Rhinichthys klamathensis goyatoka (western speckled dace): 130077859
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Entry
130077859 CDS
T09701
Symbol
synrg
Name
(RefSeq) synergin gamma isoform X1
KO
K25219
synergin gamma
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130077859 (synrg)
Membrane trafficking [BR:
rkg04131
]
Endosome - Golgi transport
Others
Aftiphilin/p200/gamma-synergin complex
130077859 (synrg)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EH
Motif
Other DBs
NCBI-GeneID:
130077859
NCBI-ProteinID:
XP_056099218
LinkDB
All DBs
Position
Unknown
AA seq
1415 aa
AA seq
DB search
MALRPGTGGGGSFMYPVGGGIGPPQGMMPMQQQQQQGFPMVQVMQPNMQGMMGMNFGAQM
PGAMPIQGGMAMGMQTPGMQFMGQPQFMGMRGPGPQFPVDIQKQMAEEHQKRLEQQQRML
EEDRKRRQFEEQKQKLRLLSSVKPKTGEKSRDDALEAIKGNLDGFSRDAKMHPTPSSQSK
KPDSSPSHTSVTSHSLPPAFPDDDDEFSDFVQVNNNFVDASSSFPTSSLPPSSPSLRAAQ
VSQPLELGPGQHPPSSPLPHTVPSSLSVSPVIQHSSVISSSQTAFQGPSLEEKMFSSCDL
TSGKKAQVSFKPRQALSELSPRAQVTAQFHSSTRSRNWAQTQDDFNSAFMTGMPPEPLAA
AQSPPAADSPPVQPTNVRGVGVYPQQDMQPMVPAWLYNDSLIPELFKKVLDFTMTPAGID
TAKLYPILISSGLPREALGQIWALANRTTPGKLTKEELYTVLALIGVAQSGLTVMSLDIL
GQFPSPPVPNLPAMAMAINAVLPQHQQPIMTQPPVSMAMPVTAPPVMGMTPNPAAQPPAT
FITNFPPVQATKPDDDDFQDFQEAPKAGAGDDSFTDFQGETGGAFPSMKSSSQSCVPAML
TPVSGSSSSSSSDKYAVFKQLSVEQPAEPTAPVSDSGDKYSVFRELEKPSDRKTVGEGFA
DFKSVSADDGFTDFKTADAVSPLDPPDQAKFQTTFPPPFTSSQSLSHSQPSSLAQPRNLL
NMADLDLFTTMAPPAPTSTADSKLNLFPSAPPSLVLPSTVAKPPSVVGDDFGDFALFGSS
SSSEVAPATSVAGRGAGTVVQDDFADFMAFGSSRDQKSEADSGDCGGESQAETSQQRQQI
GGDKYDVFKQLSLEGGLAYDDNKESGGGSFSSLKSDNDDFADFQSSKFCTALGASDKSLV
DKVAAFKQAKEDSASVKSLDLPSIGGSSVGKEDSEDTLSVQLDMKLSDMGGDLKHVMSDS
SLDLPGLSSHQPPAAESDDLKFDPFGTSAVSSLGSYDWSDKDDLPSGQGKKLQGESQGGL
PSSAVVHRKETSFGSSENITHTTVAKVTTFPIEDGGSTAENRFEAFADFGSIEQAQDDDD
DFGDFASTVSEKSDSLPGITEAESNQGEMTDDFGAFQGDKPKFGKSDFLKASTQAKVKSS
EEMIKNELATFDLSVQGSHKRSHSLGEKEIVRSIPSPAPEQPFRDRSNTLNEKPALPIIR
DKYKDLTGEVEESERYAYEWQRCLESALQVINTANNTLNSISSSTVCTEVIQSAQGMEYL
LGVVEVYRVTKRVELGIKATAVCSEKLQELLKDISRVWNNLMGFMSLANLTPDESSLDFS
SCILRHGIKNAKELACGVCLLNVDSRSKKKNENTFGRLFKRALTKDSRSKLRAFNSETDN
FKLMYGGHQYHASCANFWINCVEPKPPGLILPDLL
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttcggcccggaacagggggaggcggcagttttatgtaccctgtaggagggggt
attggaccaccgcaaggaatgatgcccatgcagcagcaacagcagcagggcttccccatg
gtccaggtcatgcagcccaacatgcaaggcatgatgggaatgaattttggagcacagatg
cctggtgccatgccaatacagggcgggatggcaatgggaatgcagactcccgggatgcag
ttcatgggtcagcctcagttcatgggcatgaggggcccggggccacagttccctgtggac
attcagaagcagatggcggaggagcatcaaaaacgtctggagcagcagcagcggatgctg
gaggaggatcgaaagagaagacagtttgaggagcagaaacagaaactgcgtctactgagc
agcgtcaaacccaaaactggggagaagagtcgtgacgatgccttagaggccatcaaagga
aatctggatgggttcagcagggatgccaagatgcatccaacaccgtcttcacagtctaag
aaaccagactcatcgccatctcatacctctgtcacctctcactcgcttcctcctgctttc
cccgatgacgacgatgagtttagtgactttgtgcaagtcaacaacaactttgttgatgcc
tcctcttctttccccacttcatccctccctccatcctccccttcactaagagccgctcaa
gttagccagccattagagttggggcctggccagcatcccccttcctctcctcttcctcac
actgtcccttcatctctctctgtctcgcctgtcatccaacactcttctgtcatctccagc
tcccaaactgcattccaaggcccttctctggaggagaagatgttctcatcatgcgatttg
acatctggtaagaaggcccaggttagttttaagccacgacaggctctgtctgagctgagt
ccgagagctcaggtcacagcccagtttcacagcagtaccagatcccgaaactgggcccaa
acccaagatgacttcaattcagccttcatgacagggatgcctcctgagcctctcgccgca
gctcagtcgccccctgcggcagacagcccgcccgtccagcccactaatgtcaggggcgta
ggcgtctacccccaacaagacatgcaacccatggtgccagcctggttgtacaatgactcg
ctcatcccagagttgttcaagaaggtccttgacttcaccatgacaccagcaggcattgac
acagccaaactctacccaattctgatctcatcgggtctgccacgagaagcacttggacag
atctgggccttggccaaccgaaccacacctggcaagctgaccaaggaagagctgtacacc
gtactggctttgattggagtcgcccagagtggtctcacagtcatgagtttggacatcctg
ggtcagttcccctcaccgcctgtgcccaatctacccgccatggctatggccattaatgct
gtcctgcctcagcaccagcagcccatcatgacccagccgcccgtgtccatggccatgcct
gtcactgcgccacctgtcatgggaatgacccctaacccggctgcacaaccaccagccact
ttcatcaccaacttccctccagttcaggctaccaagcctgatgacgatgatttccaggac
ttccaggaagcccccaaagctggagctggagatgactcattcacagatttccaaggagag
acagggggagcgttccccagcatgaaatcatcatcccagagctgtgttcctgccatgttg
actccagtgtcaggatcttcatcctcctcctcctctgataaatatgcagtgttcaaacag
ctgtcagtggagcagcctgcagagcccacagctcctgtctcagattcaggggacaaatac
agtgttttcagagagcttgagaagccttcagacagaaaaacagttggggagggatttgct
gatttcaagtctgtcagtgccgacgatggctttacagactttaaaacggccgacgccgtc
tctccactagacccaccagaccaagccaagttccagacaacttttcctcctcctttcact
tcttctcagtctctgtctcattcgcagccatcctctctggctcaacctagaaatcttctc
aacatggcagacctggacctcttcacgacaatggctcctcctgctcccacttccactgcc
gactccaaactcaatctgttcccttcagcacctccatccctagtattgccctccacagtt
gcgaaacctcccagtgtagtgggtgatgactttggcgattttgccctttttggctcctca
tcatcctctgaagtagctcctgccacctctgtagcaggtagaggagccgggacagtggtt
caggacgactttgctgacttcatggcattcgggagctcaagagatcagaaaagtgaggcc
gactctggagactgtggcggcgagagccaggcagagacgtcccagcagcggcaacaaatt
ggcggcgataagtatgacgtcttcaagcagctttcacttgaaggtggcctggcctacgac
gataacaaagaaagtggtgggggctccttctcgtcgctcaagagtgacaatgacgacttt
gcggatttccagtcctccaaattctgtacggcgctgggcgcgtctgacaagagcctggtg
gacaaagtggccgccttcaagcaggccaaagaggactctgcctctgtgaagtccctggac
ctcccatccatcgggggcagcagcgtggggaaggaggactcggaggatacactctcagta
cagctagacatgaagttatcagacatgggtggagacctgaagcatgtgatgtctgatagc
tccctagatctccctggtttgtcgtcgcatcaacccccagctgcagagtctgatgattta
aaatttgacccctttggcacatctgccgtcagcagtctgggcagctatgactggtccgac
aaggacgatctcccatctggtcaaggaaagaagctccagggagagtctcaaggtggactg
ccatcctcagctgttgtccataggaaagagacatctttcgggagctctgagaacatcacc
cacaccacagttgccaaggtgaccaccttcccaatcgaagacggtggctccaccgctgaa
aaccggttcgaagccttcgctgactttggctccattgaacaggcccaagatgacgacgac
gactttggcgactttgccagcacggtttctgagaaatccgactcccttcctggaatcaca
gaagcagagagcaaccagggcgaaatgacagatgactttggagccttccaaggagacaag
cccaaatttggcaagtcagatttcttgaaggccagcacacaggccaaggtcaaatccagc
gaagaaatgatcaagaacgaactcgccacctttgacttgtccgtgcagggttctcataag
cgtagccacagtctgggagagaaagaaattgtacggtccatcccctctcctgcccctgag
cagcccttcagagaccgctccaacaccctaaatgaaaaaccagcgctgccgatcatccgt
gacaagtacaaggacctcacaggagaggtggaggagagtgagcgatatgcgtacgaatgg
cagaggtgtttggagagcgctctgcaggtcatcaacactgctaataacacccttaatagc
atcagcagttccacagtgtgcacagaggtcatccagtcagcacaggggatggagtacctc
ctgggtgtggtggaggtgtatcgcgtaaccaagcgtgtggagctgggtatcaaagccacg
gccgtttgttcggagaaactacaggagctacttaaagacatcagccgtgtgtggaacaac
ctgatgggcttcatgtcgctggcaaacctcactcccgacgagagctcactggacttctcc
tcctgtatattgaggcacggcattaagaatgccaaagaactggcgtgcggagtgtgtctg
ctcaacgtggactcgcgcagcaagaagaaaaacgagaacacttttggacgcctgtttaaa
agagcactgacaaaagacagtcgctccaaattaagggcctttaattctgagacggacaac
ttcaagctcatgtacggaggtcaccagtaccacgccagctgcgctaacttctggatcaac
tgcgtggaacccaaaccgccgggtctcatcctgcccgacctgctctag
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