Rhinichthys klamathensis goyatoka (western speckled dace): 130078273
Help
Entry
130078273 CDS
T09701
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide-gated channel rod photoreceptor subunit alpha-like
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
130078273
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rkg04040
]
130078273
Ion channels [BR:
rkg04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
130078273
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLZ
cNMP_binding
Ion_trans
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-GeneID:
130078273
NCBI-ProteinID:
XP_056099786
LinkDB
All DBs
Position
Unknown
AA seq
379 aa
AA seq
DB search
RISNLVMYIVIIIHWNACMYYSFSKAIGFGTDKFVYPDTTDPEFGRLVRKYAYSMYWSTL
TLTTIGETPPPVKNSEYFFVVTDFLVGVLIFATIVGNVGSMITNANAARADFQARIDAIK
QYMSFRKVTKELEKRVIKWFDFLWTNKKAVDEREVLKYLPDKLRAEIAINVHLDTLKKVR
IFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGIKQFVVL
SDGSYFGEISILNIKGSRAGNRRTANIRSIGYSDLFCLSKDDLMEALTEYPDAKAMLEEK
GRQILMKDNLLDLELAKQGPDPKDMEEKVLKISGVLDELQTRFARLLAQHEAAQGKLKKR
VTKLEQKISDSGGVEIPEP
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
cgaatctccaaccttgtgatgtacatcgtgatcatcatccactggaacgcctgcatgtat
tactcgttctccaaggccatcgggttcggaacggataagttcgtgtacccggacaccacg
gacccagagttcggtcggctagtgaggaaatacgcatatagcatgtactggtccacactg
acgctcaccactatcggtgaaactccaccgccagtcaagaactcagagtacttcttcgtg
gtcacggacttcctagtcggcgtcttgattttcgccaccatcgtcggtaacgtcggttcg
atgatcaccaacgcgaacgcggcacgcgcagatttccaagctcgcatcgacgccatcaaa
caatacatgagcttccgaaaggtcaccaaagaattggagaaacgagtcattaaatggttc
gatttcttgtggaccaacaagaaggcggtggatgagagagaagtcctgaagtacctgccg
gacaagctgcgggcggagatcgcgatcaacgtgcacctggacacactgaagaaggtgcgc
atcttcgcggactgcgaggccgggctcctggtggagctggtgctgaagctccagccgcag
gtctacagtcccggagactacatctgcaagaagggcgacatcggacgcgagatgtacatc
attaaagaagggaaacttgcagtggtggcggacgatggaatcaagcagtttgtggttctc
agcgacggaagctacttcggggagattagcatcctcaacatcaagggcagtcgcgcagga
aaccgcagaaccgctaacatacgcagcattggctactcagacctcttctgcctgtccaaa
gacgacctgatggaggcgctcaccgaatatcccgacgccaaggccatgctggaggagaag
ggtcggcaaatcctgatgaaggataatctcctggatctggagctggccaagcagggcccg
gacccgaaggacatggaggagaaggtgctgaagatcagcggtgttctggacgagctgcag
acccgcttcgcacgcctgctggcccaacacgaggcggctcagggcaagctgaagaagcgg
gtcactaaactggagcagaagatctcagactcaggaggagtggagatccctgagccatga
DBGET
integrated database retrieval system
