Rhinichthys klamathensis goyatoka (western speckled dace): 130078601
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Entry
130078601 CDS
T09701
Symbol
trim66
Name
(RefSeq) tripartite motif-containing protein 66 isoform X1
KO
K12032
tripartite motif-containing protein 66
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130078601 (trim66)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130078601 (trim66)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
PHD
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
130078601
NCBI-ProteinID:
XP_056100139
LinkDB
All DBs
Position
Unknown
AA seq
1102 aa
AA seq
DB search
MEKCCSECSEPRMAQSLCTFCNKWLCFQCTDLHQHERVSTQPSDLQHQPRDPPSPSEIGA
GCCGHAVVMCPLHKQEPLELLCETCDLMACSICHLSAHKDHRLVHVGKALQDQRWLLQNL
MARVEEKRSTVESTAKQIQGRLHGIKITQRKAENQIKMAKMIMMNELNKRANLLIEQLES
ISSDFKQRLEDQLQGAIELCSQLEHVQNFFTWATAHHRRNPLLFSKELIALQMQQLLEPL
MLSEAWTPLKIKFNWDASFWTKQMSTLGQLVVEGGSRSYSEVVGHPSILRPQPVPCIAMP
PLCHAVREPGCACQTFCQPQLCCLHCRPTQSVPLDKFPAPCPQATRRSSPPSLHSCWESD
ASVPMHPTGAQPIQQSTSHPGSDLVQHESSSALPRQPVGSNDHPLPEALPANSNQTVMDG
RNCAPDQSPNGRGQTCAPEADTRQEASPDRELPQVHNQARVQTTTETSNQPMVELQPVVA
RIDDDRRSSALEMYALAQGRGGDRRSCSGSKRATRSQSTAVGPRGPRKRLCKDRPARAAH
SLATVAGDQGCTTQQQVCARFDDSEMIPGRISSHNASTLTTYKSEPDNVYAYAYENRRLN
TRKSRMPREDPDTSDKEAPDGSKVPVVCLERLKILVSRHPPQNHQSTEITCQTESGLKPE
ETVLRVLEREVTSQGTLDKESVQPEDSVSPTEQLSPEHLYSCESSVSLEVSQPPVQEFCN
LNQESRVLAISNDSDPVLQPDTEEIHFPSELRSVTDSDFQTESTREAEPGSDADMESELL
QESDPSAESELQVESESDVISEQPPESVLSGSEQEFESDPDSTAEVTVNLEPESEWEAEP
PVLQPATGSENVSEPAVEHQPAEERPEIENEDFCAVCLIGGDLLCCDRCPKVFHLSCHVP
PLHSFPIGDWICTLCRDLEQPEVEYDCENVQMSTGTMPYGLSACDQKKCEKLTLLILSNI
LSAPFHEPVSPLARHYYQIIKKPMDLSVIRNRLSRNSHTHYLSPQEFVADVLLMFKNCAK
FNYPDSEVAQAGHSLQSFFTSKLREVFPDLTCPVQEEEDSDIDDYEELEQAMVTGFPWPE
RREQSHRKRKRRHSLNWRRNHY
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtgctgttccgagtgttcagagccccggatggcacagagcttgtgtaccttc
tgcaacaagtggctgtgcttccagtgcacagacctgcaccagcatgagagagtctccact
caaccctctgatctgcagcaccagccacgagaccctccgtcaccgtctgaaataggagcc
ggttgctgcgggcatgctgttgtcatgtgtcctctccataaacaggagcctctggaactc
ctgtgtgaaacgtgcgacctcatggcctgcagcatctgtcacctgtccgcccacaaagac
caccggctggtgcatgttgggaaagctctgcaagaccagcgctggctcctgcagaacctc
atggcccgagtggaggagaaaagatccactgtggagagcaccgccaaacagatccagggc
aggctccacggtataaagatcacgcagaggaaggcagagaaccagataaaaatggcaaag
atgattatgatgaacgagcttaacaaacgggccaacctattaatagaacaactggagagt
atatccagtgatttcaagcaacgtctggaggaccagctgcagggggccatagaactgtgc
agccagctggagcatgtgcagaacttctttacctgggccacggcccaccacagacgcaat
ccgctgctattcagcaaagagctgattgctcttcagatgcagcaattactggagccactg
atgctctcagaggcttggaccccattgaaaatcaagtttaactgggatgccagcttctgg
accaagcagatgtccactttaggtcagctggtcgttgaaggtggaagtcgttcatactca
gaggttgtgggtcatcccagtatcctgcgaccccagcctgtcccatgcatagcaatgcct
ccactgtgccatgcggtgcgggaacctggctgtgcctgccagaccttctgccagccccag
ctctgctgccttcactgcagacctactcaatccgtccctttggataaattccctgccccg
tgtcctcaagccaccaggcggagctccccaccgtcccttcacagctgttgggagtctgat
gcatctgtccccatgcatccaactggtgctcagcctatacagcagtccacctctcaccct
ggatctgacctcgtccagcatgaatccagctctgctttgcctcggcagcctgtcggatcc
aacgaccacccgctgcccgaggcgctccctgctaattccaaccagactgtcatggatggg
agaaactgtgcaccagaccagtctcctaacggaagagggcaaacatgtgcacctgaagca
gacacaaggcaagaggcatcaccagacagagagctcccacaggtccacaaccaggctcga
gtgcagacgaccacagaaaccagcaaccaacccatggttgaactgcagcctgtcgttgct
cgcatcgatgatgacaggagatcctcagcgctagagatgtacgcgctggctcaaggccgg
ggaggtgaccgtcgaagctgctctggttcgaagagggcgacccggtctcagagcactgcg
gtaggaccccgaggacctcgtaaaaggctctgtaaagacaggccggccagggctgctcac
agcctggcaacagtggctggggaccagggatgcacaacgcagcagcaggtctgtgcacgt
tttgatgattctgagatgatcccgggacgtataagcagtcacaatgcgtccacgctgacc
acctacaagtctgaaccagataatgtatatgcatatgcctatgaaaacagaaggctgaat
accagaaagagcagaatgcctcgagaggatccagacaccagtgacaaagaagccccagat
ggttctaaggttccagttgtgtgtcttgagcgactcaagatcctggtatcacgacatcca
ccacagaaccatcagagcacagaaattacttgtcagacagagtctggactcaaacctgaa
gaaactgtcttgagggtgctagaaagagaggtcacttctcagggaacattggataaggaa
tcagttcagccagaggacagcgtgtcgcccacagagcagctatcaccagaacatctgtac
agttgtgaatcatctgtctcccttgaggtttctcagcctcctgtgcaagagttttgcaac
ctaaaccaagagtccagggtactagccatctccaatgattcagatcctgtcttacaacct
gacactgaagagatacacttcccatctgaactcagatcagttacagattctgatttccaa
actgaatccacaagagaggctgaaccaggttcagatgcagatatggaatcagagctcctg
caggaatcagatccgagcgctgaatctgaactgcaagtcgaatccgaatcagatgtcatt
tcggagcaacctcctgaatcagtgctctcgggttctgaacaggaatttgaatcagatccg
gattccacagccgaagtgactgtgaatcttgaacctgagtctgaatgggaggcggagccg
ccggttctccaacctgccactggctctgagaatgtatcagaacctgctgttgagcatcag
cctgcagaggaaagacctgagatagagaacgaggacttctgtgcggtctgtctcatagga
ggagaccttctgtgctgtgaccgttgcccaaaggtctttcacctgtcatgccacgttccc
ccactccatagttttcccataggtgactggatttgcaccctgtgcagggacttggagcaa
ccagaggtggaatatgactgtgagaatgtccagatgtccacaggcacgatgccatatggg
ctgtcggcgtgtgaccagaagaaatgcgagaagttgacgctgctgatcctcagcaacatt
ctcagtgctccgttccatgagcctgtcagccctctggcccgtcattattatcagatcatc
aagaaacccatggatttgtctgtcatccggaacaggctcagcagaaacagccacacacac
tatctttcccctcaagagtttgtggctgatgtcctgctcatgttcaaaaactgtgccaag
ttcaactaccctgactcagaggtggctcaggcaggccacagtctacagtccttttttacc
tccaaattgagggaggtgttcccagatctgacctgccctgtccaggaggaggaggactct
gacattgacgattacgaggagctggaacaagccatggtgactggatttccctggcccgag
agaagagagcagagccacagaaagaggaagaggaggcactcactaaactggaggagaaat
cactattag
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