Rhinichthys klamathensis goyatoka (western speckled dace): 130078560
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Entry
130078560 CDS
T09701
Symbol
gigyf1a
Name
(RefSeq) GRB10-interacting GYF protein 1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130078560 (gigyf1a)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130078560 (gigyf1a)
Surveillance factors
Other surveillance factors
130078560 (gigyf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
GYF_2
SPIN90_LRD
Motif
Other DBs
NCBI-GeneID:
130078560
NCBI-ProteinID:
XP_056100082
LinkDB
All DBs
Position
Unknown
AA seq
1011 aa
AA seq
DB search
LRALSSGGSVSSPPASPAMPKYKLAEYRYGREEMLALYVKENKVPEEMQDKEFATILQDE
PQQPLALLALTEEEQRNFSMSVNSVAVLRLMGKGGGAAPAGVTRGRGTVRGGRGRGRGEG
GFYQRSVEEVEGGFGRSVREIHRSQSWDDRSERRFEKPLRRDVVRLGFEEAAPVGRKEFM
RSDSDNWRTLREEQEEEEAAEAGGSWRITGVRREDGGPRSAGWREHTGPGEPLRQRKFDF
DFRDGGNEGGRRRTGSDGAEDERDGLPEWCTDEEDGEMGTFDSSGAFMCIKKGPKDPILE
EEFEFQGLEDEEEDCANLEKNNGTGAVKSEKDVIDFAPVSETEVKAVSPSPPPSLPPSLP
APVPEALPSAAPSGLEEPQPVPSIPNKLPSEVLSEAMLDLSPSASSSLPSSPPSSSSAAT
DLPPPGGDIEDDEGMKHLQQEAEKMVAALQDTSLEEECFTQTLQESRNTASALPLSHDSA
MKWFYKDPQGEIQGPFSTVEMCEWFQAGYFAMNLLVKRGCDEGFQPLGEVIKMWGRVPFA
PGPSPPPLLVRNQAHLRPQPPRGAIGNMDQERLKKQQELAAATALYQQQLFQLINRCGEQ
GMMPSLNRSMSVPDTGSMWDMHTSASQPAGGEASLWDLMNSSTQGPILEQIQKLQERREA
ELLRAKREEEERKRRDDKRREEQKRREEEELYRRKQQQDLLMKLLQQAPRQGSSGSGSGW
SGGPIPGLGKQTKPHNLLDIQPEAERMHKQQHRVQQQQRWSDSSSLWGASGSLDGKVGGG
GSPSGGGMGVWDEALKNQSALRNNMGLKNSRSSPSLSEQYMMRSRKRTEEEDRLLKLLQG
MKSQDGFTTWCEQMLHALNTSANNSSSSQDVPTIVAYLKEVESPYEVLNFICSYLGDTVE
AKEFARQFLERRAKQKANHQRQQQQLSKEMAGLSMNNFPLQDTVRGMNPSTLQSMFQAVH
SGKGGAVYDQAAKLKKKQPMMLHSDPSILGYSFHGGPDRYGLNEMEMVEDY
NT seq
3037 nt
NT seq
+upstream
nt +downstream
nt
gcttcgagcactttccagtggaggcagtgtgtcttcccctcctgcctctcctgctatgcc
aaagtacaagttggccgagtaccgttacggccgagaggagatgctagcactttatgtcaa
agaaaacaaggtccctgaagaaatgcaggataaggagtttgctactattctgcaggatga
gcctcaacagccactggcactgttggctctcactgaagaggagcagaggaatttctccat
gtctgtcaacagtgtggctgtactgaggcttatgggtaaagggggcggagccgccccagc
tggggtgactcgaggtagaggcactgtgcgaggtggtcgaggtcgaggaagaggagaggg
cggattctaccaaagaagcgttgaggaagttgagggcggttttggtcgtagcgttcgaga
gatccatcgcagccagagctgggatgacagaagtgagcggcgttttgagaaacctctgcg
gagggacgttgtgcgtttgggtttcgaggaagcggctccagttggcagaaaggagttcat
gcgctctgatagcgacaactggcgcacgctgagagaggagcaggaggaggaggaagcggc
ggaggctggcggcagctggagaatcactggcgtacgaagagaagatggtggccctcgctc
ggctggttggcgggaacacactggtccaggtgaaccacttcgccagaggaagttcgactt
cgacttccgggacggagggaatgagggaggcagaaggagaaccggcagcgatggagcaga
agatgagcgagacggtctgccagagtggtgcactgatgaggaagatggagaaatgggaac
ctttgattcttctggagcgtttatgtgtattaagaagggtccgaaagaccccatcctaga
agaggagtttgagttccagggcttggaggatgaggaagaggactgtgctaatctagagaa
gaacaacggcactggtgctgtaaaaagcgagaaagatgtcattgacttcgctccagtgtc
tgaaactgaagtgaaagcggtttctccttcccctcctccttctctccctccctctcttcc
tgctcctgtccctgaggctttgccctctgctgccccctctggcctggaggagcctcagcc
tgtcccctccattcccaacaaattaccaagtgaagtgttatcagaggccatgttagattt
gagccccagtgcctcctccagtctgccttcatcgcctccctcttcgtcctctgctgctac
tgacctcccaccgccggggggtgatattgaggatgacgagggcatgaagcacctgcaaca
ggaggcagagaagatggtggcagcgctgcaggatacatctctagaggaagagtgtttcac
ccagactcttcaggagagcagaaacacagcctctgctcttcctctctcccatgactctgc
catgaaatggttttacaaagacccgcaaggagagattcagggtccgttcagtacagtgga
aatgtgtgaatggtttcaggcgggctatttcgccatgaacctgcttgttaaacgtggttg
tgatgagggatttcagccgctgggggaagtcattaagatgtgggggcgtgtgccttttgc
ccctggcccctcccctccgcccctcctggtgaggaatcaagcccatcttcgccctcaacc
accccggggggcaatcggtaatatggatcaggagcggctgaagaagcagcaggaattagc
agctgccacggctctttaccagcagcaactgtttcagctcatcaacaggtgtggagagca
gggtatgatgccttcgttaaacaggtcgatgtcagtgccagatacagggtccatgtggga
catgcatacctcagcctcacagccagcaggcggtgaggccagtctatgggacttaatgaa
ttcttcaactcagggtccaattctagaacagattcagaagctacaagagagaagagaagc
tgaactactcagggccaagcgtgaggaagaggaaaggaaacggagggatgacaaaaggcg
agaagagcagaaaaggagagaggaggaggagctttataggcgcaagcagcagcaggattt
gctgatgaagttgctccagcaggctccgcgtcagggctcctcgggctccgggtcgggctg
gagcggaggacccatccctgggctgggaaagcagaccaaaccccacaacctcctggacat
ccagccggaggcggagagaatgcacaaacagcagcatagagtccagcaacagcagaggtg
gagtgattcctcttcgttgtggggagcatctgggtctttggatggaaaggtgggtggtgg
tggaagcccctcgggaggagggatgggcgtctgggacgaggccctcaagaaccagagcgc
tcttcgcaacaatatggggctgaagaacagccgcagcagtccctcactgagcgagcagta
catgatgaggagccgtaaacgcactgaggaggaggatcggctgttgaaactcctgcaggg
gatgaagtctcaggacggcttcaccacctggtgtgaacagatgctgcatgcgctcaacac
ctccgccaataactcctcctcttcccaggatgtgcccaccattgtggcgtacctgaagga
ggtggagtctccgtatgaggtgttgaactttatctgctcctatctgggcgacactgtcga
agccaaagagttcgccagacagttcctggagcgccgtgccaaacagaaagctaaccacca
gagacagcagcagcagctctccaaagagatggctggacttagcatgaacaacttcccact
gcaggatactgtacgaggaatgaaccccagcactctgcagtctatgttccaggcagtgca
ttctgggaagggtggtgcggtctatgatcaggcagcaaagctgaagaagaaacagcccat
gatgctgcactctgacccaagcatcttagggtactcattccatggtggccctgatcggta
tggtctaaacgagatggagatggtcgaggattactga
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integrated database retrieval system
