Rhinichthys klamathensis goyatoka (western speckled dace): 130078203
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Entry
130078203 CDS
T09701
Symbol
rnf34b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF34 isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130078203 (rnf34b)
Enzymes [BR:
rkg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
130078203 (rnf34b)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
130078203 (rnf34b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAP_RNF34_RFFL
RNF34L-like_3rd
zf-C3HC4_3
FYVE_CARP1-2
ARMET_C
SAP
HeH
Prok-RING_4
FYVE
zf-C3HC4_2
zf-RING_5
DUF7573
MGMT_N
Motif
Other DBs
NCBI-GeneID:
130078203
NCBI-ProteinID:
XP_056099705
LinkDB
All DBs
Position
Unknown
AA seq
398 aa
AA seq
DB search
MKAGASSMWASCCGLLNEVMGTGAVRTQQPGFGAGAGPFRFAPSAGYSTYPPSSTTSGSA
GLACKACGLAFSVFRRKHVCSDCKKSFCSLCSVLQENLRRCATCHLLWGTAFQRPRLMRL
RVKDLRQYLTLRNINTDTCREKEDLVDLVLCHLGAELEIGEDEEEEEVEEPEADTDSLPS
LPRSLSTPPASTARSSSQQSALSVAVSQGEALSRSDSSGTTNQEHGDAASVSLLNLEPHD
DILEASPATQRRARASLSDLSREDDIESLTVRQLKEILARNFVNFSGCCEKWELVERVHR
LYRENELNRRSMENVSNSLAAVIAYPPPICNGGIGDGVQIAQLGGVDENLCRICMDAVID
CVLLECGHMVTCTKCGKRMNECPICRQYVVRAVHVFKS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgggggcctcctccatgtgggcgtcatgttgcgggctgctgaatgaggtgatg
ggcacaggggcggtccgcacccagcagccaggctttggagccggagcagggccgttccgc
ttcgccccgagtgctggttactccacctacccacccagcagcaccacctcaggaagcgca
ggcctggcgtgcaaagcctgcggactggccttctctgtgttcagacgaaagcacgtttgc
tcggactgcaagaagagcttctgctcgctgtgttctgtgctgcaggaaaacctgcggcgc
tgcgccacctgccacctgctgtggggcacggccttccagcggcccaggctaatgcgactc
cgcgttaaagacctgcggcagtacctcacgctgcgaaacatcaacacggacacctgcagg
gagaaagaggacctggtggacctggtgctctgccatctgggtgccgagctggagatcggg
gaagatgaggaggaggaggaagtggaggagccggaagcggacacggacagtctgccatca
cttccgcgctctctctccacaccgcccgcttccacagcgcgctcctcctcccagcagtcg
gcgctgtccgtagccgtgtctcagggagaagctctcagtcgcagcgatagctcagggaca
accaatcaggaacatggagatgctgcatcagtttccctcctcaacctggagcctcatgac
gacatactggaggcgagcccagcgacgcagagacgcgcacgtgcctccctctcggacctg
tcccgcgaggacgacatcgagagcctgacggtgcggcagctgaaggagattctcgcccgc
aacttcgtcaacttttcaggctgctgtgagaaatgggagctggtggagcgcgtccatcgt
ctctacagagagaacgaactcaacagaagatccatggaaaatgttagcaacagccttgct
gcagtcatagcttacccacctcctatatgcaatggaggtattggagatggtgtgcaaata
gctcagctgggcggcgtggatgagaacctgtgccggatctgcatggatgccgtgatagac
tgcgttctgctggagtgcggtcacatggtcacctgcaccaagtgcggcaagaggatgaac
gagtgccccatctgcaggcagtatgtggtgcgggcggtgcacgtcttcaagtcttaa
DBGET
integrated database retrieval system
