Rhinichthys klamathensis goyatoka (western speckled dace): 130078274
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Entry
130078274 CDS
T09701
Symbol
nfxl1
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K15683
NF-X1-type zinc finger protein NFXL1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130078274 (nfxl1)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
130078274 (nfxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-NF-X1
OrfB_IS605
Motif
Other DBs
NCBI-GeneID:
130078274
NCBI-ProteinID:
XP_056099787
LinkDB
All DBs
Position
Unknown
AA seq
882 aa
AA seq
DB search
MTCVVLGVVVMDPAWRQRGRGRGQGRGQVTCPPGPVRSEVRGVSSESRFEEIRKCDRAAA
QRLATEPCSSSSDDEDDDDDDDGKRGKIFQSALSPYTSHTGDTDVRLLEQTRHYLHDVCQ
SGGVTCLICIASVRRTQPVWSCVGCYCIFHITCIQKWAKDSIFLVSSVTDEDFGKKDHPW
PCPKCRYEYSPHQTPTRYHCYCGKEAEPAPDPWLLPHSCGQVCGREFKPSCGHRCLLLCH
PGPCPPCPQMVSVSCVCGKASRVPRRCSAKAWSCTQICRRTLPCRTHTCANTCHAGVCEA
CPRVSVQECVCGLRRAERPCASPEWHCDQVCGRLLSCGNHTCERVCHSGVCGGCPRAGNR
SCSCGKTKSVLPCTVDVPTCGDTCGKKLDCGLHTCSMRCHRAACETCRQEVEKTCRCGRY
TKLLPCHKEYLCESKCNKTRTCSRHQCKRKCCPGNCPACDMSCGRMLGCRNHRCPSVCHQ
GSCYPCPEMVEVRCDCGSTVISVPCGRERSTKPPRCKELCRKPALCHHGSLQEHRCHAGP
CPPCALACRRPRPGCAHLCPTPCHDQVLVKAADRALLAGPWEKPSTPAFVQKALPCPPCL
VPIPTACLGKHEVSPVPCHARGPFSCGRPCGRSLACGNHTCSLECHHVTSESDNAKAGPE
CVQCEEGCSKPRPSGCPHPCALPCHHGNCPPCVLMVRQRCHCRISNLYIECVKFTTADKQ
SKQLLTSCQNQCPKQLRCGHRCKLQCHTGECDQSCSQRVKIKCPCKRIKKDFPCSRAKNE
LLTCDETCGELQKKHAEACAAEERAALEGEMRKQQAELEAFEKRQKGRRKKSRKVSEVET
EEGAWHRYKLRLLMPICGFLLAVAAFYLLQLTNEAPDGENGQ
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgtgttgttttaggggtcgttgtcatggatccggcctggaggcagcggggtcga
gggcggggtcagggcagaggtcaggtcacgtgtcctcccgggccggtgaggtcagaggtc
agaggcgtgtcgtctgagtcccgattcgaggagatcaggaagtgtgaccgggccgccgct
cagcgattggctactgagccgtgcagctcttcctctgatgatgaagatgatgatgatgat
gatgatgggaagcgagggaaaatctttcagtcggctctgtctccgtacacgtctcacaca
ggtgacactgatgtccgtcttctggagcagacaagacattatttacatgatgtgtgtcag
tctggaggagtcacatgtctcatctgcattgcttctgtcaggaggacacagccagtgtgg
agttgcgtcggctgctactgtattttccacatcacctgcatccagaaatgggccaaagac
tcgatcttcctggtgtcttcagtgacggacgaggactttggcaaaaaagatcatccgtgg
ccatgtccgaagtgcaggtatgagtacagtcctcatcagactcccacacgatatcactgt
tactgtgggaaggaggcggagcctgcgcccgacccatggctcctcccacattcctgcgga
caggtgtgtggtcgtgagtttaaaccatcgtgtggccatcgctgcctgctgctgtgccat
ccaggcccctgtcccccctgcccacagatggtgagtgtgtcgtgtgtgtgtgggaaggcg
tctcgtgtccctcggcgctgcagtgctaaagcctggagctgcactcagatctgcagacgc
acactcccgtgcagaacacacacctgtgcaaacacctgtcacgcaggtgtgtgtgaggcg
tgcccgagggtcagtgtgcaggagtgtgtgtgtggcctgcggcgggcggagcggccctgt
gccagtccagagtggcactgtgaccaggtgtgtggccgcctgctgtcctgtgggaatcac
acctgtgagcgtgtgtgtcactccggtgtgtgtggagggtgtcctcgtgctgggaatcgc
tcctgttcctgcggcaagaccaagagtgtgttgccgtgtacggtcgacgtacccacctgt
ggagacacctgtgggaagaaactggactgtggtttacacacatgctcaatgcgctgccac
agagcagcctgtgagacctgccgacaggaggtggagaagacgtgtcgctgtggccgctac
accaaactcttgccctgtcataaagaatatctctgtgagtccaagtgcaacaagactcgg
acctgcagccgacaccagtgcaagagaaagtgttgtccggggaactgcccggcgtgtgac
atgagctgcgggcgaatgctgggctgcaggaaccacagatgcccgtctgtgtgccaccaa
ggcagctgttacccgtgccctgagatggttgaggtccggtgtgactgcggctctacggtg
atctctgtgccgtgtggacgagagagaagcacgaaacctcctcgctgtaaggagctgtgc
aggaagcctgcgctgtgccatcacgggtccctgcaggagcaccgctgccacgccggcccg
tgtcctccctgtgcgctggcgtgccggcgcccgagacccggctgtgcccacctgtgcccg
accccgtgccacgaccaggtgctggtcaaagctgcggaccgggctctgctggcgggtccg
tgggagaagccctcgactcctgcgtttgtgcaaaaggctcttccgtgtccgccctgcctg
gtgcccataccgacagcctgtctgggaaaacatgaggtgagtccggtcccgtgtcacgct
cgagggccgttctcctgtggtcggccatgtgggcggagtctagcatgcgggaaccacacc
tgcagtttagagtgccatcatgtgacctcagagtcagataacgctaaggccggtccggag
tgtgtgcagtgtgaggaggggtgttctaagccccgcccctcgggctgcccccacccctgt
gccctgccctgtcaccatggcaactgcccgccctgtgtgctaatggtgcgccagcgctgc
cactgcaggatctctaacctgtacatcgagtgtgtgaagttcacgactgctgataaacag
agcaaacagctgctgacctcctgccagaaccagtgtcccaaacagttgcgctgtgggcat
cgctgtaagctgcagtgtcacacgggtgaatgtgatcagagctgcagtcagagagtgaag
atcaagtgtccctgcaaacgcatcaaaaaggatttcccctgttctcgagcgaagaatgag
ctgctcacgtgtgacgagacgtgtggagaactgcagaagaaacacgcagaggcttgtgca
gcagaggaaagagccgcgctggaaggagaaatgagaaaacagcaggctgaactggaggca
tttgagaaacgacaaaaaggacgaaggaagaagagcaggaaagtctcagaggtggagact
gaggaaggggcgtggcacagatataagctccgcctcctcatgcccatctgtggcttccta
ttggctgtagcagccttctatctgctgcaactgaccaatgaggcgccagatggagagaac
ggacagtaa
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