Rhinichthys klamathensis goyatoka (western speckled dace): 130077850
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Entry
130077850 CDS
T09701
Symbol
cltcb
Name
(RefSeq) clathrin, heavy chain b (Hc) isoform X1
KO
K04646
clathrin heavy chain
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04142
Lysosome
rkg04144
Endocytosis
rkg05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130077850 (cltcb)
04142 Lysosome
130077850 (cltcb)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
130077850 (cltcb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130077850 (cltcb)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rkg04147
]
130077850 (cltcb)
Membrane trafficking [BR:
rkg04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
130077850 (cltcb)
Exosome [BR:
rkg04147
]
Exosomal proteins
Proteins found in most exosomes
130077850 (cltcb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
130077850
NCBI-ProteinID:
XP_056099183
LinkDB
All DBs
Position
Unknown
AA seq
1684 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPNT
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTEDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAGFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISSKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNNLFASGSYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPTESPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPFY
DSRVVGKYCEKRDPHLACVAYERGQCDQELIHVCNENSLFKSLSRYLVRRKDPELWASVL
LETNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
GQAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEYDNAIITMMN
HPADAWKESQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLIVLSPRLDHTRAVNFFS
KVKQLPLVKVYLRSVQNHNNKAVNEALNNLFITEEDYLALRTSIDAYDNFDNISLAQSLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLQWFLQD
DKKECFAACLFTCYDLLRPDVVLETAWRHNLMDFSMPYFIQVMREYLSKVDAIKEKVDKL
DASESLRKEEEQLTEAQPIVYGTPQLMLTAGPNVAVPPQQPYGYGYPTAPGYGQPAQPGF
GYGM
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatccttcctatccgcttccaggagcacctgcagctccagaacctgggcata
aacccagcaaatattgggtttagcacccttacgatggagtcagataagttcatctgcatc
cgggaaaaggtgggcgaacaggcccaggttgtgatcattgacatgagcgatcccaacact
cccatccgcaggcccatctctgcagatagtgccatcatgaacccagccagcaaagtcatt
gctcttaaagcggcaaaaacccttcagattttcaacattgaaatgaagagcaagatgaag
gcccacaccatgaccgaggatgttacattttggaagtggatctctctcaataccgtagca
cttgtgacagacaatgcggtctatcactggagtatggaaggagactcacagcctatcaaa
gtctttgaccgacattccagtttagcaggctgtcaaattattaactaccgcactgacgcc
aaacaaaaatggctacttttgattggaatttcagcacagcaaaaccgtgttgtgggcgca
atgcaactttactcagtggacagaaaggtgtcgcagccaatcgaaggccatgctgctgga
tttgctcagtttaaaatggagggaaatgctgaggaatccacacttttctgctttgctgtt
cggggacaagctggaggaaagttgcacattattgaggttggaacacctccgactgggaat
caaccttttccaaagaaagcagtcgatgtatttttccctccagaggctcagaatgatttt
ccagttgccatgcagataagctccaagcatgatgtagtctttctcatcaccaaatatggc
tacatccacttgtatgaccttgagacgggtacctgcatctacatgaacaggatcagtgga
gaaaccatttttgtcaccgccccccatgaagccacatctggaataattggcgtgaaccgg
aagggacaggtactgtctgtgtgcgtggaggaggaaaacatcatcccttacatcactaac
gtgctgcagaaccctgatctagccctcaggatggccgtccgcaacaatctggcaggtgcc
gaggagctcttcgctcgaaaattcaacaacctgtttgctagtggcagctactctgaagct
gccaaagttgctgccaatgcgccaaaggggattctgcgcaccccagacaccatccgtcgg
ttccagagtgttcctgcccagcctggtcagacttctcccctgctgcagtactttgggatt
ctgctggaccaaggccagctgaacaaatttgagtcattggagctttgcaggcccgtcctg
cagcaaggccgcaaacagctcctggagaaatggctgaaggaagacaagctggagtgttct
gaagaattgggtgatttggtgaagtctgtggatccaactcttgctcttagcgtttatctc
agagccaatgttcccaacaaagtgatccagtgttttgcagagaccgggcagttccagaaa
attgtactgtatgcaaaaaaggttggctacactccagactggatcttcctgttgaggaac
gtcatgcggatcagtccagaacaaggcctgcagttctcccaaatgctcgttcaagatgag
gaacctctggctgacatcactcagattgtggatgtgtttatggagtataacctgatccag
cagtgcacttctttcctgttggatgccctgaagaacaaccgccccaccgaaagtcctttg
cagactcgtctgttggagatgaacttgatgcatgccccacaggtggcagatgccatctta
gggaaccagatgttcactcactatgaccgggcccatgtggctcagctgtgtgagaaggca
ggtctgctgcagagagctctggagcactacactgacctgtatgacatcaaacgggccgtg
gttcacacccacctgctcaacccagagtggctggtgaacttctttggctctctgtctgtg
gaggactctctggagtgtctgagagccatgctatctgccaacatcaggcagaacctccag
atctgcgtccaggtggcctccaagtatcacgagcagctctccacccagtccctcacagag
ctttttgaatccttcaagagctttgagggtctgttctacttcctgggctccattgtgaat
ttcagccaggatccagaggttcacttcaaatacatccaggctgcctgtaaaactggtcaa
atcaaagaagtggagagaatctgtagagagagcaactgttacgatcctgagcgtgtgaag
aacttcctcaaggaagcaaaactaaccgaccagttgcctctcatcattgtgtgtgaccgc
tttgactttgtccacgacctcgtgctctacttgtaccgcaacaacctgcagaagtacatc
gagatctacgttcagaaggtgaaccccagccgtttacccgtggtgattggtggactgctg
gacgtggactgctctgaggacgtcattaagaaccttattctggtggtcagagggcagttc
tccactgatgagcttgtggccgaggtggagaaaagaaacagactgaagctgcttctgccg
tggttggaggcccgcattcacgagggctgtgaggaacctgctacccataatgctctggct
aagatttacatcgacagcaacaacaaccctgagcgcttcctcagagaaaaccccttctat
gatagccgcgtggtgggcaagtactgcgagaagagggacccccatctggcctgtgtggct
tatgagagaggacagtgtgaccaagagctcatccatgtttgcaatgagaactcactcttc
aagagtctgtcccgataccttgtgcgtcgtaaggaccccgagctgtgggctagtgtgctt
ctggaaaccaacccttacaggagacccctaatcgatcaggttgtgcagactgcactttct
gagacccaggaccctgaggaagtctctgttactgtcaaagctttcatgactgctgaccta
cccaatgaactcattgagctcctggagaaaatcgtcctggacaactccgttttcagcgaa
caccggaacctgcagaacctcctgatcctgacggccatcaaagctgaccgcacacgtgtc
atggagtacatcaaccgcctcgacaactacgacgccccggacatcgctaacatcgccatt
agcaatgagctcttcgaggaggcttttgcgatcttcaggaagttcgatgtgaacacatca
gcagtgcaggttcttatcgagcacattgggaatctggaccgggcctatgagtttgctgag
cgctgtaatgagccggccgtgtggagtcagctggctaaagcacagctgcaaaaggggctg
gtgaaagaggccattgactcttacatcaaagctgacgatccctcagcctacatggaagtg
ggacaagctgcagcccaaagtgggaactgggaggatctggtcaagtttctgcagatggct
cgtaagaaggcccgagaatcttacgtagagaccgagctgatctttgccttggccaagact
aaccgtctagctgaactggaggagtttatcaatgggccaaacaacgcacacattcaacaa
gttggtgaccgatgctatgatgagaagatgtacgatgcagctaaactactttataacaat
gtatctaacttcgggcgtctggcctccactctggtgcatcttggggagtatcaggctgct
gtcgatggggcccgcaaagccaacagcacgaggacctggaaagaggtttgctttgcctgt
gttgacgggaaggagtttcgtctggctcagatgtgtggattacatattgtcgttcatgct
gatgaacttgaggagctcatcaactactaccaggaccgtggctatttcgaggagctgatc
accatgctggaggcggcgctgggcttggagcgcgctcacatgggcatgttcacagaactg
gccatcctctactctaaattcaaaccgcaaaagatgagggagcacctggagctcttctgg
tccagagttaacattcccaaggttttgagggcagctgagcaggctcacctgtggggcgaa
ctagtattcctgtatgataaatatgaggagtatgataatgctatcatcaccatgatgaac
catcctgcagatgcctggaaggagagccagttcaaggacatcataaccaaggtggctaac
gttgagctgtattacaaagccgtccagttttacctggagtttaaaccgctgttactgaac
gacctgttgatcgtactgtccccacgtcttgaccacactcgtgccgtcaatttcttcagc
aaggtcaagcagttgccgttggtgaaagtttacctgagatctgtacagaaccacaacaac
aaggctgtaaacgaggcactaaataatctcttcatcacagaggaggattatctggctctg
cgcacatccatcgatgcctacgacaacttcgacaacatatctctggctcagagcctggag
aagcatgaactcatcgagttcaggcgaatcgccgcctacctgttcaaaggcaacaaccgc
tggaagcagagcgtggagctctgcaagaaagacaaactctacaaggacgcgatgcagtac
gcttcagagtcaaaggacacagagctggccgaggagctgctgcagtggttcttgcaggat
gacaagaaagagtgttttgccgcctgcctgttcacctgttacgacctgctgaggcctgac
gtggtgctggagacagcgtggagacacaacctcatggacttctccatgccctacttcatc
caggtcatgagggagtacctctccaaggttgatgcaattaaggaaaaggttgataagttg
gatgcttcagagtctttgaggaaagaggaagaacagctcacggaggcacaacccattgtc
tatggcacaccccagctgatgctcactgcaggtcccaatgtcgcagtacccccacagcag
ccttacggctacggataccccacggcacctggctacggccaacccgcacagccaggcttc
ggctatggcatgtaa
DBGET
integrated database retrieval system
