Rhinichthys klamathensis goyatoka (western speckled dace): 130078530
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Entry
130078530 CDS
T09701
Symbol
ap3b1a
Name
(RefSeq) LOW QUALITY PROTEIN: AP-3 complex subunit beta-1
KO
K12397
AP-3 complex subunit beta
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
130078530 (ap3b1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130078530 (ap3b1a)
Membrane trafficking [BR:
rkg04131
]
Endosome - Lysosome transport
Others
AP-3 complex
130078530 (ap3b1a)
Endosome - Golgi transport
130078530 (ap3b1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3B1_C
AP3B1_C_2
Cnd1
HEAT_2
INTS1_R4
HEAT_GCN1
TFIIF_alpha
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
130078530
NCBI-ProteinID:
XP_056100041
LinkDB
All DBs
Position
Unknown
AA seq
1107 aa
AA seq
DB search
MLGMSANSVSYNEQGSVESGVDAAQENSNISSGGSGGAAFSLFSADCKKNDDLKEMLENN
KESLKLEAMKRIVGLIAKGKNASELFPAVVKNVASKNIELKKLVYVYLVRYAEEQQDLAL
LSISTFQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKESSTDLSPYVRKTAAHAI
QKLYSLDPDQKEHLIEVIEKLLKDKSTLVAGSVVMAFEEVCPDRIDLIHKNYRKLCNMLV
DVEEWGQVVIINMLTRYARTQFVSPWREDAVFDENSEKTFYDSEEERRVDESKTYVMDPD
HRLLLRNTKPLLQSRNTAVVMAVSQLYWHLAPKHEISIVTKSLVRLLRSHREVQYVVLQN
IATMSIQRKGMFEPFMKSFYVRSTDATHIKTLKLEILTSLANEANISTILREFQTYVKSQ
DKAFAAATIQAIGRCATNISEVTDTCLNGLVLLLSNRDETVVAESVVVIKKLLQTQPSQH
SDIIKHMAKLFDNITVPMARASILWLMGEYCEHVPKIAPDVLRKMAKTFTSEEDIVKLQI
INLSAKLYLTNSKQTKLLTQYILNLGKYDQNYDIRDRTRFIRQLIVPNEKSGALSKYARR
ILMAPKPAPVLQSAFKDRDRFQLGTLSHSLNSHATGYLELSSWPSVALTNQSEMWTVVEP
VKEALAPALGKSKRAKSDEKFYSGSEEEEEEEXEEGSSSEDSSSSSGESESDSKSEENSD
DSNKSSSSQSEKSSSESDTDKKKTQKNKKLQQKKPASKDRKLKNGKAANDESRSGSESDS
ESSSSESSSESGSESGLDSNSDSGTDQKRKTQSKTVQSKLVTKQAEKKEVSLLDLDDFSP
MPVTTPKSSIMSPSLLSDLQGLSISPSASALQASSPVFVPETSHELLHRMTGKGLSAQYR
FTRQPCIYGNSMVSLQLTLSNNSEQALENIHISEKSSSGQNIHRFSAIERLEPQASATVS
MGVDFNDSTQAAHFQLCTKEDEFSVSIQPAVGELLLPITMSEADFTKEQGKLVGMNESSA
TITTTPENISSQSVNRNVVSAANLGVIPSNQENIHRFAGKTVSSGSLVLVSVALKDPDAL
ITVNTEKTVIASMLLRQFKTALTIITP
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgctcgggatgtccgccaacagtgtgtcgtataacgagcagggctcggtggagtccggc
gtggacgcggcgcaggagaacagcaacatcagcagcggcggcagtggaggggccgcgttc
agcctcttcagcgctgactgcaagaaaaatgatgatctgaaggagatgctggaaaacaac
aaagagtctctgaagctggaggctatgaagaggatagtcgggttgattgccaagggtaag
aatgcatctgaactttttccagctgtggtgaagaacgttgcaagtaaaaacattgagctg
aagaagctggtgtacgtgtacctcgtccggtatgcagaggaacagcaggatctcgccctc
ctgtcaatcagcaccttccagcgggccctcaaggatccaaatcagcttatcagagcgagc
gctctcagggtcctgtccagtatcagagttcccatcatcgtccccatcatgatgctggcc
atcaaagaatcatccaccgatctttcaccttacgtccggaaaaccgccgctcacgctatt
cagaaactctacagtctggaccctgatcagaaggagcatctgatcgaagtgattgagaaa
ctcctgaaagacaaaagcacgctggttgccggcagcgtggtgatggcttttgaggaggta
tgtccagaccggatcgatttgatccataagaactatcggaagctgtgtaacatgctggtg
gatgtggaggagtggggtcaggtcgtcatcataaacatgctgacacgctacgccaggacg
cagtttgtgagcccgtggagagaggatgcagtgtttgatgagaatagcgagaaaaccttt
tacgattctgaggaagagaggagagtggacgagtccaaaacgtacgtcatggatccagac
cacagactcctgctcagaaacactaaaccactgttacagagcagaaacactgcagttgtg
atggcagtatctcagctctactggcatttggcccctaaacatgaaattagcatcgtcacc
aagtccctggtgagactcttgaggagccacagggaagttcagtatgttgtgttgcagaac
atcgccaccatgtctattcagaggaaggggatgtttgaacccttcatgaagagcttctat
gtgaggtctacagatgccacacacatcaaaacactcaagctggagattttaactagcctg
gctaatgaagcaaacatctccaccatactgagagaattccagacatacgtgaagagtcag
gataaggcatttgcggcggccaccatccaggccatcggccggtgtgccactaacatctct
gaggtgaccgacacctgcctcaacggcctggtcctgctgctgtccaacagagacgagact
gttgtcgcggagagtgttgtggtcatcaagaaacttctgcaaactcaaccatcacagcac
agtgacatcatcaaacatatggccaaactcttcgacaacatcactgtcccaatggcgagg
gccagcatcctgtggctgatgggtgaatactgtgaacatgtgcctaaaatcgcccctgac
gtcctgcgaaagatggccaagacctttactagtgaggaggacattgtcaaactgcagatc
atcaacttgtctgccaaactctacttgaccaattccaaacagacgaaattgttgactcaa
tacatattgaacttgggcaagtacgatcagaactatgacatcagagaccgaacacggttc
attcgtcagttgattgttccaaacgagaagagcggagccctgagcaaatacgctcgtcgg
atcctgatggcgcccaaaccagctcctgttttgcagtctgcctttaaagaccgagatcgt
tttcagcttggcacgctctctcattcgctcaattctcatgctactgggtacctggagctt
tctagttggccgtctgtcgctctgaccaatcagtcagaaatgtggacggtagtagaaccg
gtgaaagaggccctggcaccagcgcttggtaaatccaaacgtgctaaatcagatgagaag
ttctactctggttctgaggaggaagaggaggaggagngggaagagggaagcagtagtgag
gacagtagtagcagtagtggagaatcagaaagcgattcgaagagtgaggagaacagcgat
gattcaaacaagagcagctccagccaatcagagaagagctccagtgaatcagacactgac
aagaagaaaactcagaaaaacaaaaagctacaacagaagaaaccagccagcaaagacagg
aagctgaagaatgggaaagctgcaaatgacgaatccagatccggaagtgaatcagactct
gagagttcctcgtcagagagctcgtctgaatccggatcagaatctggactggattcaaat
tcagactcgggaacagatcagaagagaaaaacacagtctaaaactgtccagtccaaactg
gttacaaagcaggctgagaagaaggaagtgtctctccttgatctggacgacttctcgccc
atgccggtgaccacacccaagagctccatcatgtctcctagtcttctgtctgacctgcag
gggctctcaatctcacccagcgcatcggccttacaggcgagttctcccgtgtttgtgccg
gaaacctcccatgagctgctccacaggatgactggtaaaggtctgtccgcccagtaccgc
ttcacccgccagccctgtatctatggcaacagcatggtgtccctgcagctgacactgagc
aacaacagtgagcaagccctcgagaacatccacatctctgagaagagttccagcggacaa
aacatccaccgcttcagcgctatcgagcgtttggagccgcaggcgtcagcaacagtgtcc
atgggtgtggacttcaatgactccacacaggctgcacacttccagctatgtactaaagaa
gatgaattcagcgtgtccatccagcctgcggtaggagagctgctactgcccatcacaatg
agtgaagcagacttcaccaaagagcagggtaaactggtgggcatgaacgagtcatcggca
acaattacaacaacgccagagaacatctccagccaatcagtaaacagaaatgtggtgtct
gccgccaacctaggtgtgattccatccaatcaagagaacatacacaggtttgctggtaag
acggtgagttctggttctctggtcctggtgtcagtcgccctgaaggatcctgatgctctg
atcaccgttaacaccgagaaaaccgtgatcgcctctatgcttctgagacagtttaaaacg
gccctgacgatcatcaccccctag
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