KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130077868
Entry
130077868         CDS       T09701                                 
Symbol
wdr41
Name
(RefSeq) WD repeat-containing protein 41
  KO
K23610  WD repeat-containing protein 41
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    130077868 (wdr41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rkg04131]
    130077868 (wdr41)
Membrane trafficking [BR:rkg04131]
 Autophagy
  Other autophagy associated proteins
   Rab associated proteins
    130077868 (wdr41)
SSDB
Motif
Pfam: Beta-prop_WDR41 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40 Beta-prop_WDR5 Beta-prop_TEP1_2nd WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd WDR55 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_EML Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd EIF3I DSE1_N Beta-prop_WDR36-Utp21_2nd Beta-prop_IP5PC_F ASA1 CFAP251_N Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_KIB1-4 SHKBP1_KCTD3_C Beta-prop_SPT8 Beta-prop_DCAF12 CPSF_A Beta-prop_IFT140_1st PAC11 WD_LRWD1
Other DBs
NCBI-GeneID: 130077868
NCBI-ProteinID: XP_056099235
LinkDB
Position
Unknown
AA seq 450 aa
MLRWILGGREAQGTVEKSAALFIGEEQPKNCFTEMQVLKGHFDIVRFLVQIDDLRFASAG
DDGQVLIWNVETGDCLLELRGHTQQITAMTSYTIIRGGNTHTALITASSDRTLSLWDPDS
GNRVQNISDLQSSVKCLLVLGRLDVWLSGGNELCVWNRDFELKCKTVHHSDEGISAMLEL
PKNFIAAAMDKEIVIFKLNLSGSDIVVMAMRHLADHRDTIHSLININDGLFASGSHIGEL
IIWDSVDWTIQAYEHIVWEEPAVDNQSEVRLTQQKPIEKSIQHMSSDGEFIVAAVGSGLY
VYDVPMKSVVAYRKIAHDSNVLHTMLQKDGQLMSCSEDGSVRMWELQDLPLPAEPASSGF
FGMFGTFGRSSKQSCPPVTKLPEVPGLRSLQLNGDLIGHSGAVQMFLSFKEKGLVTCSTD
HLLIVWKDGEMQSQLRSLAVFQKLEENQEL
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgctgcgatggattctggggggtcgagaggcgcaggggacagtggagaagagcgcggcg
ctgttcattggggaggaacagcccaaaaactgtttcacggagatgcaggtgctgaaagga
cactttgacattgttcgatttctggtgcagattgatgacttaaggtttgcatctgctgga
gacgatggtcaggtgctgatttggaatgtcgagactggtgattgtttgttggagttgcgg
ggccatacgcagcagatcactgcaatgacatcatacaccatcatcagaggcggaaacaca
cacacagcgctcattacagcatcatcagaccgaacactcagtttatgggatccagattca
ggaaaccgagtgcagaatatatctgatctccagtcctctgtgaagtgtttgctggtgttg
ggtcgcttggacgtgtggctctcgggtggaaatgaactgtgtgtttggaacagagacttt
gagctgaagtgtaaaacggttcatcacagtgatgaaggaatctcagccatgctggagctt
cccaagaacttcattgcagctgccatggataaagagattgtgatttttaagttgaacctg
tcgggctcagacattgtggttatggccatgcgtcatctagccgaccatcgggacaccatc
cattctctcatcaacatcaacgacggcttgtttgcgagtggctctcacatcggtgagctc
atcatctgggattcagtggattggacgatccaggcttatgagcacattgtgtgggaggag
ccagcagtggacaaccaatcagaggtcagactgactcaacagaaacccatcgagaagtcc
attcaacacatgagctcagatggagagtttatcgtggcagctgtcggcagtggtctgtat
gtttatgatgtgccgatgaagagtgtggtggcgtacaggaagatcgcccatgattccaat
gtcttgcacaccatgctgcagaaggacgggcagttgatgtcgtgctcggaggacggcagt
gtgaggatgtgggagttacaggacctcccccttcctgccgaacccgcctcctcagggttt
tttggcatgtttggcacttttggcaggtccagtaagcagtcatgccctcctgtcacgaaa
ctcccagaagtccctggtctgcgctcgctgcaactgaacggggatctgattggtcactct
ggagctgtgcagatgttcctgagttttaaggagaagggtctggtcacctgctccacggat
cacctgctcatcgtgtggaaagatggagagatgcagtctcaactccgcagtctcgccgtc
ttccagaaactggaggaaaatcaggaactgtga

DBGET integrated database retrieval system