Rhinichthys klamathensis goyatoka (western speckled dace): 130078440
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Entry
130078440 CDS
T09701
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4-like
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
130078440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
130078440
Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
130078440
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
TSP1_CCN
ADAMTS_CR_3
PLAC
TSP1_spondin
Motif
Other DBs
NCBI-GeneID:
130078440
NCBI-ProteinID:
XP_056099929
LinkDB
All DBs
Position
Unknown
AA seq
882 aa
AA seq
DB search
MRAALSISVAVILWPIFICLHTHTQRKIRSDPLTGSDGSRSRSWSSWGSWGSCSLSCGGG
VQERIRICRVAPSGSAPGQQRPQSLRHGWRQANRGISAGTYGYGRTSYVTPLLKDSGRTA
QNTRRRSALDVPLQSYRTQGRTVHLNRRAHTPAAQNRPYDAVPNASCPGAQNQHKICNAT
ACPSSSRPIRDVQCSSFNTQLFMGRLYQWEPFHDVSSDQGCELNCRAVGFRFYVRQSGRV
VDGTPCGHDGTSVCVAGKCQSAGCDDLLGSGKVPDKCGVCGGDNSACKLVSGLFQHSLAK
VGYHKIVEIPPGATKINVTEMVKSRNYLALLSRSGRSIINGNWAIDRPGMYEGVGTMFMY
RRPNEISSRSGESLLADGPTNEILDVYMIYQQPNPGVHYEFLMPSENAVDAQRPEETRLD
VNVVNGQTGSDANGRSTLEGHEGSGVKYPPPIPDNQLPEAPPSKRVREYNWKLSGSTDCS
ASCGRGSRYSVFVCVHRVTHTHVPIGLCDGNTKPSAQEEPCNVQPCPAFWDVGEWSECSK
TCGLGLQHRQVLCRQVYANRTLNTHSSRCHAERPETSSTCQLKICSEWQIRSDWSPCSVP
CGVGQRSREVHCVSNVGDIVADDECNMKLRPSDVENCDAGPCSKSWFFSEWSAQCSADCG
VGLRTRSVVCLSDHTSALPLEGCGSERPGETQSCNSGPCESHTEWVTGPWTQCSAECGVG
SQHRAVVCLMSSDEGFSVMPAFECSSLDRPISQKNCFVKTCAAKWFHTEWSECSKSCESG
YRVREVRCLSDDHMTSSLSDDHMTSSRSDDHMTSSDLCEQTLKPHEREECNPEPCLPLID
EKCRDKYFNCNVVVQARLCVYDYYQTACCVSCRRAENTRRRS
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgagagccgctctgagcatcagtgtcgctgtgatcctgtggccgatcttcatttgtctt
cacacacacactcagaggaagatccggtcggatccgctgactggttctgacgggtcgagg
tcgaggtcgtggagctcctggggttcgtggggttcgtgttcgctctcctgcggtggagga
gttcaggaacggatcaggatctgtcgggtcgctcccagcggatcagcgccgggccagcag
agaccgcagagcctcaggcatggatggagacaagcgaaccgtggcatcagtgcagggacg
tacggatacggcaggacttcatacgtaacgcctctactgaaggattctggccgaacagcc
caaaacacacggagacgatcggcattagacgtccctctccagagttacaggactcagggt
agaaccgtccatctgaaccggcgcgctcacacaccggcagcgcagaaccggccgtacgac
gcggtcccgaacgcctcctgccccggagcccagaaccagcacaagatctgcaatgccacg
gcctgtccgtcatccagcagaccaatcagagacgtgcagtgctcctccttcaacacgcag
ctcttcatggggagactgtaccagtgggaacctttccacgacgtgtcgagtgatcagggc
tgtgagctgaactgtcgggccgtcggcttcaggttctacgtccgtcagtcggggcgagtc
gtcgacgggacgccctgtggacacgacgggacatcggtgtgtgtggcgggaaagtgtcag
agcgccggctgcgacgacctgttgggttctgggaaggttcctgataaatgtggcgtgtgt
ggaggggataacagcgcatgtaagctcgtctcgggcctgtttcaacacagcctggccaaa
gtgggctatcacaagatcgtggagattccaccgggagccaccaaaataaacgtcacggag
atggtgaagagcaggaactatctggctctgctcagtcggtctggccgatccattattaat
ggaaactgggccatcgaccgtccaggaatgtacgagggagtgggaacgatgttcatgtac
cggcggcccaatgagatcagcagcagaagcggagagtcgctcctggccgacggcccgacc
aatgagatcctggatgtgtatatgatctaccagcaacccaatccaggcgtccattacgag
ttcctgatgccgtcagagaacgcagtcgatgcccagcgtccggaagagacccggctggac
gtaaatgttgtgaacggtcagacgggctctgatgcgaacggccggtcgaccctggagggt
cacgaggggtcaggggtcaagtatcccccccccatcccggataatcagcttcccgaagct
ccgccttcaaagcgagtccgggagtataactggaagctcagcggctccaccgactgcagc
gcctcctgtggcagaggtagcaggtactccgtgttcgtctgcgttcatcgggtcactcac
acacacgtgccgatcggtctgtgtgacggcaacaccaaacccagcgctcaggaggagccc
tgcaacgtccagccctgtcccgctttctgggacgtcggcgagtggtcggagtgcagtaag
acatgtggtttgggtcttcagcatcgccaggtcttgtgtcgtcaggtgtacgccaaccgc
acgctgaacacacactccagccgatgccacgcggagcggcccgagaccagcagcacctgc
cagctgaagatctgcagcgagtggcagatccgctccgactggagtccctgttctgtgccc
tgcggcgtgggtcagaggtcacgtgaggtgcactgtgtcagtaatgttggtgatatcgtg
gcagacgacgagtgcaacatgaaactgcgtcccagtgacgtggaaaactgtgacgcgggt
ccgtgttcgaagagctggttcttcagcgagtggagcgctcagtgctctgcggactgtggc
gtgggtctgcggactcgcagtgtagtgtgtctcagcgatcacaccagcgctctgcctctg
gagggctgcgggtccgagcggccgggcgagactcagtcctgcaacagcggcccctgtgag
agccacaccgagtgggtcaccgggccctggactcagtgctcagcggagtgtggcgtgggc
agtcagcacagggcagtggtgtgtctgatgagctcagacgagggtttctcagtgatgccg
gcgttcgagtgttcgtctctggaccgaccgatcagccagaagaactgcttcgtcaaaacc
tgcgcagcaaagtggttccacaccgaatggagcgagtgctctaagtcgtgtgagtccggt
taccgagtgcgagaggtgcgctgtctctctgacgatcacatgaccagcagtctctctgac
gatcacatgaccagcagtcgctctgacgatcacatgaccagcagtgacctctgtgagcaa
acactgaagccacatgagagggaggagtgtaaccctgagccctgccttcctctgattgat
gaaaagtgtcgtgataaatacttcaactgtaacgtggtggtccaggcccggctctgcgtg
tacgactactaccagacggcgtgttgcgtgtcgtgccggcgcgcggagaacacgaggcgt
cggtcatga
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