Rhinichthys klamathensis goyatoka (western speckled dace): 130078083
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Entry
130078083 CDS
T09701
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130078083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rkg03021
]
130078083
03036 Chromosome and associated proteins [BR:
rkg03036
]
130078083
Transcription machinery [BR:
rkg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130078083
Coactivators
SAGA/TFTC/STAGA complex
130078083
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
130078083
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
130078083
NCBI-ProteinID:
XP_056099547
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLGGQRDATRAQPENARPGSERQQQQQQQP
GGRAHVDSPSEPQQQTQQQNARKAARNPDSDPKDASMDKHPKALEKESPLKSHGSIIIIT
TAAASDGGSAPAPGNKGESPRDTRKKHPNARARRASASHSLNGAASASPSTSSPTITVAS
NPQAIALDRGTPTIALHRLPRHIIASIAQNGNGTSVSALVQQGARIGAAGAQVNHSKAPG
NNAKAASPPAAPAATPVKPAVSVSAAPGVRPAQPPAQQRLVTPQLIVRPPQQQTTIQLPP
GFTIPPGMVLVRTEMGQLVMVPQQALAQAQAQNSISPRPSTPTSTATFRVTTPQSPVSTQ
AIRPAPAAQTKLVQSSSPAQTSTATGPTKGPVAAGVAVTAPQQVQPAPGPQGSLTQMPLA
PQSAVAPAPGAPVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSRNVKALVQDLLDAK
IDPEEFTSRLQSELKSSPQPYLVPFLKKSLPALRLSLLNSQHSLTQPLQPNKSSVTPVQT
SVSVRPQQPNSTAVLPQGIKRAAGPGGQIRMPVVITQTVRATGTLGKPAGLQMGKSPVGV
SVQLSGNQKNRLTDPGGGSYRDDDDINDVASMAGVNLNEESARILATNSELVGTQIRSCK
DEAFLPTGLLHRRILETAKKFGVTDVPLEAVSFISHATQSRLRTVLEKVSSIAQNRMDSC
KEGEGYEQSSDVRSQLRFFEQLERMEKQRKDEREREILLRAAKVISQILSWRTLMTEKRK
LD
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccctctggaagacatgctcttctccgaggtggacgagaaagcc
gtgagcgatctagtgggctcgctggagtctcagcttgggggtcaacgcgacgcgacgcgc
gcgcagcccgagaacgcgcgcccgggcagcgagaggcagcagcagcagcagcagcaacca
ggaggaagagctcatgtagactctccatcagaaccacaacaacaaacacagcagcagaac
gcgaggaaagcggcgcgcaacccggattcagacccgaaagacgccagcatggataagcac
ccgaaagccctggagaaggagagtcctctgaagtctcacggcagcatcatcatcatcact
acggctgcagcctccgacgggggatccgctcctgcaccgggcaacaaaggtgagagcccg
agggacacccgcaagaaacacccgaacgcgcgcgcgcgacgcgcctcagcgtcccacagt
ctcaacggcgcagcatcagcatcacccagcacctccagcccgactatcaccgtggccagt
aacccgcaggcgatcgcgctggaccgcgggacgcccaccatcgcgctgcaccgactcccg
cggcacattatcgccagcatcgcgcagaatggaaacggaacgtcggtgtccgcgctggtc
cagcagggcgcgcggattggagcggcgggcgcgcaggtgaaccacagcaaagcaccgggg
aacaacgcgaaagccgcgtcgcctcccgccgcgcccgcagcaacgcctgtcaaacccgct
gtcagtgtcagtgctgctccgggcgtcagacccgcgcagccccctgcgcaacagaggctc
gtaacgccgcagctgatcgtcagaccaccgcaacaacaaactaccattcagctgccaccc
ggattcaccatcccgccaggtatggtgctggtccgcacagagatgggtcagctggtgatg
gttcctcaacaggctctggctcaagctcaggctcagaacagcatctcaccgagaccctcc
acacccaccagcacagccaccttcagggtcacgaccccacagtctcctgttagcactcag
gcgatccgtcccgctcccgcggctcaaactaaactggtccagtccagttcaccggcccag
accagcaccgcaaccggccccactaagggccccgtggcagccggcgtggcagtgacagct
ccccagcaggtccagccggccccgggcccccaggggtccctcactcagatgccactggcc
cctcagagcgcagtcgccccggcccccggagccccggtcgtctcccaggagatgcaggag
aacgtgaagaagtgcaagaacttcttagcgacgctcatcaagttggcatcccataattcc
ccttccccggagacgtctcgaaacgtgaaggcgctggtgcaggatctactggatgcaaag
atcgacccggaggagttcaccagccggctacagtccgagctcaagtcgtctccgcagcct
tacctggtccctttcctgaagaaaagtctccctgcgttgcgcctgtctctcctgaacagc
cagcactctctcactcaacctctccagcccaacaagagcagtgtgacaccggtccagacg
agtgtcagtgtccgtccacagcagcccaacagcaccgccgtcctgccgcaaggtataaag
agggcggcgggtcctggcggtcagatacggatgcctgtggtcatcacacagacggtgcga
gcgacaggtactttagggaagcctgcaggtctccagatgggcaagagccctgtgggcgtc
agcgttcagctctcaggaaaccagaagaaccggctgactgacccggggggcggctcgtac
agagacgatgatgacatcaatgatgtggcgtctatggccggcgtgaacctcaacgaagag
agcgctcgtattctagcgaccaactctgagctggtgggaacgcagatccgctcctgtaaa
gacgaggcgttcctgccgacgggtctgttacaccggcggatactggaaacagctaagaag
tttggagtgacggacgtaccgctggaggctgtgagcttcatctctcacgccacccagtcc
agattacgaacggtgctggagaaagtttcctccatcgcccagaacagaatggactcttgt
aaggaaggcgaggggtacgagcagtcgtctgatgtgcgctcgcagctcaggttttttgag
cagctggaacggatggagaagcagaggaaagatgagcgagagcgagagattctcctccgc
gcggcgaaggtaatctctcagatcctctcctggcgaacgctaatgacggagaagcgcaaa
ctggactaa
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integrated database retrieval system
