Rhinichthys klamathensis goyatoka (western speckled dace): 130078213
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Entry
130078213 CDS
T09701
Symbol
npas4a
Name
(RefSeq) neuronal PAS domain-containing protein 4A
KO
K26457
neuronal PAS domain-containing protein 4
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130078213 (npas4a)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
130078213 (npas4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_11
PAS_3
HLH
SoxG
Motif
Other DBs
NCBI-GeneID:
130078213
NCBI-ProteinID:
XP_056099716
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MYRSTKGASKARRDQINAEIRNLKDLLPISDADKSRLSYLHIMSLACMYTRKSVFFSQDT
ASSAEATTGFLSFHELNELVQVMPGFLMLLTGEGKLLYLSDSVSEHLGHSMVDLVAQGDS
VYDIIDTADHFILRSNLVPPTSPDTDRLFRCRFNTSKSVRRQSAGNKLVLIRAHCLSETP
DESSPGSYWTSNPVWVCFCAPLEPHTSQGGIAPDREQSSAPTLESNFFLPCFRSQHSRDM
RLQEAQDSVNVYLGLNVEILQSQSWYSFLHPQDLSHASAQHCSLLREGGEGRAEMVVRVE
IADHSWVWLYMVLQLETGENPIVSNNYIISETEAWSIREQLSSEQTQLSLVLGSSTSQQE
SLSLQSPETLSSPDQVFTPGSSGLSGQSFDFSTAACSAGSTEEQGGSSSMEPVQLESGPR
SSLSSMEEESFFQHEPSEPVASPSSASSPIPVTVATVSDLDFLTQNILLPPAFQIDPPLP
ALPLPLPPVPTSQTEQTKEFVCTPPYTPQIGGSNFPFGEPHFSFDPTGATSPSPLAPTAT
VTTTTAPSLSPSEPSNPQGSTPPPTTTLSTLLPLTITSPTTDILFPVEPCTGSLYEKLPP
TPDSPGDGDCTVMTLPEVRGPLYVDVPHGPLPYPPEGLLTPEASPGKQPSLPFFSSLRER
EKERTEISLLAQHISTLAEGFYLDPFLAKLVPSTISERSQSPSLNSAGLDTVPLLGEFYT
LKSWKGLDLPIFSDDESLFEESILETLLQDLTSSPPLSPTHSYSSHSSPPSSPECWCPPL
HFDGISAVSAGHFCSVQSAHCNNEAGRGAMMTPVNADNMADGKAAGEVAMETEVASSPLF
MGIPTSPPLQLTASPASVPVSSPVSPAPPGLPCAQSLLEELAALEPIFGAGASIAPGLGQ
QPELYQLQCHAPQQCFRKDGSGSDPPF
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgtatcggtccacaaaaggagcttctaaagcccgaagggaccaaataaacgcggagatt
aggaacctgaaggacttgttacccatctccgatgcggacaagtctcggctgtcctatctt
cacatcatgtcgctggcttgcatgtacacgagaaagtctgtcttcttcagccaagataca
gctagcagtgctgaagcaaccacgggattcctctcatttcatgaactgaatgagttggtt
caagtcatgccaggttttctaatgctattgactggtgaaggaaagttactgtacctgtca
gacagtgtctcagaacaccttggacactcaatggtagatttggtcgctcaaggggacagt
gtgtacgacataatagacactgcagaccactttattttgaggagtaacctggtgcctcca
acttcacctgacacagatcgtctgttccgctgcagattcaacacctccaaatcagtgcgt
aggcagagtgcaggcaataagcttgttttaatccgagcccactgcctgtcagaaactccc
gatgagtcttccccaggatcttattggacttccaacccagtgtgggtatgtttctgtgct
cctctggagcctcacacttcccaagggggaattgccccggacagagaacaatcttcagct
ccaacactagagagcaacttcttcctgccatgtttccgttctcagcatagccgtgacatg
agacttcaggaagcacaagacagtgtgaatgtttatttgggactaaatgtggagattctg
cagtcccaatcttggtacagcttcctgcatcctcaggatctttcacacgcctcagctcag
cactgcagcctattgagagagggaggagagggcagagctgagatggtggttcgtgtagag
attgcagatcactcatgggtctggctttatatggtcttgcagctggaaactggggaaaac
cccattgtcagtaacaattacatcatcagtgagacagaggcttggtcaatcagggagcag
ctgagctctgaacagacccagctctccttggtgctgggttcaagtacttcccaacaagaa
agcctaagcttacagagtccagaaactctctcaagccctgatcaagtgttcacgccagga
agtagtggcctctctgggcagtcatttgacttcagcacggccgcatgcagtgcaggatct
actgaggaacaaggtggcagctcctcaatggagcctgtacaactggagagtggcccacgt
tccagtctctcctctatggaagaagagagcttcttccagcatgagccaagtgaacctgtg
gccagtccatcttctgcatcatctcccattccagtcacggttgcaacagtgtctgacttg
gacttcctcactcagaatattctgctaccaccggcattccagatagatcctcctctacca
gccttgccccttcctcttccacctgtacctacctcccagaccgaacagaccaaggagttt
gtgtgcacacccccatacacacctcaaataggtggaagcaattttcccttcggggagcct
catttcagcttcgatcctaccggtgccacctcaccatctcctcttgctccaactgcaaca
gtaacaacaacgacggctccatctctttctccatctgagccatcaaacccacaaggcagc
acaccacctccaacgacaacactctcgactcttttgccactcactataacatctccaacc
acagatatcctcttcccagtggagccttgcactgggtcgctctatgaaaaactccctcct
actcctgacagtccaggtgatggcgactgcacggtcatgactttaccagaagtccgtggt
ccactgtatgttgacgtcccccatgggccactcccttacccaccagaaggtctcctcaca
cctgaagcctcacctggaaaacagcccagcctgcccttcttctcctcactgcgtgagaga
gaaaaagagagaacggagatctcgcttttagcccagcacatcagcacactagcagagggc
ttctacttagatccattcctggccaagttggttccttccaccatttctgaacgctctcag
tctccgtctctgaattctgcaggacttgatacagtcccactgttgggtgaattctacaca
ctcaagtcctggaaaggcctggacctgcccatcttttctgatgatgagtctctgtttgaa
gagagtatattagagacccttctccaggacctcacatcctcccctcccctctcaccgact
cactcttactcctctcactccagccccccctcctctcctgagtgctggtgcccaccctta
cactttgacgggatctctgctgtgagtgctggtcacttctgtagcgtccaatcggcgcac
tgtaacaatgaggccgggcgaggggctatgatgacgccagtcaacgcagacaacatggca
gatgggaaggcggcaggcgaagttgcgatggagacagaggtagcatcatcgcctctattc
atgggcataccgacatctccaccactgcagctgaccgcctcccccgcttcggtgcctgtc
tcgtcgcctgtcagccctgcgccgcccggcctgccctgcgcccagtccctcctcgaggag
ctggccgccctggaacccatatttggggcaggtgcctcgatcgcccccggcctggggcaa
caacctgagttgtatcaactccaatgtcatgcaccgcaacagtgcttccgcaaagatggg
agtggaagtgatcctccgttctaa
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