Rhinichthys klamathensis goyatoka (western speckled dace): 130078651
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Entry
130078651 CDS
T09701
Symbol
frmpd1b
Name
(RefSeq) FERM and PDZ domain-containing protein 1
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
130078651 (frmpd1b)
Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
Other domain-containing proteins
FERM domain-containing proteins
130078651 (frmpd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FERM_M
PDZ
RA_2
PDZ_6
PDZ_2
FERM_C_FAK1
FERM_f0
Motif
Other DBs
NCBI-GeneID:
130078651
NCBI-ProteinID:
XP_056100202
LinkDB
All DBs
Position
Unknown
AA seq
1662 aa
AA seq
DB search
MEESERSRSRSPRRVGRVEQVVGKWLRRSRDSLSRERILGGRRSRSGDSGQQNFPVKVTV
EVIRDSVLDSHGFSLSAQLPLLVRDVTAGGPADGQLFPGDQILKVNNKVVEDLSPENTER
MIRDCQDSVTMTILRNMTNPKSSFITAEKRARLRRNPVKVRFAEEVVVNGHTQGNSLLFL
PNVLKVYLENGQTKAFKFKKTTTVKDIVLTLKERLSIRSIEHFSLVLEQQYSITKLLLLH
EDELIQKVVQKKDSHDYRCLLRVCFIPRDPMELLQDDPVAFEYLFHQSVGDVLQERYAVE
MKCNTALRLAALHMHEKLASCGQTTRASVKSVVKEFGLESFISPTLLRNMREKDLRKALN
HHMKKIQSLLEPRQKVISASQARLAYLTQMAELMSYSGRSYSATMLLQDRESLVSLLVGA
RYGISQILNHQLNMISTIIDFHYITRIEVLSESDRVSMVKIYLQDIQPIALLMESVAAKD
LSCLLAGYCKLLVDPNINVFRWGPRPKMRRIPAEEGYVSRCGSDSEDCSEDDYAMEGLLD
TEDTISTHTNDGTEEGEEAEGKSEAKAERVRVIVTHPFLEDEGDEASKTESVGDEDYAMR
MDALLETGWYTDPRVNSSFSSLSSNSLNALEESIKAAIGGLGHMDASLEEKPSSGLVSGA
SSLDVHHPYLLEVSERLHERGSSNKPGRPCDLTYDNHSGMCFSELSQMSDSLPSPPAASD
DALSEEDDDDDGHISTMSAEFEAVLASCTANSINAKLAGVNFQALFTRIHNNPACRQEGN
SFPKNQANEAKPQGPSSKIIAQSVLKRTVPSDVPEKTKGSRDSYSSEDEFYDAQDRFTPP
ITDQGLTEKSSDSQNMHPSLSIYDIKVIVDGTKAPESRDSKEEDSAAAEDLKEKPSLANH
VTPLIPESKNPELEVHQPSMILPPKPTPVEPKPFSANHSTGQKAQHCNGDIPGRNAHLLE
MEPETMEFKPVTGPGPPMSSSLITAVRQSTLPQQNLVDLETLQNGPRPQNGISDHIPACL
ENKTTPNLVDLEGLDSQDIKPSQKEPTNAKGTTEFGKITADKKGPLQQRSSDSLETIKTE
NKVFLMNTKPPIPPKPSFIVLQPPSKAVDAQLQKPEEKAKVPPNGLSLHPWSQRNGTSTS
PPSTLSKGVSLSHENLRTELKAKSSTVKPTSASTTPTPSPSPLPSPSVQSVNIVPEDPTQ
TGTSFPSRTGSSGRLSATALRGKIQDMPWYLTRSQEILGTVALSNTISSTGNKATNGTGV
NHELKVSPKATSVPSLIDWKEKDAEVVIVKLKDGPEEVSTTPVKDTNGKPPMSSSHPDLR
QKLSTEAPELHRHFGTCKSEQPQSHKDNPSEIRLDNASPLSSTNRDACGCHTVYANCFSG
DTEDNCGFDDDLTVYEFSRRNQISKPPQPTPGASPATLSGPSPNVLSLLRDSPRPLSTSS
ELSPLLIPPRPLESLTLDHYGPIDNPLSFLQGRHYVTSQKGAGLKDGYACLQRDINELLL
VLKKGPSTVHPLTHKGECKNDNVNRHSLSETERCLVQTEARRLASGCQRATRVGWAPDDA
LLSLGNSFGALVQLASTCMRVPCSDCGGCHGDIDADEALGKLEEIVDLYKEFVGAVETAR
EGEGVRLLAKQCTVLISTVFSLTQLFRTRTPDIDNGNVPLNF
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagcgagagaagcagaagtcgatctcctcgtcgggtcggtcgggtcgagcag
gtcgtggggaaatggctgcggcgttcaagagactctctcagcagggagcgtattttagga
ggcaggaggtctcgctccggggattcgggccagcagaacttcccagtgaaagtgacggtg
gaagtgatccgagactctgtcctggactctcatggtttcagtctctcagcacagctcccc
ctgctggtcagggacgtcactgcaggaggcccagcagacggacagctttttcctggagat
cagatcctaaaagtaaacaataaagtcgtagaagatctttcccctgaaaacacggagcgg
atgatcagggattgccaggactctgtaaccatgacgatcctcagaaacatgacgaatccc
aagtcttcattcataaccgcagagaagagagctcgcctgagaagaaaccccgttaaagtg
cgctttgcagaagaggtggtcgtcaacggacacactcagggaaactctcttctcttcctt
cccaacgtcctgaaggtttacctggagaacggccagaccaaagccttcaagtttaaaaag
accaccactgtcaaggacatcgtgttgactctgaaagaaaggctgtccattcgctcgatt
gagcatttctcactggttctggaacagcaatacagcatcactaaactactgttgctgcac
gaggacgagctcatacagaaggtggtgcagaagaaggattcgcacgactacaggtgtctg
ctccgggtctgcttcatcccccgagacccgatggagctcctgcaggacgatcccgtggcc
ttcgagtacctcttccaccagagtgtgggagatgtgttacaggaacgctacgctgtagag
atgaaatgcaacacagcgctgagactcgccgctcttcacatgcacgagaaactggcgagc
tgcggacagacgaccagagcctctgtcaagagtgttgttaaggagtttggcttagagagc
ttcatctctcccaccctgctgaggaacatgagagagaaagatctgcggaaagccctcaat
caccacatgaagaagatccagtcactgctagaaccacggcagaaggtgatttctgcgtct
caggcccggctggcctatctgacccagatggcggagctgatgtcgtacagcgggagaagc
tacagcgccaccatgctgctgcaggacagggagtcgttggtgagtttgctggtgggagcg
agatacgggatcagccaaatactaaaccaccagctcaacatgatctccaccatcattgac
ttccactacatcacccgaatagaagtgctctcagagtctgacagagtcagcatggtgaag
atttacctgcaggacatccagcctatagccctgttaatggagtccgtagcagcgaaagac
ctgtcctgtctcctggccggatactgcaaactgctggtggacccaaacatcaatgttttt
cgctggggaccgagacctaaaatgcgacgcattccggcggaagaagggtatgtttctcga
tgtgggagcgattcagaagactgttcagaggatgactatgccatggagggactgctggac
actgaagacactatatccactcatacaaatgatggaacggaggaaggagaggaagccgag
gggaaaagcgaagcgaaagcagaaagagtcagagtgattgtaacacatccctttttagag
gatgaaggagacgaggcgagcaagacagagtctgttggagatgaggattacgccatgaga
atggacgcccttttggagactggatggtacacggaccctcgggtcaacagcagcttttcc
agtttgtccagtaactcgttgaatgcactagaggagagtatcaaggcagccattggtggg
cttggccatatggatgcctctctggaagaaaagcccagttccggtcttgtatctggggcc
tcgagtctggatgtccatcacccttacctcttagaggtgtcagagcgtttgcatgaaagg
ggcagttcaaacaaacccggacggccttgtgacctgacctacgataatcactcaggtatg
tgcttctctgaactctcccaaatgtcagacagcttgccaagtccgcctgcggccagcgac
gatgcattgagcgaggaggacgatgacgatgacggtcacatttccaccatgtcagcagaa
tttgaggcagtgttagcctcctgtaccgctaacagcataaatgctaagttagcaggagtg
aactttcaggctctcttcaccaggattcacaacaatccagcatgtagacaagagggaaac
agcttcccaaagaaccaggcaaatgaagctaaaccacagggaccatcttcaaaaataata
gcacaatctgtgctgaagagaactgtgccctcagatgtccctgaaaaaacaaagggctct
agagacagttattcatcggaggatgaattttatgatgcccaagatcgatttacccctccc
atcacagaccaaggcctcacagagaaaagctcagattctcagaacatgcatccttcgctt
agcatttatgacatcaaggttattgtggacgggacaaaagctcctgaatccagagatagc
aaggaggaggacagtgcagcagcagaggacctcaaagaaaaaccttcacttgccaaccat
gtcacccctctgatccctgagtctaaaaaccctgaattggaggtccatcagccctcaatg
attttgccccctaaacctacacctgtggagcctaaacctttctctgctaaccactctacg
ggtcagaaagcccagcactgcaatggggacatccctggccgaaatgctcaccttctggag
atggagccagaaaccatggagtttaaaccagtcacggggcctggaccaccaatgtcttcc
tcactaattactgctgtacgccaatctacccttccccagcagaacttagtagacctggag
actcttcaaaatggacccagacctcaaaatggaatatctgaccatatcccggcctgtcta
gaaaataagactactccaaatcttgtggatcttgaaggacttgatagtcaagacattaag
ccaagtcagaaagagccaacaaatgccaaaggaacaactgaatttgggaaaataacagca
gacaaaaagggtcctctacaacaacgatcatcagactcccttgaaactataaaaacagaa
aataaagtcttcctgatgaacacaaagcccccaattcctcccaagccgtcattcattgtt
ttacagccaccctcaaaggcagttgatgcccagttacaaaaacctgaggaaaaggcaaag
gttccccctaatggtctttctctacacccctggtctcagagaaatggtaccagtacttcc
ccaccctctacactgagtaagggtgtttctcttagtcatgagaacctaagaactgaacta
aaggctaaaagctctacagtcaaaccgacaagtgcttcaaccactcctaccccatctcca
tctcccttaccttctccctcagttcagtctgtaaatattgttcctgaagatccaactcaa
accgggactagtttccccagcagaacaggctcgtccggacgtctgtctgccacagccttg
cgtggaaaaattcaagatatgccctggtacctcacccgttcccaagagatcttggggaca
gtagcactcagcaacactatttcatcaacaggtaataaagcaaccaatgggacaggtgtg
aatcacgaattaaaggtatcccccaaggccacttcagtgccatctttgattgactggaaa
gagaaagatgctgaagtagtcattgtgaagctcaaagacggaccagaggaagtgtccaca
actcctgtgaaggacaccaatgggaaacctccaatgtcgtcaagccatcctgacctaagg
caaaaattgtccactgaagccccagagttgcaccggcattttgggacctgcaagtccgaa
caacctcagtcacataaagacaacccttcagagattcgacttgacaatgcttcccctttg
tcctccacaaaccgtgacgcatgtggctgccatacagtctacgccaactgtttcagcgga
gatacagaggacaactgcggctttgacgatgatctgaccgtatacgaattctcccgtcga
aaccagatcagtaaaccacctcaacccactccaggtgcctcccctgcaaccctctctggt
ccctctccaaatgtcctatccctactcagagattcccctcgtcccttatccacatcctca
gaactcagtccactcctgatcccgcccagacctctggaatctctgactctagaccactac
ggaccaatagataatcccctcagctttctgcaaggccgccattatgttaccagtcagaaa
ggtgcagggcttaaagacggctatgcctgtttgcagcgagacattaatgaacttctttta
gtgttgaagaaaggaccttctactgtacaccctctaacccacaagggggaatgcaaaaac
gacaacgtgaataggcattcgctttcagaaaccgagagatgcctggtccagacggaggca
cgaaggttggcatcgggatgccagagagccacacgggtaggatgggcacctgacgatgct
cttctgtcactcggaaacagctttggagctctagtgcaacttgcctcaacctgcatgcga
gttccctgttcagactgcggaggatgtcatggggatattgatgcagacgaggcgcttggg
aagcttgaggagatcgtggacctgtataaggagtttgtaggtgctgtagaaacagcaaga
gagggcgagggtgtcagactcttggccaagcagtgtacggttctcatctcaacagtcttc
tcgctcacacaactgtttcggacacggacaccagacatagacaatggaaatgtacctctg
aacttttaa
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