Rhinichthys klamathensis goyatoka (western speckled dace): 130077850
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Entry
130077850 CDS
T09701
Symbol
cltcb
Name
(RefSeq) clathrin, heavy chain b (Hc) isoform X1
KO
K04646
clathrin heavy chain
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04142
Lysosome biogenesis
rkg04144
Endocytosis
rkg05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130077850 (cltcb)
04142 Lysosome biogenesis
130077850 (cltcb)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
130077850 (cltcb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130077850 (cltcb)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rkg04147
]
130077850 (cltcb)
Membrane trafficking [BR:
rkg04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
130077850 (cltcb)
Exosome [BR:
rkg04147
]
Exosomal proteins
Proteins found in most exosomes
130077850 (cltcb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Ig_TRAPPC10_3rd
Motif
Other DBs
NCBI-GeneID:
130077850
NCBI-ProteinID:
XP_056099183
LinkDB
All DBs
Position
Unknown
AA seq
1684 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPNT
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTEDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAGFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISSKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNNLFASGSYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPTESPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPFY
DSRVVGKYCEKRDPHLACVAYERGQCDQELIHVCNENSLFKSLSRYLVRRKDPELWASVL
LETNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
GQAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEYDNAIITMMN
HPADAWKESQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLIVLSPRLDHTRAVNFFS
KVKQLPLVKVYLRSVQNHNNKAVNEALNNLFITEEDYLALRTSIDAYDNFDNISLAQSLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLQWFLQD
DKKECFAACLFTCYDLLRPDVVLETAWRHNLMDFSMPYFIQVMREYLSKVDAIKEKVDKL
DASESLRKEEEQLTEAQPIVYGTPQLMLTAGPNVAVPPQQPYGYGYPTAPGYGQPAQPGF
GYGM
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatccttcctatccgcttccaggagcacctgcagctccagaacctgggcata
aacccagcaaatattgggtttagcacccttacgatggagtcagataagttcatctgcatc
cgggaaaaggtgggcgaacaggcccaggttgtgatcattgacatgagcgatcccaacact
cccatccgcaggcccatctctgcagatagtgccatcatgaacccagccagcaaagtcatt
gctcttaaagcggcaaaaacccttcagattttcaacattgaaatgaagagcaagatgaag
gcccacaccatgaccgaggatgttacattttggaagtggatctctctcaataccgtagca
cttgtgacagacaatgcggtctatcactggagtatggaaggagactcacagcctatcaaa
gtctttgaccgacattccagtttagcaggctgtcaaattattaactaccgcactgacgcc
aaacaaaaatggctacttttgattggaatttcagcacagcaaaaccgtgttgtgggcgca
atgcaactttactcagtggacagaaaggtgtcgcagccaatcgaaggccatgctgctgga
tttgctcagtttaaaatggagggaaatgctgaggaatccacacttttctgctttgctgtt
cggggacaagctggaggaaagttgcacattattgaggttggaacacctccgactgggaat
caaccttttccaaagaaagcagtcgatgtatttttccctccagaggctcagaatgatttt
ccagttgccatgcagataagctccaagcatgatgtagtctttctcatcaccaaatatggc
tacatccacttgtatgaccttgagacgggtacctgcatctacatgaacaggatcagtgga
gaaaccatttttgtcaccgccccccatgaagccacatctggaataattggcgtgaaccgg
aagggacaggtactgtctgtgtgcgtggaggaggaaaacatcatcccttacatcactaac
gtgctgcagaaccctgatctagccctcaggatggccgtccgcaacaatctggcaggtgcc
gaggagctcttcgctcgaaaattcaacaacctgtttgctagtggcagctactctgaagct
gccaaagttgctgccaatgcgccaaaggggattctgcgcaccccagacaccatccgtcgg
ttccagagtgttcctgcccagcctggtcagacttctcccctgctgcagtactttgggatt
ctgctggaccaaggccagctgaacaaatttgagtcattggagctttgcaggcccgtcctg
cagcaaggccgcaaacagctcctggagaaatggctgaaggaagacaagctggagtgttct
gaagaattgggtgatttggtgaagtctgtggatccaactcttgctcttagcgtttatctc
agagccaatgttcccaacaaagtgatccagtgttttgcagagaccgggcagttccagaaa
attgtactgtatgcaaaaaaggttggctacactccagactggatcttcctgttgaggaac
gtcatgcggatcagtccagaacaaggcctgcagttctcccaaatgctcgttcaagatgag
gaacctctggctgacatcactcagattgtggatgtgtttatggagtataacctgatccag
cagtgcacttctttcctgttggatgccctgaagaacaaccgccccaccgaaagtcctttg
cagactcgtctgttggagatgaacttgatgcatgccccacaggtggcagatgccatctta
gggaaccagatgttcactcactatgaccgggcccatgtggctcagctgtgtgagaaggca
ggtctgctgcagagagctctggagcactacactgacctgtatgacatcaaacgggccgtg
gttcacacccacctgctcaacccagagtggctggtgaacttctttggctctctgtctgtg
gaggactctctggagtgtctgagagccatgctatctgccaacatcaggcagaacctccag
atctgcgtccaggtggcctccaagtatcacgagcagctctccacccagtccctcacagag
ctttttgaatccttcaagagctttgagggtctgttctacttcctgggctccattgtgaat
ttcagccaggatccagaggttcacttcaaatacatccaggctgcctgtaaaactggtcaa
atcaaagaagtggagagaatctgtagagagagcaactgttacgatcctgagcgtgtgaag
aacttcctcaaggaagcaaaactaaccgaccagttgcctctcatcattgtgtgtgaccgc
tttgactttgtccacgacctcgtgctctacttgtaccgcaacaacctgcagaagtacatc
gagatctacgttcagaaggtgaaccccagccgtttacccgtggtgattggtggactgctg
gacgtggactgctctgaggacgtcattaagaaccttattctggtggtcagagggcagttc
tccactgatgagcttgtggccgaggtggagaaaagaaacagactgaagctgcttctgccg
tggttggaggcccgcattcacgagggctgtgaggaacctgctacccataatgctctggct
aagatttacatcgacagcaacaacaaccctgagcgcttcctcagagaaaaccccttctat
gatagccgcgtggtgggcaagtactgcgagaagagggacccccatctggcctgtgtggct
tatgagagaggacagtgtgaccaagagctcatccatgtttgcaatgagaactcactcttc
aagagtctgtcccgataccttgtgcgtcgtaaggaccccgagctgtgggctagtgtgctt
ctggaaaccaacccttacaggagacccctaatcgatcaggttgtgcagactgcactttct
gagacccaggaccctgaggaagtctctgttactgtcaaagctttcatgactgctgaccta
cccaatgaactcattgagctcctggagaaaatcgtcctggacaactccgttttcagcgaa
caccggaacctgcagaacctcctgatcctgacggccatcaaagctgaccgcacacgtgtc
atggagtacatcaaccgcctcgacaactacgacgccccggacatcgctaacatcgccatt
agcaatgagctcttcgaggaggcttttgcgatcttcaggaagttcgatgtgaacacatca
gcagtgcaggttcttatcgagcacattgggaatctggaccgggcctatgagtttgctgag
cgctgtaatgagccggccgtgtggagtcagctggctaaagcacagctgcaaaaggggctg
gtgaaagaggccattgactcttacatcaaagctgacgatccctcagcctacatggaagtg
ggacaagctgcagcccaaagtgggaactgggaggatctggtcaagtttctgcagatggct
cgtaagaaggcccgagaatcttacgtagagaccgagctgatctttgccttggccaagact
aaccgtctagctgaactggaggagtttatcaatgggccaaacaacgcacacattcaacaa
gttggtgaccgatgctatgatgagaagatgtacgatgcagctaaactactttataacaat
gtatctaacttcgggcgtctggcctccactctggtgcatcttggggagtatcaggctgct
gtcgatggggcccgcaaagccaacagcacgaggacctggaaagaggtttgctttgcctgt
gttgacgggaaggagtttcgtctggctcagatgtgtggattacatattgtcgttcatgct
gatgaacttgaggagctcatcaactactaccaggaccgtggctatttcgaggagctgatc
accatgctggaggcggcgctgggcttggagcgcgctcacatgggcatgttcacagaactg
gccatcctctactctaaattcaaaccgcaaaagatgagggagcacctggagctcttctgg
tccagagttaacattcccaaggttttgagggcagctgagcaggctcacctgtggggcgaa
ctagtattcctgtatgataaatatgaggagtatgataatgctatcatcaccatgatgaac
catcctgcagatgcctggaaggagagccagttcaaggacatcataaccaaggtggctaac
gttgagctgtattacaaagccgtccagttttacctggagtttaaaccgctgttactgaac
gacctgttgatcgtactgtccccacgtcttgaccacactcgtgccgtcaatttcttcagc
aaggtcaagcagttgccgttggtgaaagtttacctgagatctgtacagaaccacaacaac
aaggctgtaaacgaggcactaaataatctcttcatcacagaggaggattatctggctctg
cgcacatccatcgatgcctacgacaacttcgacaacatatctctggctcagagcctggag
aagcatgaactcatcgagttcaggcgaatcgccgcctacctgttcaaaggcaacaaccgc
tggaagcagagcgtggagctctgcaagaaagacaaactctacaaggacgcgatgcagtac
gcttcagagtcaaaggacacagagctggccgaggagctgctgcagtggttcttgcaggat
gacaagaaagagtgttttgccgcctgcctgttcacctgttacgacctgctgaggcctgac
gtggtgctggagacagcgtggagacacaacctcatggacttctccatgccctacttcatc
caggtcatgagggagtacctctccaaggttgatgcaattaaggaaaaggttgataagttg
gatgcttcagagtctttgaggaaagaggaagaacagctcacggaggcacaacccattgtc
tatggcacaccccagctgatgctcactgcaggtcccaatgtcgcagtacccccacagcag
ccttacggctacggataccccacggcacctggctacggccaacccgcacagccaggcttc
ggctatggcatgtaa
DBGET
integrated database retrieval system
