Rhinichthys klamathensis goyatoka (western speckled dace): 130078059
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Entry
130078059 CDS
T09701
Symbol
lama1
Name
(RefSeq) laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04510
Focal adhesion
rkg04512
ECM-receptor interaction
rkg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130078059 (lama1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130078059 (lama1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130078059 (lama1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
Laminin_EGF
Laminin_B
Laminin_N
Laminin_II
Laminin_I
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
130078059
NCBI-ProteinID:
XP_056099529
LinkDB
All DBs
Position
Unknown
AA seq
3080 aa
AA seq
DB search
MKMLWPMAVVFASLICGQAQQRGLFPAILNLASNAEISTNATCGEPLPEMYCKLVEHVPG
RRIRNPQCRLCDANSQNPKDQHPITNAIDGTNQWWQSPSIKNGRQFHWVTITLDLRQVFQ
VAYIIIKAANSPRPGNWVLERSLDGLDFQPWQYYAISDTECLTRYNVTPRLGPPTYKRDD
EVICTSYYSRLVPLEHGEIHTSLINGRPSADDLTPELLDFTSARFIRLRLQRIRTLNADL
MTLSYHDPREVDPIVTRRYYYSIKDVSVGGMCICYGHAQSCPWDPVTKKLKCVCEHNTCG
ESCNECCPGYHQEPWQPGTLSKGNTCEKCNCHNKADDCFYNQTVADLRLSLNTQGRFVGG
GVCVNCSQNTAGVNCQTCADGYYRPHQVSPYADSPCVECECDARGSASPVCIRDDDHANL
DTGLSAGQCVCKEGFAGEKCDRCAFGFRDFPQCTRCECNLDGSHNSDPCRECVCKDNVMG
SNCDLCKQGFYNLQASNPEGCTECFCFGVSDVCESSTWFTSSVVHRDAVLLRSPQSSSIF
TSQISDENLIVSNGSVSAGVPSLWSWAAPEPFLNNKLTSYGGFLNYSVAYDTSEENVDKT
LSSDFSVIIEGNGRTLRHTPSSRLLLNAHTEQLVSVPILPRAFTDAHSGRSVQRDELMTL
LADLAALRVRAQLEASAEGTLRLSGVSLGVADTHSGPAKLPLDVEQCECPWGYSGSSCEY
CIPGFYRVGGILFGGNCLQCECNDHASECDINGECLDCTHNTSGPHCDLCEPGFYGDASE
GTPDDCQRCSCPLTLESNNFSPTCALQRPGEVVCDQCPLGYAGHKCERCADGYYGDPTVP
GQRCSVCECNGNVDLSEAGHCDGLTGECVKCVSHTAGRHCERCQDGFYGDAVTHKNCQAC
GCYGNGSLSAVCNVITGQCECKANVVGQTCDRCQAGYHGINSGDGCRLCECNQSGSVSGS
CDEEGRCQCITGVTGDKCDRCQRGYYNFRENGCTPCDCAHTHGNCNAETGECICPPHTHG
LKCEECEEGHWGHDGVSGCKACDCSPVGSSSSQCDLLSAQCRCNTHFSGLKCDRCALGFR
NFPECTACDCDPAGTREEFCDGSLGVCGCEDHGQCSCKENVGGSGCDECKSGTFGLTAEN
PSGCSPCFCFGVSSVCEELSGLIRVPLVLGSAPPLLRVVSQSDQQGTLEGVYYSQQEMLL
DAAHLHSLSVLTGPYYWRLPPKYHGNKLLSYGGSLSFTIAFFALDGVGLANHEPQVLMRG
GHLRKLVIYTDAPAPQNGVRTEQEVPLTEHKWKYFNSVSDEAVSHADFMSVLSNVEYVLI
KASYGSGLQQSRISNISLEVSLDADDVPEGGAGGVARLVEACECPPGYAGLSCQECSPGY
YRQAVSELNMKGRDRPLIRPCVPCRCNNHSVSCDLETGQCLGCQHNTAGEHCHLCAAGHY
GKVQGSVSDCSLCACPLRGQSFSATCVLEGAGDFRCDRCEEGYEGRYCERCSVGYHGDPS
EPGGRCQVCRCNGTGSVHGVCDGHTGRCECKPGVRGHLCDQCEERHVLVSEQCVSCDDGC
TGLLLDDLDSLDGSVASLNLSGVIIAPYSQLMTLENQTREVKSLMSWDQSPDHHLTAGER
SLRHLSDDITDLQQQVQSVFDGSEAALLNSEEKLSLGKQLLELIRNTHSAITGLTEQVRS
VNVTMDADLDGVNDTFLMEEMNTTLERIRTVSLTHCSATAQRQLSSAVSVLRRVQEEIAH
PLVQNQFRLENISSTLGRFERQILQIQEIINTSESHNNQSRRLVEQIQTSLSQLTISSNN
VNNLNQEVETQVQEAQDLLSDALNIAENMDNGTDTLDEMKNHLEGWSVNLRKHVDTLVMD
LTKRDALQMVYRAEDHAQALSKQAQALNSSLSKVRSASVNATSVSQTNSNIRENIQMAGD
LAHTANHSASSALNLTSEHSLTAQGTRALQASGEIRDASGALDTLTAGLVFNVTEVTSRL
SRVRANVQNFTHLLPEALSVLRNLPNGSRDELLEARRRAEAVNATLQRALQRLEDYRVKL
DESFSAVESVNSSSRLIRDSEEAASAASSRLTEAHLKAERLFERLKPLQTLGETLSRNLS
DIRELINQARKQAASIKVAVSAERECVRAYRPEVTSSNFNTLTLTVKTSEPDNLLFYMGG
GAGEDFMALEMRNGKVSFLWDTGSGHTRLEYPGVQINNDKWHRINATRFGRHGTLSVQQT
DSDPLPAVKISASGSSTVMDVSGSTRVFVGGLGAQVKKPPAVRATQFRGCMGEAALNENN
IGLWNYAERQGECGGCFMSPRTEDTSFHFDGSGFSVVQKSLRSMSTSVVMFFRTLSPNGL
MLYLASNGTRDFLSVELVEGKVHLTFELGSGALTMTSNRTYNTGSWYRIALQRNKRKGHL
SVMAADNPSEREVMEAESPGLASDLNRSDLDPIYIGGLPASRPIRRQVVARSFVGCMKNV
EIARTNFDLLREAYGVKKGCVLKPIRSVSVFGSGFLEMPGVLLGSHTEIMSSFSSTRDHG
ILLAGFSRTAGRSRRQTPQPFLIVMLASGLVEVHVGVAEGGAVHKAVVQSQNGSFSDGQE
HSLVLQRNKRSISVLVDEQNPVVLKLGSSAEKALALGRLFFGGVPPGERAIAPGSSDSFY
GCIRNTAVDGTLLDLSGALHYEHVDMDSCLLEERPKRVLLPDDLEAEPTSDPSTRPLTPA
AELSALTPGSTSCAAPDQTHTIPESHQFGLSRHSHMIMGFKNKTVRTSFVVKLSVRTFAH
SGLLFYMANANQQDYAVLQLQAGRLLLSCDLGRGPASATIPAGISDGLWHTVKAEFSKKS
VMVSVDGTDSDRISTKGHTLDVEGKLYLGGIPSTYTAKRIGNVTHSLAACLQDVTLNGVR
MDLNGPLVADGTSSCFRGAQDGTFFSGSGYAAFMKEGYNVGSDVTVSLDFRSTAPDGILL
GISSTKVDAIGLELINGQVVFSVNNGAGRISASSRSSGSMCDGRWRTLVANKQKHSLSLT
VDGVTVTVENPYSSSTSAETKNPIYVGGHPAEVKQNCLRTRESFRGCMKNLRVFKGHVTD
VLDFSAAFTHTHVFPHSCPA
NT seq
9243 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgctgtggccgatggctgtggttttcgcatcactgatctgcggtcaggctcag
cagagaggtctgtttcccgctatcctgaacctcgccagcaatgccgagatctccaccaac
gcgacctgtggcgaaccccttcccgagatgtactgtaaactagtggagcacgttcccgga
agacgaatccgtaaccctcagtgtcggctctgtgacgcaaacagccagaatcccaaagac
caacatcccattacgaacgccatcgacggcactaaccagtggtggcagagcccgagcatc
aagaacgggcgtcagttccactgggtcacgatcacgctggacttacgacaggtcttccag
gtcgcctacatcatcatcaaggcggcgaactccccgcggcccgggaactgggttctggag
cgctctctggacgggctggacttccagccgtggcaatattacgccatcagcgacaccgag
tgtctgacccgctacaacgtcacgccgcgcctcggcccgcccacgtacaagagggacgac
gaggtcatctgcacatcttactactcacgactggtgccgctggagcacggagagatccac
acgtctctgattaacgggcgtcccagcgctgacgatctgactccagaactgctggacttc
acctcggctcggttcatacgcctgcgcctgcagaggatccggacgctcaacgccgacctc
atgaccctcagctaccacgacccccgagaagtcgaccccatcgtcacgcgccggtattat
tactccatcaaggacgtctcggtgggcgggatgtgcatctgttatggccacgcccagagc
tgcccatgggaccccgttaccaagaaactgaagtgtgtgtgtgagcacaacacttgtggt
gagagctgtaatgagtgttgccctggataccatcaggagccgtggcaaccagggacgctt
tctaaaggaaacacatgcgagaagtgtaattgtcacaacaaggccgacgactgtttctac
aaccagacggtggcggatctgaggctgagcttgaacacgcagggccggtttgtgggcgga
ggagtgtgtgtgaactgctcccagaacactgcgggagtgaactgccaaacctgtgcggac
ggatactacagaccacaccaggtgtctccgtacgccgacagcccgtgtgttgagtgcgag
tgtgacgcgagaggttcagcgagccccgtgtgcatcagagacgatgatcacgcgaacctc
gacacaggtctgtctgcaggtcagtgtgtgtgtaaggagggttttgcgggcgagaagtgt
gaccgctgtgcgtttggcttcagagatttcccacaatgcactcgctgcgagtgtaacctg
gacggaagccacaacagcgacccctgcagggagtgtgtgtgcaaggataacgtgatgggc
tcgaactgtgatctgtgtaagcagggtttctataacctgcaggccagtaatcccgagggc
tgcaccgagtgtttctgtttcggagtgtcagacgtgtgcgagagctcgacctggttcacc
agctcggtggttcacagagacgcggttctccttcggtctcctcagagctccagcatcttc
acatctcagatctcagacgaaaacctgatcgtgtcgaacggctcggtgtcggccggcgtc
ccgtcgctgtggtcgtgggccgcgccggagccgttcctcaacaacaagctgacgtcgtac
ggcggcttcttgaactacagcgttgcgtacgacacgtctgaggagaacgtggacaaaacg
ctgagctcagatttcagtgtaataattgagggtaacgggcgtacgctgagacacacgccg
tcctctcgtctgctcctgaacgctcacaccgagcagctcgtctcggtgccgattctcccg
cgcgcgttcaccgacgctcacagcggcaggagcgttcagcgggacgagctgatgacgctg
ctagcggacctcgccgcgctacgggttcgagctcagctggaggccagcgctgagggaacg
ctacggttgagtggcgtgtctctaggagtggcggacacacactccggtccggctaaactc
cctctggatgtggagcagtgcgagtgtccgtggggatattcaggatcgtcctgtgagtac
tgtattcccgggttttatcgggtcggtgggattctgttcggaggaaactgtcttcagtgt
gagtgtaacgatcacgccagcgagtgcgacatcaacggagagtgtctggactgcacacac
aacaccagcggaccgcactgcgatctctgcgagccgggcttctatggagacgccagtgag
ggaacgccagacgactgccagagatgctcctgtccactcacactggagtctaacaacttc
agccccacgtgtgcgcttcagcgtcccggagaggtcgtgtgtgatcagtgtccgctggga
tacgccggacacaagtgtgagaggtgtgcggacggttactatggcgacccgacggtgccg
ggccagcgctgctcggtgtgtgagtgcaacgggaacgtggacctgtctgaagcgggccac
tgcgacgggctcacgggcgagtgtgtgaagtgtgtgtctcacacggcgggccggcactgc
gagcgctgccaggacgggttctacggggacgccgtcacacacaaaaactgccaggcctgc
ggttgctatggtaacgggtctctgtccgccgtctgtaacgtgatcacgggtcagtgtgaa
tgtaaagccaacgtcgtcggacaaacgtgtgaccgctgtcaggctggttatcatggtatt
aacagtggcgatggctgcagactgtgtgaatgtaaccaatcgggctctgtgtctgggtca
tgtgacgaggaggggcggtgccaatgcatcactggagtgaccggtgacaagtgtgatcga
tgtcagcgcggatattacaactttagagagaacggatgcacaccgtgtgactgcgcacac
acacacgggaactgtaacgcagagacgggcgagtgtatctgccctccacacacacacggg
ctgaagtgtgaagagtgtgaggaaggtcactggggtcacgacggcgtgtccggctgtaag
gcgtgtgactgcagtcctgtcggctcgagctcgtctcagtgtgatctgctgtcggctcag
tgtcgctgcaacacacacttctccggcctcaagtgtgaccgctgcgctttgggcttcaga
aacttcccagaatgcaccgcctgcgactgcgacccggccggcacgcgcgaggagttctgc
gatggctcactgggagtgtgtgggtgtgaggatcacggacagtgttcctgcaaggagaat
gtgggcggcagcggctgtgacgagtgcaagagcgggacgttcggtctgacggcggagaac
ccttccggctgcagtccgtgcttctgcttcggggtctccagtgtgtgtgaggagctgagc
ggcctgatccgagtgccgctggtgctgggttctgccccgccgctgctgcgtgtcgtgtct
cagagtgaccagcaggggacgctggagggcgtttattactcgcagcaggagatgctgttg
gacgcggctcacctgcacagtctgtcggtgctcaccggaccctactactggagactgccg
ccgaaataccacggtaacaagctgctgtcgtacggaggaagcctctccttcaccatcgcc
ttcttcgctctcgatggcgtcgggctggccaatcacgagcctcaggttctgatgaggggc
ggacacctgcgcaagctagtcatctacaccgacgcccccgcgccgcagaacggcgtccgc
accgaacaagaagttcctctgaccgagcacaagtggaagtatttcaactcagtgtcggat
gaagccgtgagccacgccgacttcatgtctgtgctgagtaacgtggagtacgtcctcatc
aaagcctcgtacggctccggactgcagcagagccggatctctaatatctctctggaagtg
tctctggatgcggatgacgttcccgagggaggagccggaggagtggctcgactggtggag
gcgtgcgagtgtccaccgggatacgccgggctctcgtgtcaggagtgttctccgggttat
taccggcaggccgtgtcggagctcaacatgaagggccgagaccggccgctgatccggccc
tgtgtcccgtgccggtgcaacaaccacagtgtgtcatgtgacctggagacgggccaatgt
ctggggtgccagcacaacaccgcaggagagcactgtcacctgtgcgccgcagggcattat
gggaaggttcagggttcggtcagcgactgctcgctgtgtgcctgtccactgcggggtcaa
agcttcagcgccacgtgtgtgttagagggcgctggagatttccgctgcgaccgctgtgag
gagggatacgagggccgctactgtgagaggtgttcggtgggttaccatggcgacccgtcg
gagccgggcggccggtgtcaggtgtgccggtgtaacgggaccgggtcggtgcacggcgtg
tgtgacggacacacggggcggtgcgagtgcaagcccggggtcagaggtcatctgtgtgac
cagtgtgaggagagacacgtgctggtcagcgagcagtgtgtgtcgtgtgatgacggatgc
acaggactgctgttggacgatctggactctctagacgggtcagtcgcgtctctaaacctg
tcgggtgtcatcatcgccccctacagccagctcatgaccctcgagaaccagacccgagag
gtcaagagtttgatgtcgtgggatcagagcccagatcatcacctgaccgcaggagagcga
agcttgagacacctgagcgatgacatcaccgacctgcagcaacaggtccagagtgtgttt
gatggcagtgaagcggcgctgctgaactctgaggagaaactctcgctgggcaaacagttg
ctggagctcatcaggaacactcactctgccatcaccggcctgacggagcaggttcgttct
gtgaacgtgacgatggacgctgatcttgatggcgtgaacgacacgttcctgatggaggag
atgaacacgacgctggagaggatcaggaccgtcagtctgacacactgcagtgcgactgcg
cagcgccaactcagttctgcagtgtctgttctgcggagggttcaggaggagattgcacat
ccgctcgtacagaaccagttcagactggagaacatctcctccaccctcgggagattcgag
cgtcagatcctgcagatccaggagatcataaacacgagcgagagccacaataaccagagc
cggcgcttggtggagcagatccagaccagcctgagtcagctcacgatctccagcaacaat
gtcaacaatctgaaccaggaagtagaaacacaagtgcaggaagctcaagacctgctgagt
gatgccctcaatatagcagaaaacatggacaacgggacggatactttggatgagatgaag
aaccatctggaaggctggagtgtgaatctcaggaagcatgtggacactttagtgatggat
ttgaccaaaagagacgccctacagatggtgtaccgggccgaggatcacgcgcaagccctc
agcaaacaggcacaagcccttaacagttctctatccaaggtcagatcggcatcagtgaac
gcaaccagcgtcagtcagaccaacagcaacatcagagaaaatattcagatggcgggagat
ctggctcacaccgccaatcacagtgcaagctccgccctcaatctgacgtcggagcactcg
ctcactgcgcaggggacgagggcgctccaggcgagcggggagattcgggacgccagcgga
gccctggacacactcactgcagggctggtgtttaacgtcactgaagtaactagcaggttg
agtcgagtgagagcgaatgttcagaacttcactcatctgctcccagaagccctcagtgtc
ctcagaaacctgccgaacggcagccgagacgagctcctcgaagcgaggcgacgggcagaa
gcggtgaacgcgactctacagagagcgctgcagcgactggaggattaccgtgtgaagctg
gacgagtcgttctctgcggtcgagtcggtgaacagcagcagccggctcatccgagactca
gaggaggccgccagcgcggcctcctctcggctgaccgaggctcacctgaaggcggagcgg
ctgttcgagcggctgaagcctctgcagactctgggagaaaccctgagcagaaacctgtcg
gacatcagagaactgatcaaccaggcccgcaaacaggcggcttcgattaaagtggcggtc
tctgccgagcgggagtgtgtgagagcgtaccgacccgaggtgacgtccagcaacttcaac
acactcacgctgaccgtgaagacctcagagccggacaacctgctcttctacatgggcggc
ggcgccggcgaggatttcatggcgttggaaatgcgtaacgggaaggtgtcgttcctctgg
gacactggatcaggacacaccagactggagtatcccggcgttcagatcaacaacgacaag
tggcaccggatcaatgcgacgcggttcgggagacacgggaccctcagtgtccagcagacg
gactcggatcctcttcccgcagtgaagatctcagcgtccggttcctccaccgtcatggac
gtcagcggatccacacgggtgttcgtcgggggactcggtgctcaggtcaagaaaccccca
gcggtgagagcgacccagttcagaggctgtatgggcgaagcggcgctcaacgagaacaac
atcggcttgtggaactacgcggagagacagggcgagtgtggcggctgcttcatgagtccc
cgcactgaggacacttcgttccacttcgacggcagcggcttctctgtggtccagaagtct
ctgcgctcgatgtccaccagcgtcgtcatgttcttcaggactctctctcccaacggcctg
atgctgtacctcgcctccaacggcacgagagactttctctccgtcgagctggtggaaggc
aaggttcacctgacctttgaactgggctcaggcgcactcaccatgacctcgaacagaaca
tacaacaccggatcctggtacagaatcgccctgcagaggaacaagcgcaaaggtcattta
tcggtgatggccgctgataacccgtccgagagagaggtcatggaggcggagtcaccaggt
ttggcctctgacctcaatcgctccgacctcgaccccatttacatcggtggattaccagcc
tctcgaccaatcaggaggcaggtcgtcgctcgctcttttgtcgggtgtatgaagaacgtt
gaaatcgctcgtacgaacttcgacctgctcagagaggcgtacggcgtgaagaaaggctgc
gtcctcaagcccatccgcagcgtgtctgtgttcggcagtggttttctggagatgcccggt
gttctcctgggttcccatacggagatcatgagcagcttctccagcacacgggatcacggg
atcctcctggcgggattcagccggaccgcgggacgctcgcgccgacagacgccacagccg
ttccttatcgtgatgctcgcgtccggattggtggaggtccatgtgggcgtggcagagggc
ggagccgtgcacaaagccgtcgtccaatcacagaacggctccttcagtgacggacaggag
cattcgctcgtactgcagaggaacaaaaggtcgatctcagtgctggtggacgagcagaac
ccggtggttctgaagctgggctcgtctgcagagaaagctctggctctgggccggctcttc
ttcggtggtgttcctccaggagaacgagctattgctccgggatcctccgactccttctac
ggctgcatcaggaacacagcagtggacggcacgttgctggatctgtccggcgcgctgcac
tacgagcacgtggacatggacagctgtttgctggaggagagacccaaacgtgtgcttcta
cctgacgacctggaggcggagccgacctctgacccctccacacgacccctgacccccgcg
gcagagctgagcgcgctcacaccgggcagcaccagctgcgcggccccggaccaaacacac
accatcccagaatcccaccagttcggactgtcccgacacagtcacatgatcatgggcttc
aagaataagaccgtcagaaccagtttcgtggtgaagctctccgtgcggacgttcgctcac
agcgggcttctgttctacatggctaacgctaaccagcaggattacgcggttctgcagctt
caggcgggccgtctgcttctgtcatgtgacctgggccgaggacccgccagcgccacgatc
cctgctggcatcagcgacggcctctggcacaccgtgaaggccgagttcagtaagaagtca
gtgatggtcagtgtggacggcaccgactccgaccgcatctccactaaaggacacacactc
gacgtcgaggggaagttgtacctcggaggaattccttccacatacacagccaagaggatc
ggaaacgtcacacacagtctggcggcgtgtcttcaggacgtgactctgaacggtgtgcgt
atggacctgaacgggccactggtggcggatgggacgagctcctgctttagaggcgctcag
gacgggaccttcttcagtggaagcggatacgcagctttcatgaaggagggctataacgtg
ggctcggacgtgacggtgagtctggacttccgctccacggctcccgacgggattttgttg
ggaatcagcagcacgaaagtggacgccatcggcctggagctgatcaacggacaggtggtg
ttcagcgtgaataacggcgcgggccggatctcagcgagcagcaggagcagcgggtccatg
tgtgacgggcgctggcggaccctggtggccaacaagcagaagcacagcttgagtctgacc
gtcgacggcgtgacggtgaccgtggagaacccgtactcgtcatccacatcggccgagaca
aaaaaccccatctatgtgggcggacatccagctgaggtgaagcagaactgtcttcgcacc
agagagtcgttccgcggttgcatgaagaacctgcgcgtcttcaagggtcacgtgactgac
gtcctggacttcagcgccgcgttcacacacacacatgtgtttcctcattcctgccctgca
taa
DBGET
integrated database retrieval system
