KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130078454
Entry
130078454         CDS       T09701                                 
Name
(RefSeq) F-box and WD repeat domain-containing 11-A isoform X1
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04114  Oocyte meiosis
rkg04120  Ubiquitin mediated proteolysis
rkg04218  Cellular senescence
rkg04310  Wnt signaling pathway
rkg04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    130078454
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    130078454
   04340 Hedgehog signaling pathway
    130078454
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    130078454
   04218 Cellular senescence
    130078454
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rkg04121]
    130078454
   03036 Chromosome and associated proteins [BR:rkg03036]
    130078454
Ubiquitin system [BR:rkg04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     130078454
Chromosome and associated proteins [BR:rkg03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     130078454
SSDB
Motif
Pfam: WD40 Beta-prop_TEP1_2nd WD40_Prp19 Beta-prop_TEP1_C WD40_WDHD1_1st WD40_CDC20-Fz EIF3I WD40_MABP1-WDR62_2nd Beta-TrCP_D Beta-prop_EML_2 WDR55 Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 F-box-like ANAPC4_WD40 Beta-prop_DCAF12 Beta-prop_IP5PC_F Beta-prop_SPT8 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st NBCH_WD40 WD40_like Beta-prop_DCAF4 Beta-prop_IFT140_1st F-box Beta-prop_HPS5 WD40_RFWD3 Beta-prop_WDR11_2nd Beta-prop_VPS8 Beta-prop_Nup120_160 Beta-prop_WDR19_1st WD40_2
Other DBs
NCBI-GeneID: 130078454
NCBI-ProteinID: XP_056099944
LinkDB
Position
Unknown
AA seq 523 aa
MSVMESQNNTDDISPKKTTVFKLGNGSVAGSRKRPSQGNYEKEKDLCIQLFDQWSESDQV
EFVEHLISHMCHYQHGHINSYLKPMLQRDFITALPAQGLDHIAENILSFLDARSLCSAEL
VCREWQRVISDGMLWKKLIERMVRTDPLWKGLSERHQWEKYLFKNRTNEVPPNSYYHSLY
PKIIQDIETIEANWRCGRHNLQRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIWDKQS
LECLKVLTGHTGSVLCLQYDDRVIVTGSSDSTIRVWDVGSGEVLNTLIHHNEAVLHLRFC
NGLMVTCSKDRSIAVWDMASATDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWS
TSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI
RFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSS
HDDTILIWDFLNVSTNGQSEGRSPSRTYTCLFYVPVCPGRAES
NT seq 1572 nt   +upstreamnt  +downstreamnt
atgtcggtgatggagtcacagaataatacggatgacatctcgccaaagaagacaacagtg
ttcaagttagggaacgggtcagtggcgggatcgagaaagaggccgtctcaggggaactac
gagaaggagaaagatctgtgcatccagctgtttgatcagtggtcagaatctgatcaggtg
gagttcgtggagcatctgatctcacacatgtgtcattaccagcacggccatataaactcg
taccttaaacccatgttacagagagacttcatcaccgcgttgccagctcagggtctggat
cacatagcggagaacatcctctcgtttctagacgctcgttctctgtgctcagctgagctg
gtctgtcgagaatggcagcgggtcatatcagacgggatgctctggaagaagctcatcgag
aggatggtgcgcacggacccgctgtggaaaggcctgtcagagcggcatcagtgggagaaa
tatttatttaagaaccgaacaaacgaggtcccacccaattcatactaccattcactctat
cccaaaattatacaggacattgagacgattgaggcgaactggcgttgtgggcgtcacaat
cttcagcggattcagtgccggtcagagaacagtaaaggtgtttactgccttcagtacgac
gatgacaagatcatcagcggcctacgagacaactccattaaaatctgggataaacagtct
ctggagtgtctgaaggttttgacgggtcacactggttcggttctgtgtctgcagtatgat
gacagagtcatagtgacaggatcctctgattctaccatcagggtgtgggacgttggttcc
ggtgaggttctcaacactctgatccatcataacgaggcggttctgcacctgcgcttctgt
aacgggctcatggtgacgtgttcgaaagatcgctccatcgccgtgtgggacatggcatcc
gccactgacatcagtctgcgccgcgtgctcgtgggtcaccgcgctgctgttaacgtggtg
gactttgacgacaaatacatcgtgtctgcgtctggagacagaaccataaaggtgtggagc
accagcacgtgtgagtttgtacggacacttaacggtcacaagcgtggcatcgcctgcctt
cagtacagagacagactcgtggtcagcgggtcttcggacaacaccatcagactgtgggac
attgagtgtggtgcttgtctgcgtgtgttggagggtcatgaggagctcgtgcgctgcatc
agattcgacaacaagaggatcgtgagcggagcgtatgatgggaagattaaagtttgggat
ttacaggcagctctggatcctcgggcccctgccagcacattatgtctgcgcacactcgtg
gagcattctgggcgtgtgttccgactgcagtttgatgagttccagattataagcagttcc
catgatgacacaatccttatatgggacttcctgaatgtctccaccaatggacagtcagag
gggcgatcgccctcacggacatacacgtgcctcttctatgtgccagtgtgtcctgggaga
gctgagagctga

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