KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130077865
Entry
130077865         CDS       T09701                                 
Symbol
snai1b
Name
(RefSeq) snail family zinc finger 1b
  KO
K05707  snail 1
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04520  Adherens junction
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    130077865 (snai1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rkg03000]
    130077865 (snai1b)
Transcription factors [BR:rkg03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 Snail
    130077865 (snai1b)
SSDB
Motif
Pfam: zf-C2H2 zf-C2H2_4 zf-H2C2_2 zf-C2H2_jaz zf-met C2CH-3rd_BIRD-IDD zf-C2H2_6 zf-C2HE Zf-C2H2_ZNF451_1st zf-Di19 Zf-C2H2_ZNF451_6th zf-C2H2_15 Teflon_C zf-C2H2_ZNF462_1st Zf-C2H2_ZNF451_C DUF7410 zf-ZTF-17_C2H2_2 Zn_ribbon_Elf1 zf-C2H2_7th_ZNF462
Other DBs
NCBI-GeneID: 130077865
NCBI-ProteinID: XP_056099234
LinkDB
Position
Unknown
AA seq 256 aa
MPRSFLVKKYFSNKKPNYSELESQTDQRYAVVPLHDFHTIEGDSVVPILVWASSVLPLAF
SPASPSPPSPPGPLDLSSPSSSSSSGEEDDCRTSDPPSPDPDSDRSQCSQCGKPCGSAAG
LSRHQLTHCTPGPQTTGAASTATRAAFHCKHCPKEYTSLGALKMHIRSHTLPCVCGTCGK
AFSRPWLLRGHIRTHTGERPFSCPHCNRAFADRSNLRAHLQTHSEVKKYQCGTCSRTFSR
MSLLHKHTLSGCCPSA
NT seq 771 nt   +upstreamnt  +downstreamnt
atgcctcgttcatttcttgtcaagaagtatttctccaacaagaagccaaactacagtgaa
ctggagagtcaaactgaccaacgctatgctgtcgtccctctacatgacttccacaccatt
gaaggtgattctgtggtgcccatactcgtgtgggccagcagtgtgttacccctcgccttc
tccccggcctcccccagccccccgtctcctcccgggcctctggacctgagctctccgtcc
agcagctccagcagtggagaggaggacgactgccgcacctccgacccacccagcccggac
cctgactccgaccgctcccagtgctcccagtgcgggaagccctgcggcagcgcggccggc
ctgtcccgccaccagctcacgcactgcacccccggcccgcagaccacaggagccgccagc
accgccaccagagccgcctttcactgcaagcactgtcccaaagagtacaccagtctgggt
gcgctgaagatgcacatccgctcacacacactcccctgtgtgtgtggcacgtgtgggaag
gccttctccagaccctggctgctgcggggacacattcgcacacacaccggcgagcgcccc
ttctcgtgcccccactgtaaccgtgcgtttgcggaccgctcgaacctgcgggctcacctg
cagacccactccgaagtgaagaagtaccagtgtgggacgtgctcccgtaccttcagccga
atgtccctcctgcacaaacacactctctccggctgctgtccgtctgcctag

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