactgactacgttggagttattggaagtgagacgacagcaagag
gaagaagagaggaagaggaaaccacccacaccggagccggtgcaggacacagacacacag
cagagagaaggagagcagatcgcccagaacggactcccatcagaccaggattcgccacgg
gatggtgtggagggtgagatgaacggagtggccgagaggagctcgaaggagccgagcccc
atcccgtccccgagtgcagacaggcgtgggaaaggcagccagtcctccactcttccggct
aaagcgcaggagaacccggcggctcagctcgaggcgttcctgcaccgcaaacacgagtgg
gagggacacaacaagaaagcctccagcaggtcctggcataacgtgtactgtgtgatcaat
aaccacgagatgggcttctacaaggacaacaagagcgccggccagggcatcccgtaccac
aacgagatccccatcagcctgaaggacgccgtgtgcgaggtcgccgtcgactacaagaag
aagaagcatgttttcaagctcagagttactgatgggaacgagtatctcttccaagccaaa
gatgatgaggagatgaacacatggattcaggccatccagaacgccggcagcatctcctcg
tcctccgagaaatctgagatcacgcctagcaaccagagcacgcccgcctccagccgcgca
cacacgctcccggcaaccgtcaccatgacgaccgaatccagccctggcaaacgcgagaaa
gacaaggagaaggacaaagagaagcgcttcagtctcttcagcaagaagaagcagtag
DBGET
integrated database retrieval system
