Rhinichthys klamathensis goyatoka (western speckled dace): 130078209
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Entry
130078209 CDS
T09701
Symbol
dennd3a
Name
(RefSeq) DENN domain-containing protein 3 isoform X1
KO
K20162
DENN domain-containing protein 3
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130078209 (dennd3a)
Membrane trafficking [BR:
rkg04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
130078209 (dennd3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
dDENN
WDR90_beta-prop_4th
Beta-prop_LRRK2
Beta-prop_EML
uDENN
Beta-prop_HPS5
Beta-prop_TEP1_2nd
SPA
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
130078209
NCBI-ProteinID:
XP_056099709
LinkDB
All DBs
Position
Unknown
AA seq
1283 aa
AA seq
DB search
MADKNPSGLLEACVVAGVSNERLKELCLGKDVLVEAEVLQVHAPPFVTKDSSSNGVYQDH
APAFSRAQRRRSFKKRDRPVSTISESGNLSESAVAVSDDLSVPQNVDLIALQQLCFPDGL
RITNECGEDSYHFLVFTDVFGTQTHGVVAQFCKPIQFQQDNMMHKNGYQSTKLQRLYTTY
SICVISKYPYYNALRDCLSCFLLQLKTSRMTEFEEQVKEFSAKLALVPIPPPGPLHVVFN
LRPLQIELPSRLDVDRPVLDLDLHLPFLCFKPKQILQIISCILMEQRLVFLSTDWAKLTL
VAECFMIFIHPLRWQHPFVPVLSSQMLDFIMAPTAYLMGCHTHHFQEVAEEIDDLVLIDI
DQGTVSSSGSDRLNLPDVPLAARDCFIYRASALQLHYDLDLCHAGSRTDIHELRAHRRRW
QHTVNSVILNVSMELIVNIFSEVCEFLNYEHRVFNSEEFLRSRETTDHTFYKRVLDTHIF
HSFLRDRLNRKNDAFTRMQLNIRTETRRLRTMTESPRRPTMEEVNRKTFRLENGLNNRLG
KSMPNLADYRLLTAPVRQISVGTMPLQSGSWGPSRPIRTFNLPEFPPPLSYQYVQKYYVD
LIGQLSRAISMATPDDCALLARYYYLRGLVNSVAGRRVDALGDFQSLYKTDMDIFPAELL
NALVESLLADERKLAEQRPDLKRLISRVKKDNEREQARPMDGGTVKRFELPKKHLHMEDF
VRRVQESGIVKDLGTIQRLFEALTVGVEASSQSVFYLAVDGQQKQVDPEIFRFFYSFWKD
TEAAAQDVDLPAVALEHLESGECVYKLSSSVKTSHGVGKIAMTQRRLFLLTEGRPGYVEI
TKFRDIEDVKISSAPFLLLRIPSLKIKTSFRKESFEVNLKSECDLWHLMIKEMWAGRKMA
DDHKDPQFMEQALTNALLMDAVVGSLQSQKAIYAASKLAYFDKMKFEVPMMVPKTTSETL
KHKINPSLDQTSPQAVDVLLYTPGQLGVSELDGGANPKLWCALSDGKVLVFDAASWSMQQ
NSVQVGTSRLNCMLAVNQHQLWIGSKDSFIYIINPRSVSCNKQLTEHRGEVTGLTLEERT
DKFSQTVAYSCGEDGSVNVWDVSSLQVRRQFRVSCDRLQSIQIHNGMLWCCGRDCVMEVR
RNGTVHRKMSLPDHLLGSPRGFSSFLLFNESEQLWAGFADAGELCVWHCRNLNKPIIRIQ
LKDCAGVVCMIKVKSQIWVGCHGRSAAGKARGKIYVVNTDRYTVEKELVAHTDSVQTLCS
AEDRYVLSGAAQDDGKIGIWKVE
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaaaacccgtctggtctactggaggcgtgtgtggtggctggagtatcaaac
gaacgtctgaaggagttatgcctgggtaaagatgtgctggtggaggctgaggtgctgcag
gttcacgctccaccgtttgtgacgaaggacagttccagtaacggtgtttatcaggatcac
gctccggccttcagcagagcccagcggagacgctcctttaagaagagggaccgacccgtt
tcaaccatcagcgaatccggcaacctcagcgaatcagcagtggccgtctcagacgatctc
agcgtaccgcaaaacgtcgacctcatagccctgcagcagctctgcttcccagatggtttg
agaataaccaatgagtgcggagaagactcctatcatttcctggtgttcacggatgtgttc
gggacccagacacatggggttgtggctcagttctgcaaacctattcagttccaacaggat
aatatgatgcataaaaacggctatcagtcgaccaaactgcagcgtctgtacaccacatac
agcatatgtgtcatctccaaatatccatattataatgccctcagagactgtctgtcctgt
ttcttgctccagctgaagacctcccgcatgaccgagtttgaagagcaggtgaaggagttt
tccgccaaactggcactggttcccatcccgcctcccggacccctgcatgtggtgtttaat
ctcagaccccttcagattgaacttccctccagactggatgtggatcggcccgtcttggac
ctcgatcttcacctgccgtttctgtgtttcaaacccaagcagatcctgcagatcatcagc
tgtatcctgatggagcagaggctggtgttcctgtccaccgactgggccaaactcacgctc
gtcgccgaatgcttcatgatcttcatccacccgctgcgctggcagcatccgttcgtaccc
gtcctgtcctcccaaatgctggacttcatcatggctcccacggcctacctgatgggctgc
cacacacaccacttccaggaggtcgcagaggagattgatgatctggttcttatagacatt
gaccaaggaacagtgtcgtcttcgggttcagacagacttaatctcccagatgtgccactg
gcagccagagattgttttatataccgagccagtgcgcttcagcttcactatgatctggat
ctgtgtcacgccggcagccgaacggacatccacgagctgcgcgctcacaggagacggtgg
caacacacagtcaacagcgtcatcctgaacgtcagcatggagctcatcgtcaacatcttc
agtgaagtgtgtgaattcctgaactatgagcaccgtgttttcaacagcgaggagttcctc
cggtccagagagaccacagatcacacgttttacaaaagggttttagacactcatatattc
cactcatttctgcgggaccgtttgaacaggaagaatgacgcatttactcgcatgcagttg
aacatccgtacagagactcggaggttgaggaccatgacggagtctccacgcagacccacg
atggaggaggtcaaccgcaagaccttcagactagagaacggcctgaacaacaggctgggg
aagagtatgccaaacctggcggactaccgattgctcaccgccccggtccgacagatatca
gtcgggacgatgcctttacagagcggttcctggggtccctcaaggccaatcagaaccttt
aatctcccagaattccctcctccgctgtcctatcagtacgttcagaagtactacgttgat
ctcattggccagttgagcagagccatttccatggcgaccccagatgactgcgccctgctg
gcccgttactattaccttcgaggcctggtgaactcagtagccggcagacgcgtggacgcc
ctcggagacttccagagcttgtataagacagacatggacatctttccagccgagctgctg
aacgcactggttgagtcgctgctagcggacgagagaaagttggccgagcaacgccctgat
ttgaagcgtctgatcagccgggtgaaaaaagacaatgagcgtgagcaggcgcgaccgatg
gatggcgggacggtgaagagattcgaactgcccaagaaacacttgcacatggaggacttt
gtgcggcgcgttcaggagtccggcatcgttaaggatctgggaaccatccagaggctgttt
gaggcgctcactgttggtgtggaggcctcgtcccagtctgtattttaccttgccgtggac
ggccagcagaagcaggtggatcctgaaatcttccgcttcttctacagcttctggaaggac
actgaagctgcggctcaagacgtggacttgccggccgtcgcgctggaacacctggagagc
ggcgagtgtgtctacaagctctcgtcgtccgtgaagaccagccacggcgtgggaaagatc
gccatgacccagcgcaggctcttcctgctgaccgagggccggccgggatacgtcgagatc
accaaattcagagatattgaggatgtgaagatatcttctgctcctttccttctgctgagg
atcccgtcgctgaagatcaaaacgtccttcaggaaggagtcgttcgaggtcaacctgaag
tcggagtgtgacctctggcacctgatgatcaaagagatgtgggccgggaggaagatggcc
gacgatcataaggaccctcagttcatggagcaggccttgactaacgccctgctgatggac
gccgtggtcgggagcctgcagtcacagaaagccatctacgccgctagcaaactggcctac
ttcgacaagatgaagtttgaggtgcccatgatggtccccaaaacgacatctgagaccctc
aaacacaagattaacccgtctctggaccagacgtctcctcaagcggtggacgtcctgctc
tacacgcccggtcagctgggtgtgtcggagctggacggcggggcgaacccaaagctgtgg
tgtgctctgagcgatgggaaggtgctggtgttcgacgccgccagctggtccatgcagcag
aactctgttcaagtgggaacgtcccggctgaactgcatgcttgcagtgaaccagcatcag
ctgtggatcggctcaaaggattcgttcatttacatcataaacccgcggagcgtgtcgtgc
aataagcagctgacggagcatcgcggcgaggtcaccggactcaccctggaggagagaacc
gacaaattcagtcagacggtggcgtactcgtgcggggaagatggcagcgtgaacgtgtgg
gacgtgtcctctctgcaggtccgacggcagttcagagtctcctgtgacagactgcagtcc
atccagatccacaacggcatgctgtggtgctgtgggcgtgattgtgtgatggaagtgcgc
aggaacggcacggttcatcgtaagatgtctcttccagatcacctgctgggttcaccgagg
ggcttcagcagtttcctgctctttaatgagtcggagcagctgtgggccggtttcgcagac
gcaggcgagctgtgtgtgtggcactgcagaaacctgaacaaacccatcatcaggatccag
ctcaaagactgcgccggtgtcgtctgcatgatcaaagtcaagagtcagatctgggtgggt
tgtcacggccgcagcgccgcaggaaaagcccgcgggaagatctacgtggtgaacacggac
cgctacacggtggagaaggagctggtggcgcacaccgacagcgttcagacgctgtgctcg
gctgaggatcggtacgtgctcagcggagccgcgcaggacgacgggaaaatcggcatctgg
aaagttgagtag
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integrated database retrieval system
